RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 NTSR2O95665 410 aa11.23□□□□□ -0.61
CPNE4-213ENST00000515418 ITGA6P23229 1130 aa11.23□□□□□ -0.61
CPNE4-213ENST00000515418 ANP32AP39687 249 aaKnown RBP11.23□□□□□ -0.61
CPNE4-213ENST00000515418 CTSWP56202 376 aa11.23□□□□□ -0.61
CPNE4-213ENST00000515418 IFIT5Q13325 482 aaKnown RBP11.23□□□□□ -0.61
CPNE4-213ENST00000515418 TXNRD1Q16881 649 aa11.23□□□□□ -0.61
CPNE4-213ENST00000515418 SH3TC1Q8TE82 1336 aa11.23□□□□□ -0.61
CPNE4-213ENST00000515418 EYA2O00167 538 aa11.22□□□□□ -0.61
CPNE4-213ENST00000515418 RFC4P35249 363 aa11.22□□□□□ -0.61
CPNE4-213ENST00000515418 TIMM10P62072 90 aa11.22□□□□□ -0.61
CPNE4-213ENST00000515418 PARP10Q53GL7 1025 aa11.22□□□□□ -0.61
CPNE4-213ENST00000515418 CCDC24Q8N4L8 307 aa11.22□□□□□ -0.61
CPNE4-213ENST00000515418 C4BP0C0L5 1744 aa11.22□□□□□ -0.61
CPNE4-213ENST00000515418 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.21□□□□□ -0.61
CPNE4-213ENST00000515418 ERFEQ4G0M1 354 aa11.21□□□□□ -0.61
CPNE4-213ENST00000515418 TNNI3KQ59H18 835 aa11.21□□□□□ -0.61
CPNE4-213ENST00000515418 TAF7LQ5H9L4 462 aa11.21□□□□□ -0.61
CPNE4-213ENST00000515418 FPGT-TNNI3KV9GXZ4 949 aa11.21□□□□□ -0.61
CPNE4-213ENST00000515418 MYH3P11055 1940 aa11.21□□□□□ -0.61
CPNE4-213ENST00000515418 SLC27A3Q5K4L6 730 aa11.21□□□□□ -0.62
CPNE4-213ENST00000515418 NEUROD6Q96NK8 337 aa11.21□□□□□ -0.62
CPNE4-213ENST00000515418 SEC31BQ9NQW1 1179 aa11.21□□□□□ -0.62
CPNE4-213ENST00000515418 ECHDC1Q9NTX5 307 aa11.21□□□□□ -0.62
CPNE4-213ENST00000515418 DBNLQ9UJU6 430 aaKnown RBP11.21□□□□□ -0.62
CPNE4-213ENST00000515418 IL15P40933 162 aaPredicted RBP11.2□□□□□ -0.62
CPNE4-213ENST00000515418 C3orf67Q6ZVT6 689 aa11.2□□□□□ -0.62
CPNE4-213ENST00000515418 SETDB2Q96T68 719 aa11.2□□□□□ -0.62
CPNE4-213ENST00000515418 DBNDD2Q9BQY9 259 aa11.2□□□□□ -0.62
CPNE4-213ENST00000515418 UPF2Q9HAU5 1272 aaKnown RBP11.2□□□□□ -0.62
CPNE4-213ENST00000515418 BCORQ6W2J9 1755 aa11.2□□□□□ -0.62
CPNE4-213ENST00000515418 ANKRD18BA2A2Z9 1011 aa11.19□□□□□ -0.62
CPNE4-213ENST00000515418 GTF2E1P29083 439 aaPredicted RBP11.19□□□□□ -0.62
CPNE4-213ENST00000515418 AOX1Q06278 1338 aa11.19□□□□□ -0.62
CPNE4-213ENST00000515418 TTC41PQ6P2S7 1318 aa11.19□□□□□ -0.62
CPNE4-213ENST00000515418 LDHAL6AQ6ZMR3 332 aa11.19□□□□□ -0.62
CPNE4-213ENST00000515418 TBC1D32Q96NH3 1257 aa11.19□□□□□ -0.62
CPNE4-213ENST00000515418 TUBGCP6Q96RT7 1819 aa11.19□□□□□ -0.62
CPNE4-213ENST00000515418 C22orf23Q9BZE7 217 aa11.19□□□□□ -0.62
CPNE4-213ENST00000515418 BOLA2Q9H3K6 86 aa11.19□□□□□ -0.62
CPNE4-213ENST00000515418 USP42Q9H9J4 1324 aaKnown RBP11.19□□□□□ -0.62
CPNE4-213ENST00000515418 GLRX3O76003 335 aaKnown RBP11.19□□□□□ -0.62
CPNE4-213ENST00000515418 CIAO1O76071 339 aa11.19□□□□□ -0.62
CPNE4-213ENST00000515418 IPO9Q96P70 1041 aaKnown RBP11.19□□□□□ -0.62
CPNE4-213ENST00000515418 CEP126Q9P2H0 1117 aa11.19□□□□□ -0.62
CPNE4-213ENST00000515418 RIPOR2Q9Y4F9 1068 aa11.19□□□□□ -0.62
CPNE4-213ENST00000515418 NDUFB9Q9Y6M9 179 aa11.19□□□□□ -0.62
CPNE4-213ENST00000515418 ERC2O15083 957 aa11.18□□□□□ -0.62
CPNE4-213ENST00000515418 PLSCR1O15162 318 aa11.18□□□□□ -0.62
CPNE4-213ENST00000515418 POTEHQ6S545 545 aa11.18□□□□□ -0.62
CPNE4-213ENST00000515418 NBPF5PQ86XG9 351 aaPredicted RBP11.18□□□□□ -0.62
CPNE4-213ENST00000515418 GPATCH3Q96I76 525 aa11.18□□□□□ -0.62
CPNE4-213ENST00000515418 CNNM1Q9NRU3 951 aa11.18□□□□□ -0.62
CPNE4-213ENST00000515418 TAF1P21675 1872 aa11.18□□□□□ -0.62
CPNE4-213ENST00000515418 DDX60Q8IY21 1712 aaKnown RBP11.18□□□□□ -0.62
CPNE4-213ENST00000515418 CHMLP26374 656 aa11.17□□□□□ -0.62
CPNE4-213ENST00000515418 SLC4A3P48751 1232 aa11.17□□□□□ -0.62
CPNE4-213ENST00000515418 HELBQ8NG08 1087 aaPredicted RBP11.17□□□□□ -0.62
CPNE4-213ENST00000515418 EDC3Q96F86 508 aaKnown RBP11.17□□□□□ -0.62
CPNE4-213ENST00000515418 AK9Q5TCS8 1911 aa11.17□□□□□ -0.62
CPNE4-213ENST00000515418 UBR3Q6ZT12 1888 aa11.17□□□□□ -0.62
CPNE4-213ENST00000515418 A0A1B0GUL7 405 aa11.17□□□□□ -0.62
CPNE4-213ENST00000515418 NFIXQ14938 502 aa11.17□□□□□ -0.62
CPNE4-213ENST00000515418 ZNF827Q17R98 1081 aa11.17□□□□□ -0.62
CPNE4-213ENST00000515418 TFCP2L1Q9NZI6 479 aa11.17□□□□□ -0.62
CPNE4-213ENST00000515418 C4AP0C0L4 1744 aa11.17□□□□□ -0.62
CPNE4-213ENST00000515418 GYS1P13807 737 aa11.16□□□□□ -0.62
CPNE4-213ENST00000515418 CCDC152Q4G0S7 254 aa11.16□□□□□ -0.62
CPNE4-213ENST00000515418 METTL24Q5JXM2 366 aa11.16□□□□□ -0.62
CPNE4-213ENST00000515418 CASC1Q6TDU7 716 aa11.16□□□□□ -0.62
CPNE4-213ENST00000515418 TPTE2Q6XPS3 522 aa11.16□□□□□ -0.62
CPNE4-213ENST00000515418 IL25Q9H293 177 aa11.16□□□□□ -0.62
CPNE4-213ENST00000515418 SCN7AQ01118 1682 aa11.16□□□□□ -0.62
CPNE4-213ENST00000515418 SNAP23O00161 211 aa11.16□□□□□ -0.62
CPNE4-213ENST00000515418 ADRA2BP18089 450 aa11.16□□□□□ -0.62
CPNE4-213ENST00000515418 ADORA1P30542 326 aa11.16□□□□□ -0.62
CPNE4-213ENST00000515418 CNTROBQ8N137 903 aa11.16□□□□□ -0.62
CPNE4-213ENST00000515418 GPR108Q9NPR9 543 aa11.16□□□□□ -0.62
CPNE4-213ENST00000515418 ABCC12Q96J65 1359 aa11.15□□□□□ -0.62
CPNE4-213ENST00000515418 RGL2O15211 777 aa11.15□□□□□ -0.62
CPNE4-213ENST00000515418 NPHP1O15259 732 aa11.15□□□□□ -0.62
CPNE4-213ENST00000515418 TAF5LO75529 589 aa11.15□□□□□ -0.62
CPNE4-213ENST00000515418 ATP5JP18859 108 aa11.15□□□□□ -0.62
CPNE4-213ENST00000515418 SSFA2P28290 1259 aa11.15□□□□□ -0.62
CPNE4-213ENST00000515418 SLC10A5Q5PT55 438 aa11.15□□□□□ -0.62
CPNE4-213ENST00000515418 ESYT1Q9BSJ8 1104 aa11.15□□□□□ -0.62
CPNE4-213ENST00000515418 USP26Q9BXU7 913 aa11.15□□□□□ -0.62
CPNE4-213ENST00000515418 NYXQ9GZU5 481 aa11.15□□□□□ -0.62
CPNE4-213ENST00000515418 FBXO3Q9UK99 471 aa11.15□□□□□ -0.62
CPNE4-213ENST00000515418 COL4A1P02462 1669 aa11.15□□□□□ -0.63
CPNE4-213ENST00000515418 HSP90B1P14625 803 aaKnown RBP11.14□□□□□ -0.63
CPNE4-213ENST00000515418 EN1Q05925 392 aaPredicted RBP11.14□□□□□ -0.63
CPNE4-213ENST00000515418 CWC27Q6UX04 472 aaKnown RBP11.14□□□□□ -0.63
CPNE4-213ENST00000515418 AKT1S1Q96B36 256 aa11.14□□□□□ -0.63
CPNE4-213ENST00000515418 XAGE2Q96GT9 111 aa11.14□□□□□ -0.63
CPNE4-213ENST00000515418 DNAJC2Q99543 621 aaKnown RBP11.14□□□□□ -0.63
CPNE4-213ENST00000515418 MPHOSPH8Q99549 860 aa11.14□□□□□ -0.63
CPNE4-213ENST00000515418 WTIPA6NIX2 430 aaPredicted RBP11.14□□□□□ -0.63
CPNE4-213ENST00000515418 SF3B3Q15393 1217 aaKnown RBP11.14□□□□□ -0.63
CPNE4-213ENST00000515418 COL23A1Q86Y22 540 aaPredicted RBP11.14□□□□□ -0.63
CPNE4-213ENST00000515418 VGLL2Q8N8G2 317 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms