RNA–Protein interactions for RNA: ENST00000515658.1

COL4A5-210, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-210ENST00000515658 NPR1P16066 1061 aa12.85□□□□□ -0.35
COL4A5-210ENST00000515658 CRY2Q49AN0 593 aa12.85□□□□□ -0.35
COL4A5-210ENST00000515658 FAM9BQ8IZU0 186 aa12.85□□□□□ -0.35
COL4A5-210ENST00000515658 TAF1P21675 1872 aa12.85□□□□□ -0.35
COL4A5-210ENST00000515658 GTF2E1P29083 439 aaPredicted RBP12.84□□□□□ -0.35
COL4A5-210ENST00000515658 GNAI1P63096 354 aa12.84□□□□□ -0.35
COL4A5-210ENST00000515658 GOLGA2Q08379 1002 aa12.84□□□□□ -0.35
COL4A5-210ENST00000515658 G2E3Q7L622 706 aa12.84□□□□□ -0.35
COL4A5-210ENST00000515658 JARID2Q92833 1246 aaPredicted RBP12.84□□□□□ -0.35
COL4A5-210ENST00000515658 IBTKQ9P2D0 1353 aaPredicted RBP12.83□□□□□ -0.36
COL4A5-210ENST00000515658 DDX60Q8IY21 1712 aaKnown RBP12.83□□□□□ -0.36
COL4A5-210ENST00000515658 POTEMA6NI47 508 aa12.83□□□□□ -0.36
COL4A5-210ENST00000515658 LMNB1P20700 586 aa12.83□□□□□ -0.36
COL4A5-210ENST00000515658 TCIRG1Q13488 830 aa12.83□□□□□ -0.36
COL4A5-210ENST00000515658 RTL5Q5HYW3 569 aaPredicted RBP12.83□□□□□ -0.36
COL4A5-210ENST00000515658 IER5LQ5T953 404 aa12.83□□□□□ -0.36
COL4A5-210ENST00000515658 CNKSR1Q969H4 720 aa12.83□□□□□ -0.36
COL4A5-210ENST00000515658 STK24Q9Y6E0 443 aa12.83□□□□□ -0.36
COL4A5-210ENST00000515658 POTECB2RU33 542 aa12.82□□□□□ -0.36
COL4A5-210ENST00000515658 HOXB7P09629 217 aa12.82□□□□□ -0.36
COL4A5-210ENST00000515658 CCDC27Q2M243 656 aa12.82□□□□□ -0.36
COL4A5-210ENST00000515658 PLBD2Q8NHP8 589 aa12.82□□□□□ -0.36
COL4A5-210ENST00000515658 OTUD5Q96G74 571 aa12.82□□□□□ -0.36
COL4A5-210ENST00000515658 ISCA1Q9BUE6 129 aa12.82□□□□□ -0.36
COL4A5-210ENST00000515658 UTP14AQ9BVJ6 771 aaKnown RBP12.82□□□□□ -0.36
COL4A5-210ENST00000515658 RRAGCQ9HB90 399 aa12.82□□□□□ -0.36
COL4A5-210ENST00000515658 ZNF277Q9NRM2 450 aaPredicted RBP12.82□□□□□ -0.36
COL4A5-210ENST00000515658 DBF4Q9UBU7 674 aaPredicted RBP12.82□□□□□ -0.36
COL4A5-210ENST00000515658 CEP350Q5VT06 3117 aa12.82□□□□□ -0.36
COL4A5-210ENST00000515658 FANCIQ9NVI1 1328 aa12.82□□□□□ -0.36
COL4A5-210ENST00000515658 RIC1Q4ADV7 1423 aa12.81□□□□□ -0.36
COL4A5-210ENST00000515658 ANKRD13DQ6ZTN6 518 aa12.81□□□□□ -0.36
COL4A5-210ENST00000515658 SLC39A7Q92504 469 aa12.81□□□□□ -0.36
COL4A5-210ENST00000515658 FAM89AQ96GI7 184 aa12.81□□□□□ -0.36
COL4A5-210ENST00000515658 NYXQ9GZU5 481 aa12.81□□□□□ -0.36
COL4A5-210ENST00000515658 TAOK3Q9H2K8 898 aa12.81□□□□□ -0.36
COL4A5-210ENST00000515658 C7P10643 843 aa12.8□□□□□ -0.36
COL4A5-210ENST00000515658 HOXA10P31260 410 aaPredicted RBP12.8□□□□□ -0.36
COL4A5-210ENST00000515658 PARP10Q53GL7 1025 aa12.8□□□□□ -0.36
COL4A5-210ENST00000515658 SLC10A5Q5PT55 438 aa12.8□□□□□ -0.36
COL4A5-210ENST00000515658 TRMT112Q9UI30 125 aaKnown RBP12.8□□□□□ -0.36
COL4A5-210ENST00000515658 PDZRN3Q9UPQ7 1066 aa12.8□□□□□ -0.36
COL4A5-210ENST00000515658 ABCC4O15439 1325 aa12.8□□□□□ -0.36
COL4A5-210ENST00000515658 ZNF541Q9H0D2 1346 aa12.8□□□□□ -0.36
COL4A5-210ENST00000515658 MKRN3Q13064 507 aaKnown RBP12.79□□□□□ -0.36
COL4A5-210ENST00000515658 CCDC93Q567U6 631 aa12.79□□□□□ -0.36
COL4A5-210ENST00000515658 PPP1R42Q7Z4L9 355 aa12.79□□□□□ -0.36
COL4A5-210ENST00000515658 MYD88Q99836 296 aa12.79□□□□□ -0.36
COL4A5-210ENST00000515658 HYPKQ9NX55 129 aa12.79□□□□□ -0.36
COL4A5-210ENST00000515658 DICER1Q9UPY3 1922 aaKnown RBP12.79□□□□□ -0.36
COL4A5-210ENST00000515658 LTBP3Q9NS15 1303 aa12.79□□□□□ -0.36
COL4A5-210ENST00000515658 DDNO94850 711 aaPredicted RBP12.78□□□□□ -0.36
COL4A5-210ENST00000515658 POTEJP0CG39 1038 aa12.78□□□□□ -0.36
COL4A5-210ENST00000515658 HTRA3P83110 453 aa12.78□□□□□ -0.36
COL4A5-210ENST00000515658 CALD1Q05682 793 aaKnown RBP12.78□□□□□ -0.36
COL4A5-210ENST00000515658 EXOSC9Q06265 439 aaKnown RBP12.78□□□□□ -0.36
COL4A5-210ENST00000515658 TWISTNBQ3B726 338 aaPredicted RBP12.78□□□□□ -0.36
COL4A5-210ENST00000515658 RPGRQ92834 1020 aaKnown RBP12.78□□□□□ -0.36
COL4A5-210ENST00000515658 GLTPD2A6NH11 291 aa12.77□□□□□ -0.37
COL4A5-210ENST00000515658 PPEF1O14829 653 aaPredicted RBP12.77□□□□□ -0.37
COL4A5-210ENST00000515658 FKBP4Q02790 459 aaKnown RBP eCLIP12.77□□□□□ -0.37
COL4A5-210ENST00000515658 RIC3Q7Z5B4 369 aa12.77□□□□□ -0.37
COL4A5-210ENST00000515658 SH3TC1Q8TE82 1336 aa12.77□□□□□ -0.37
COL4A5-210ENST00000515658 VAMP4O75379 141 aa12.76□□□□□ -0.37
COL4A5-210ENST00000515658 IGKV5-2P06315 115 aa12.76□□□□□ -0.37
COL4A5-210ENST00000515658 HSP90AB3PQ58FF7 597 aa12.76□□□□□ -0.37
COL4A5-210ENST00000515658 POTEGQ6S5H5 508 aa12.76□□□□□ -0.37
COL4A5-210ENST00000515658 NLRP3Q96P20 1036 aa12.76□□□□□ -0.37
COL4A5-210ENST00000515658 CRAMP1Q96RY5 1269 aa12.76□□□□□ -0.37
COL4A5-210ENST00000515658 MAP3K2Q9Y2U5 619 aa12.76□□□□□ -0.37
COL4A5-210ENST00000515658 IL16Q14005 1332 aa12.76□□□□□ -0.37
COL4A5-210ENST00000515658 ZNF521Q96K83 1311 aa12.76□□□□□ -0.37
COL4A5-210ENST00000515658 DUOX1Q9NRD9 1551 aa12.76□□□□□ -0.37
COL4A5-210ENST00000515658 PI4KAP2A4QPH2 592 aa12.75□□□□□ -0.37
COL4A5-210ENST00000515658 ALDH1B1P30837 517 aa12.75□□□□□ -0.37
COL4A5-210ENST00000515658 CWF19L2Q2TBE0 894 aaKnown RBP12.75□□□□□ -0.37
COL4A5-210ENST00000515658 CCDC30Q5VVM6 783 aa12.75□□□□□ -0.37
COL4A5-210ENST00000515658 PI4KAP1Q8N8J0 262 aa12.75□□□□□ -0.37
COL4A5-210ENST00000515658 CELF1Q92879 486 aaKnown RBP12.75□□□□□ -0.37
COL4A5-210ENST00000515658 RBM17Q96I25 401 aaKnown RBP12.75□□□□□ -0.37
COL4A5-210ENST00000515658 WDR90Q96KV7 1748 aa12.75□□□□□ -0.37
COL4A5-210ENST00000515658 CCDC85AQ96PX6 553 aaPredicted RBP12.75□□□□□ -0.37
COL4A5-210ENST00000515658 LTBP1Q14766 1721 aa12.74□□□□□ -0.37
COL4A5-210ENST00000515658 KDM2BQ8NHM5 1336 aa12.74□□□□□ -0.37
COL4A5-210ENST00000515658 TOMM70O94826 608 aa12.74□□□□□ -0.37
COL4A5-210ENST00000515658 IARSP41252 1262 aaKnown RBP12.74□□□□□ -0.37
COL4A5-210ENST00000515658 WDR63Q8IWG1 891 aa12.74□□□□□ -0.37
COL4A5-210ENST00000515658 EFCAB3Q8N7B9 438 aa12.74□□□□□ -0.37
COL4A5-210ENST00000515658 GPR101Q96P66 508 aaPredicted RBP12.74□□□□□ -0.37
COL4A5-210ENST00000515658 METTL22Q9BUU2 404 aaPredicted RBP12.74□□□□□ -0.37
COL4A5-210ENST00000515658 SEC31BQ9NQW1 1179 aa12.74□□□□□ -0.37
COL4A5-210ENST00000515658 WTIPA6NIX2 430 aaPredicted RBP12.73□□□□□ -0.37
COL4A5-210ENST00000515658 IRS4O14654 1257 aaPredicted RBP12.73□□□□□ -0.37
COL4A5-210ENST00000515658 HSPA6P17066 643 aa12.73□□□□□ -0.37
COL4A5-210ENST00000515658 TRIM28Q13263 835 aaKnown RBP12.73□□□□□ -0.37
COL4A5-210ENST00000515658 CDCA7LQ96GN5 454 aa12.73□□□□□ -0.37
COL4A5-210ENST00000515658 METRNQ9UJH8 293 aa12.73□□□□□ -0.37
COL4A5-210ENST00000515658 ATP6V0A2Q9Y487 856 aa12.73□□□□□ -0.37
COL4A5-210ENST00000515658 ZC3H4Q9UPT8 1303 aaKnown RBP12.72□□□□□ -0.37
COL4A5-210ENST00000515658 LRRC37AA6NMS7 1700 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms