RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 BMP3P12645 472 aa2.01□□□□□ -2.09
RNU6-539P-201ENST00000516665 LMO1P25800 156 aa2.01□□□□□ -2.09
RNU6-539P-201ENST00000516665 DZIP3Q86Y13 1208 aaKnown RBP2.01□□□□□ -2.09
RNU6-539P-201ENST00000516665 MARCH10Q8NA82 808 aaPredicted RBP2.01□□□□□ -2.09
RNU6-539P-201ENST00000516665 GIMAP7Q8NHV1 300 aa2.01□□□□□ -2.09
RNU6-539P-201ENST00000516665 CABLES1Q8TDN4 633 aa2.01□□□□□ -2.09
RNU6-539P-201ENST00000516665 CEP41Q9BYV8 373 aa2.01□□□□□ -2.09
RNU6-539P-201ENST00000516665 XYLT2Q9H1B5 865 aa2.01□□□□□ -2.09
RNU6-539P-201ENST00000516665 SLC5A6Q9Y289 635 aa2.01□□□□□ -2.09
RNU6-539P-201ENST00000516665 TCAF2A6NFQ2 919 aa2□□□□□ -2.09
RNU6-539P-201ENST00000516665 TRIM13O60858 407 aa2□□□□□ -2.09
RNU6-539P-201ENST00000516665 LILRB3O75022 631 aa2□□□□□ -2.09
RNU6-539P-201ENST00000516665 TMEM253P0C7T8 217 aa2□□□□□ -2.09
RNU6-539P-201ENST00000516665 NEUROD1Q13562 356 aa2□□□□□ -2.09
RNU6-539P-201ENST00000516665 CPSF6Q16630 551 aaKnown RBP eCLIP2□□□□□ -2.09
RNU6-539P-201ENST00000516665 RBM26Q5T8P6 1007 aaKnown RBP2□□□□□ -2.09
RNU6-539P-201ENST00000516665 HHIPL2Q6UWX4 724 aa2□□□□□ -2.09
RNU6-539P-201ENST00000516665 PPARGC1BQ86YN6 1023 aaKnown RBP2□□□□□ -2.09
RNU6-539P-201ENST00000516665 KRTAP4-3Q9BYR4 195 aa2□□□□□ -2.09
RNU6-539P-201ENST00000516665 KCNK12Q9HB15 430 aa2□□□□□ -2.09
RNU6-539P-201ENST00000516665 ZC3H7BQ9UGR2 993 aaKnown RBP2□□□□□ -2.09
RNU6-539P-201ENST00000516665 SMG5Q9UPR3 1016 aaKnown RBP2□□□□□ -2.09
RNU6-539P-201ENST00000516665 OTOL1A6NHN0 477 aaPredicted RBP1.99□□□□□ -2.09
RNU6-539P-201ENST00000516665 ZBTB42B2RXF5 422 aa1.99□□□□□ -2.09
RNU6-539P-201ENST00000516665 AMHP03971 560 aa1.99□□□□□ -2.09
RNU6-539P-201ENST00000516665 FUT4P22083 530 aa1.99□□□□□ -2.09
RNU6-539P-201ENST00000516665 ERICH6BQ5W0A0 696 aa1.99□□□□□ -2.09
RNU6-539P-201ENST00000516665 PPP2R2DQ66LE6 453 aa1.99□□□□□ -2.09
RNU6-539P-201ENST00000516665 BHMTQ93088 406 aa1.99□□□□□ -2.09
RNU6-539P-201ENST00000516665 XAGE2Q96GT9 111 aa1.99□□□□□ -2.09
RNU6-539P-201ENST00000516665 ZBTB3Q9H5J0 574 aa1.99□□□□□ -2.09
RNU6-539P-201ENST00000516665 FKBPLQ9UIM3 349 aa1.99□□□□□ -2.09
RNU6-539P-201ENST00000516665 EGFRP00533 1210 aa1.98□□□□□ -2.09
RNU6-539P-201ENST00000516665 GNRH1P01148 92 aa1.98□□□□□ -2.09
RNU6-539P-201ENST00000516665 MED14OSP0DP75 135 aa1.98□□□□□ -2.09
RNU6-539P-201ENST00000516665 BRPF1P55201 1214 aaPredicted RBP1.98□□□□□ -2.09
RNU6-539P-201ENST00000516665 PTK2Q05397 1052 aa1.98□□□□□ -2.09
RNU6-539P-201ENST00000516665 CSRP2Q16527 193 aa1.98□□□□□ -2.09
RNU6-539P-201ENST00000516665 PPP1R3FQ6ZSY5 799 aaPredicted RBP1.98□□□□□ -2.09
RNU6-539P-201ENST00000516665 FBXO15Q8NCQ5 510 aaPredicted RBP1.98□□□□□ -2.09
RNU6-539P-201ENST00000516665 LPIN3Q9BQK8 851 aa1.98□□□□□ -2.09
RNU6-539P-201ENST00000516665 DNAJB12Q9NXW2 375 aaKnown RBP1.98□□□□□ -2.09
RNU6-539P-201ENST00000516665 GIGYF1O75420 1035 aaPredicted RBP1.97□□□□□ -2.09
RNU6-539P-201ENST00000516665 BNIP3Q12983 259 aa1.97□□□□□ -2.09
RNU6-539P-201ENST00000516665 RTN1Q16799 776 aa1.97□□□□□ -2.09
RNU6-539P-201ENST00000516665 GDF6Q6KF10 455 aaPredicted RBP1.97□□□□□ -2.09
RNU6-539P-201ENST00000516665 FLAD1Q8NFF5 587 aa1.97□□□□□ -2.09
RNU6-539P-201ENST00000516665 ATP1B4Q9UN42 357 aaPredicted RBP1.97□□□□□ -2.09
RNU6-539P-201ENST00000516665 ETV2O00321 342 aaPredicted RBP1.96□□□□□ -2.1
RNU6-539P-201ENST00000516665 RSBN1LQ6PCB5 846 aaPredicted RBP1.96□□□□□ -2.1
RNU6-539P-201ENST00000516665 MPZL3Q6UWV2 235 aa1.96□□□□□ -2.1
RNU6-539P-201ENST00000516665 ACAD11Q709F0 780 aa1.96□□□□□ -2.1
RNU6-539P-201ENST00000516665 ZNF764Q96H86 408 aaPredicted RBP1.96□□□□□ -2.1
RNU6-539P-201ENST00000516665 DIRC2Q96SL1 478 aa1.96□□□□□ -2.1
RNU6-539P-201ENST00000516665 GPCPD1Q9NPB8 672 aa1.96□□□□□ -2.1
RNU6-539P-201ENST00000516665 STAU1O95793 577 aaKnown RBP1.95□□□□□ -2.1
RNU6-539P-201ENST00000516665 CD8BP10966 210 aa1.95□□□□□ -2.1
RNU6-539P-201ENST00000516665 C6P13671 934 aa1.95□□□□□ -2.1
RNU6-539P-201ENST00000516665 CPB1P15086 417 aa1.95□□□□□ -2.1
RNU6-539P-201ENST00000516665 TATP17735 454 aaPredicted RBP1.95□□□□□ -2.1
RNU6-539P-201ENST00000516665 GDF5P43026 501 aa1.95□□□□□ -2.1
RNU6-539P-201ENST00000516665 PREPP48147 710 aa1.95□□□□□ -2.1
RNU6-539P-201ENST00000516665 PLP2Q04941 152 aa1.95□□□□□ -2.1
RNU6-539P-201ENST00000516665 TLR1Q15399 786 aa1.95□□□□□ -2.1
RNU6-539P-201ENST00000516665 PERM1Q5SV97 790 aa1.95□□□□□ -2.1
RNU6-539P-201ENST00000516665 FAM35AQ86V20 835 aa1.95□□□□□ -2.1
RNU6-539P-201ENST00000516665 FOXD4L4Q8WXT5 416 aaPredicted RBP1.95□□□□□ -2.1
RNU6-539P-201ENST00000516665 METTL22Q9BUU2 404 aaPredicted RBP1.95□□□□□ -2.1
RNU6-539P-201ENST00000516665 LRRC4CQ9HCJ2 640 aa1.95□□□□□ -2.1
RNU6-539P-201ENST00000516665 ADMP35318 185 aa1.94□□□□□ -2.1
RNU6-539P-201ENST00000516665 CD96P40200 585 aa1.94□□□□□ -2.1
RNU6-539P-201ENST00000516665 SETDB1Q15047 1291 aa1.94□□□□□ -2.1
RNU6-539P-201ENST00000516665 NBPF1Q3BBV0 1214 aa1.94□□□□□ -2.1
RNU6-539P-201ENST00000516665 FYB2Q5VWT5 728 aa1.94□□□□□ -2.1
RNU6-539P-201ENST00000516665 LRRC69Q6ZNQ3 347 aa1.94□□□□□ -2.1
RNU6-539P-201ENST00000516665 GLCCI1Q86VQ1 547 aa1.94□□□□□ -2.1
RNU6-539P-201ENST00000516665 Q8N1X5 172 aa1.94□□□□□ -2.1
RNU6-539P-201ENST00000516665 PI4K2BQ8TCG2 481 aa1.94□□□□□ -2.1
RNU6-539P-201ENST00000516665 BDH2Q9BUT1 245 aa1.94□□□□□ -2.1
RNU6-539P-201ENST00000516665 NSUN3Q9H649 340 aaKnown RBP1.94□□□□□ -2.1
RNU6-539P-201ENST00000516665 DLL4Q9NR61 685 aa1.94□□□□□ -2.1
RNU6-539P-201ENST00000516665 CYR61O00622 381 aa1.93□□□□□ -2.1
RNU6-539P-201ENST00000516665 GLDCP23378 1020 aa1.93□□□□□ -2.1
RNU6-539P-201ENST00000516665 MAP4P27816 1152 aaKnown RBP1.93□□□□□ -2.1
RNU6-539P-201ENST00000516665 CSPP1Q1MSJ5 1256 aa1.93□□□□□ -2.1
RNU6-539P-201ENST00000516665 BICDL1Q6ZP65 573 aa1.93□□□□□ -2.1
RNU6-539P-201ENST00000516665 FEZF2Q8TBJ5 459 aa1.93□□□□□ -2.1
RNU6-539P-201ENST00000516665 ARHGEF1Q92888 912 aaKnown RBP1.93□□□□□ -2.1
RNU6-539P-201ENST00000516665 ADAM7Q9H2U9 754 aa1.93□□□□□ -2.1
RNU6-539P-201ENST00000516665 GPSM3Q9Y4H4 160 aa1.93□□□□□ -2.1
RNU6-539P-201ENST00000516665 FAM170BA6NMN3 283 aa1.92□□□□□ -2.1
RNU6-539P-201ENST00000516665 GJA5P36382 358 aa1.92□□□□□ -2.1
RNU6-539P-201ENST00000516665 SGO2Q562F6 1265 aa1.92□□□□□ -2.1
RNU6-539P-201ENST00000516665 KIAA1211Q6ZU35 1233 aa1.92□□□□□ -2.1
RNU6-539P-201ENST00000516665 ZDHHC14Q8IZN3 488 aa1.92□□□□□ -2.1
RNU6-539P-201ENST00000516665 STK11IPQ8N1F8 1099 aa1.92□□□□□ -2.1
RNU6-539P-201ENST00000516665 NIFKQ9BYG3 293 aaKnown RBP1.92□□□□□ -2.1
RNU6-539P-201ENST00000516665 KCNK4Q9NYG8 393 aa1.92□□□□□ -2.1
RNU6-539P-201ENST00000516665 FRRS1LQ9P0K9 344 aa1.92□□□□□ -2.1
RNU6-539P-201ENST00000516665 ZC3H4Q9UPT8 1303 aaKnown RBP1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms