RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	DPP8	Q6V1X1	898 aa	Predicted RBP	14.01	□□□□□ -0.17
CLDND1-231	ENST00000515620	RTFDC1	Q9BY42	306 aa	Predicted RBP	14.01	□□□□□ -0.17
CLDND1-231	ENST00000515620	CNOT7	Q9UIV1	285 aa	Known RBP	14.01	□□□□□ -0.17
CLDND1-231	ENST00000515620	RRP7A	Q9Y3A4	280 aa	Known RBP	14.01	□□□□□ -0.17
CLDND1-231	ENST00000515620	ABCC4	O15439	1325 aa		14	□□□□□ -0.17
CLDND1-231	ENST00000515620	MYL6B	P14649	208 aa		14	□□□□□ -0.17
CLDND1-231	ENST00000515620	KIF23	Q02241	960 aa	Predicted RBP	14	□□□□□ -0.17
CLDND1-231	ENST00000515620	KIAA2012	Q0VF49	1180 aa		14	□□□□□ -0.17
CLDND1-231	ENST00000515620	MICALL2	Q8IY33	904 aa		14	□□□□□ -0.17
CLDND1-231	ENST00000515620	GBA2	Q9HCG7	927 aa	Predicted RBP	14	□□□□□ -0.17
CLDND1-231	ENST00000515620	MIS18A	Q9NYP9	233 aa		14	□□□□□ -0.17
CLDND1-231	ENST00000515620		H7C1D1	291 aa		13.99	□□□□□ -0.17
CLDND1-231	ENST00000515620	KRT26	Q7Z3Y9	468 aa		13.99	□□□□□ -0.17
CLDND1-231	ENST00000515620	ZNF34	Q8IZ26	560 aa		13.99	□□□□□ -0.17
CLDND1-231	ENST00000515620	NLRP3	Q96P20	1036 aa		13.99	□□□□□ -0.17
CLDND1-231	ENST00000515620	RNF186	Q9NXI6	227 aa		13.99	□□□□□ -0.17
CLDND1-231	ENST00000515620	CLSPN	Q9HAW4	1339 aa		13.98	□□□□□ -0.17
CLDND1-231	ENST00000515620	YDJC	A8MPS7	323 aa		13.98	□□□□□ -0.17
CLDND1-231	ENST00000515620	ADM5	C9JUS6	153 aa		13.98	□□□□□ -0.17
CLDND1-231	ENST00000515620	ZNF157	P51786	506 aa	Predicted RBP	13.98	□□□□□ -0.17
CLDND1-231	ENST00000515620	TAF7	Q15545	349 aa	Predicted RBP	13.98	□□□□□ -0.17
CLDND1-231	ENST00000515620	SAMD7	Q7Z3H4	446 aa		13.98	□□□□□ -0.17
CLDND1-231	ENST00000515620	PPP1R42	Q7Z4L9	355 aa		13.98	□□□□□ -0.17
CLDND1-231	ENST00000515620	CTU1	Q7Z7A3	348 aa	Known RBP	13.98	□□□□□ -0.17
CLDND1-231	ENST00000515620	MPND	Q8N594	471 aa		13.98	□□□□□ -0.17
CLDND1-231	ENST00000515620	C2orf69	Q8N8R5	385 aa		13.98	□□□□□ -0.17
CLDND1-231	ENST00000515620	CCDC102A	Q96A19	550 aa		13.98	□□□□□ -0.17
CLDND1-231	ENST00000515620	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.97	□□□□□ -0.17
CLDND1-231	ENST00000515620	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
CLDND1-231	ENST00000515620	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.97	□□□□□ -0.17
CLDND1-231	ENST00000515620	CFAP53	Q96M91	514 aa		13.97	□□□□□ -0.17
CLDND1-231	ENST00000515620	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.97	□□□□□ -0.17
CLDND1-231	ENST00000515620	DUOX1	Q9NRD9	1551 aa		13.96	□□□□□ -0.17
CLDND1-231	ENST00000515620	KDM3B	Q7LBC6	1761 aa		13.96	□□□□□ -0.17
CLDND1-231	ENST00000515620	PARP10	Q53GL7	1025 aa		13.96	□□□□□ -0.17
CLDND1-231	ENST00000515620	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.96	□□□□□ -0.17
CLDND1-231	ENST00000515620	SP8	Q8IXZ3	490 aa		13.96	□□□□□ -0.17
CLDND1-231	ENST00000515620	HPS5	Q9UPZ3	1129 aa		13.96	□□□□□ -0.17
CLDND1-231	ENST00000515620	HTATSF1	O43719	755 aa	Known RBP	13.95	□□□□□ -0.18
CLDND1-231	ENST00000515620	BBOX1	O75936	387 aa		13.95	□□□□□ -0.18
CLDND1-231	ENST00000515620	EGFR	P00533	1210 aa		13.95	□□□□□ -0.18
CLDND1-231	ENST00000515620	SLC10A3	P09131	477 aa		13.95	□□□□□ -0.18
CLDND1-231	ENST00000515620	UTP14A	Q9BVJ6	771 aa	Known RBP	13.95	□□□□□ -0.18
CLDND1-231	ENST00000515620	NUDC	Q9Y266	331 aa		13.95	□□□□□ -0.18
CLDND1-231	ENST00000515620	PSMD14	O00487	310 aa		13.94	□□□□□ -0.18
CLDND1-231	ENST00000515620	RBM26	Q5T8P6	1007 aa	Known RBP	13.94	□□□□□ -0.18
CLDND1-231	ENST00000515620	DPF2	Q92785	391 aa		13.94	□□□□□ -0.18
CLDND1-231	ENST00000515620	DCPS	Q96C86	337 aa	Known RBP	13.94	□□□□□ -0.18
CLDND1-231	ENST00000515620	CSRNP1	Q96S65	589 aa		13.94	□□□□□ -0.18
CLDND1-231	ENST00000515620	PCGF6	Q9BYE7	350 aa		13.94	□□□□□ -0.18
CLDND1-231	ENST00000515620	AKAP11	Q9UKA4	1901 aa		13.94	□□□□□ -0.18
CLDND1-231	ENST00000515620	LAMB2	P55268	1798 aa		13.94	□□□□□ -0.18
CLDND1-231	ENST00000515620	HCLS1	P14317	486 aa	Predicted RBP	13.93	□□□□□ -0.18
CLDND1-231	ENST00000515620	EIF4A1	P60842	406 aa	Known RBP	13.93	□□□□□ -0.18
CLDND1-231	ENST00000515620	TRIM26	Q12899	539 aa	Predicted RBP	13.93	□□□□□ -0.18
CLDND1-231	ENST00000515620	SLC10A5	Q5PT55	438 aa		13.93	□□□□□ -0.18
CLDND1-231	ENST00000515620	DDX46	Q7L014	1031 aa	Known RBP	13.93	□□□□□ -0.18
CLDND1-231	ENST00000515620	DBNDD1	Q9H9R9	158 aa		13.93	□□□□□ -0.18
CLDND1-231	ENST00000515620	GRAP	Q13588	217 aa		13.92	□□□□□ -0.18
CLDND1-231	ENST00000515620	RASAL3	Q86YV0	1011 aa		13.92	□□□□□ -0.18
CLDND1-231	ENST00000515620	GRAPL	Q8TC17	118 aa	Predicted RBP	13.92	□□□□□ -0.18
CLDND1-231	ENST00000515620	PNISR	Q8TF01	805 aa	Known RBP	13.92	□□□□□ -0.18
CLDND1-231	ENST00000515620	GGA3	Q9NZ52	723 aa		13.92	□□□□□ -0.18
CLDND1-231	ENST00000515620	LRRC37A	A6NMS7	1700 aa		13.91	□□□□□ -0.18
CLDND1-231	ENST00000515620	KIF4B	Q2VIQ3	1234 aa		13.91	□□□□□ -0.18
CLDND1-231	ENST00000515620	SULF1	Q8IWU6	871 aa		13.91	□□□□□ -0.18
CLDND1-231	ENST00000515620	THUMPD2	Q9BTF0	503 aa	Known RBP	13.91	□□□□□ -0.18
CLDND1-231	ENST00000515620	HDAC9	Q9UKV0	1011 aa		13.91	□□□□□ -0.18
CLDND1-231	ENST00000515620	ANKRD36C	Q5JPF3	1778 aa		13.91	□□□□□ -0.18
CLDND1-231	ENST00000515620	ERBB4	Q15303	1308 aa		13.9	□□□□□ -0.18
CLDND1-231	ENST00000515620	RIMBP2	O15034	1052 aa		13.9	□□□□□ -0.18
CLDND1-231	ENST00000515620	RPS12	P25398	132 aa	Known RBP	13.9	□□□□□ -0.18
CLDND1-231	ENST00000515620	WASHC4	Q2M389	1173 aa		13.9	□□□□□ -0.18
CLDND1-231	ENST00000515620	GCC1	Q96CN9	775 aa		13.9	□□□□□ -0.18
CLDND1-231	ENST00000515620	CDCA5	Q96FF9	252 aa		13.9	□□□□□ -0.18
CLDND1-231	ENST00000515620	ASTN2	O75129	1339 aa	Predicted RBP	13.9	□□□□□ -0.19
CLDND1-231	ENST00000515620	RTL9	Q8NET4	1388 aa		13.89	□□□□□ -0.19
CLDND1-231	ENST00000515620	ECE2	O60344	883 aa		13.89	□□□□□ -0.19
CLDND1-231	ENST00000515620	PKN2	Q16513	984 aa	Known RBP	13.89	□□□□□ -0.19
CLDND1-231	ENST00000515620	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.89	□□□□□ -0.19
CLDND1-231	ENST00000515620	KCNQ5	Q9NR82	932 aa		13.89	□□□□□ -0.19
CLDND1-231	ENST00000515620	DDX60	Q8IY21	1712 aa	Known RBP	13.88	□□□□□ -0.19
CLDND1-231	ENST00000515620	TBC1D8	O95759	1140 aa		13.88	□□□□□ -0.19
CLDND1-231	ENST00000515620	DOK7	Q18PE1	504 aa		13.88	□□□□□ -0.19
CLDND1-231	ENST00000515620	TMC4	Q7Z404	712 aa		13.88	□□□□□ -0.19
CLDND1-231	ENST00000515620	LRP10	Q7Z4F1	713 aa		13.88	□□□□□ -0.19
CLDND1-231	ENST00000515620	NLRP10	Q86W26	655 aa		13.88	□□□□□ -0.19
CLDND1-231	ENST00000515620	REM2	Q8IYK8	340 aa	Predicted RBP	13.88	□□□□□ -0.19
CLDND1-231	ENST00000515620	TRMT112	Q9UI30	125 aa	Known RBP	13.88	□□□□□ -0.19
CLDND1-231	ENST00000515620	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.88	□□□□□ -0.19
CLDND1-231	ENST00000515620	TAF1	P21675	1872 aa		13.88	□□□□□ -0.19
CLDND1-231	ENST00000515620	POLR2A	P24928	1970 aa	Known RBP	13.87	□□□□□ -0.19
CLDND1-231	ENST00000515620	PAPPA2	Q9BXP8	1791 aa		13.87	□□□□□ -0.19
CLDND1-231	ENST00000515620	C6orf229	H3BNL8	230 aa		13.87	□□□□□ -0.19
CLDND1-231	ENST00000515620	ANXA1	P04083	346 aa		13.87	□□□□□ -0.19
CLDND1-231	ENST00000515620	PROSER3	Q2NL68	480 aa		13.87	□□□□□ -0.19
CLDND1-231	ENST00000515620	ZNF428	Q96B54	188 aa		13.87	□□□□□ -0.19
CLDND1-231	ENST00000515620	SH3TC1	Q8TE82	1336 aa		13.87	□□□□□ -0.19
CLDND1-231	ENST00000515620	DLG5	Q8TDM6	1919 aa		13.86	□□□□□ -0.19
CLDND1-231	ENST00000515620	EIF2S2	P20042	333 aa	Known RBP	13.86	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms