RNA–Protein interactions for RNA: ENST00000515170.5

RAPGEF6-214, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 2

Gene RAPGEF6, Length 4,103 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-214ENST00000515170 EYA2O00167 538 aa11.69□□□□□ -0.54
RAPGEF6-214ENST00000515170 MSL1Q68DK7 614 aa11.69□□□□□ -0.54
RAPGEF6-214ENST00000515170 TRIM22Q8IYM9 498 aa11.69□□□□□ -0.54
RAPGEF6-214ENST00000515170 FAM227BQ96M60 508 aa11.69□□□□□ -0.54
RAPGEF6-214ENST00000515170 CDCA7Q9BWT1 371 aaPredicted RBP11.69□□□□□ -0.54
RAPGEF6-214ENST00000515170 ST5P78524 1137 aa11.69□□□□□ -0.54
RAPGEF6-214ENST00000515170 IFIT3O14879 490 aaKnown RBP11.69□□□□□ -0.54
RAPGEF6-214ENST00000515170 SMIM5Q71RC9 77 aa11.69□□□□□ -0.54
RAPGEF6-214ENST00000515170 CWC22Q9HCG8 908 aaKnown RBP11.69□□□□□ -0.54
RAPGEF6-214ENST00000515170 TFIP11Q9UBB9 837 aaKnown RBP11.69□□□□□ -0.54
RAPGEF6-214ENST00000515170 LIMCH1Q9UPQ0 1083 aa11.69□□□□□ -0.54
RAPGEF6-214ENST00000515170 CPS1P31327 1500 aa11.69□□□□□ -0.54
RAPGEF6-214ENST00000515170 APBA3O96018 575 aa11.68□□□□□ -0.54
RAPGEF6-214ENST00000515170 XBP1P17861 261 aa11.68□□□□□ -0.54
RAPGEF6-214ENST00000515170 AGLP35573 1532 aa11.68□□□□□ -0.54
RAPGEF6-214ENST00000515170 TRIM37O94972 964 aa11.68□□□□□ -0.54
RAPGEF6-214ENST00000515170 TPM4P67936 248 aa11.68□□□□□ -0.54
RAPGEF6-214ENST00000515170 TNNI3KQ59H18 835 aa11.68□□□□□ -0.54
RAPGEF6-214ENST00000515170 SASS6Q6UVJ0 657 aa11.68□□□□□ -0.54
RAPGEF6-214ENST00000515170 FPGT-TNNI3KV9GXZ4 949 aa11.68□□□□□ -0.54
RAPGEF6-214ENST00000515170 GOLGA8BA8MQT2 603 aa11.68□□□□□ -0.54
RAPGEF6-214ENST00000515170 TCIRG1Q13488 830 aa11.68□□□□□ -0.54
RAPGEF6-214ENST00000515170 VSIG10Q8N0Z9 540 aa11.67□□□□□ -0.54
RAPGEF6-214ENST00000515170 TMX3Q96JJ7 454 aa11.67□□□□□ -0.54
RAPGEF6-214ENST00000515170 NEK1Q96PY6 1258 aa11.67□□□□□ -0.54
RAPGEF6-214ENST00000515170 ANKARQ7Z5J8 1434 aa11.67□□□□□ -0.54
RAPGEF6-214ENST00000515170 LRRC24Q50LG9 513 aa11.67□□□□□ -0.54
RAPGEF6-214ENST00000515170 CNBD1Q8NA66 436 aa11.67□□□□□ -0.54
RAPGEF6-214ENST00000515170 EAF2Q96CJ1 260 aaPredicted RBP11.67□□□□□ -0.54
RAPGEF6-214ENST00000515170 CPSF1Q10570 1443 aaKnown RBP11.67□□□□□ -0.54
RAPGEF6-214ENST00000515170 SIRT2Q8IXJ6 389 aa11.67□□□□□ -0.54
RAPGEF6-214ENST00000515170 TNPO1Q92973 898 aaKnown RBP11.67□□□□□ -0.54
RAPGEF6-214ENST00000515170 MCMDC2Q4G0Z9 681 aa11.67□□□□□ -0.54
RAPGEF6-214ENST00000515170 C1orf167Q5SNV9 1468 aa11.67□□□□□ -0.54
RAPGEF6-214ENST00000515170 ZSCAN31Q96LW9 406 aaPredicted RBP11.67□□□□□ -0.54
RAPGEF6-214ENST00000515170 BRMS1Q9HCU9 246 aa11.67□□□□□ -0.54
RAPGEF6-214ENST00000515170 CRKLP46109 303 aaKnown RBP11.66□□□□□ -0.54
RAPGEF6-214ENST00000515170 KRT85P78386 507 aa11.66□□□□□ -0.54
RAPGEF6-214ENST00000515170 CRACR2BQ8N4Y2 399 aaPredicted RBP11.66□□□□□ -0.54
RAPGEF6-214ENST00000515170 PUS3Q9BZE2 481 aaKnown RBP11.66□□□□□ -0.54
RAPGEF6-214ENST00000515170 GSPT1P15170 499 aaKnown RBP11.66□□□□□ -0.54
RAPGEF6-214ENST00000515170 MAGEB6Q8N7X4 407 aa11.66□□□□□ -0.54
RAPGEF6-214ENST00000515170 XAGE2Q96GT9 111 aa11.66□□□□□ -0.54
RAPGEF6-214ENST00000515170 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.66□□□□□ -0.542e-7■■■■□ 20.6
RAPGEF6-214ENST00000515170 TCEAL9Q9UHQ7 104 aa11.66□□□□□ -0.54
RAPGEF6-214ENST00000515170 SLC4A4Q9Y6R1 1079 aa11.66□□□□□ -0.54
RAPGEF6-214ENST00000515170 ZGPATQ8N5A5 531 aaKnown RBP11.66□□□□□ -0.54
RAPGEF6-214ENST00000515170 KCNQ2O43526 872 aa11.65□□□□□ -0.54
RAPGEF6-214ENST00000515170 KINO60870 393 aaKnown RBP11.65□□□□□ -0.54
RAPGEF6-214ENST00000515170 SPATA32Q96LK8 384 aa11.65□□□□□ -0.54
RAPGEF6-214ENST00000515170 PDE8AO60658 829 aa11.65□□□□□ -0.54
RAPGEF6-214ENST00000515170 UQCRFS1P1P0C7P4 283 aa11.65□□□□□ -0.54
RAPGEF6-214ENST00000515170 RXRAP19793 462 aa11.65□□□□□ -0.54
RAPGEF6-214ENST00000515170 GJB2P29033 226 aa11.65□□□□□ -0.54
RAPGEF6-214ENST00000515170 PICALMQ13492 652 aa11.65□□□□□ -0.54
RAPGEF6-214ENST00000515170 TTF1Q15361 905 aaPredicted RBP11.65□□□□□ -0.54
RAPGEF6-214ENST00000515170 USPL1Q5W0Q7 1092 aa11.65□□□□□ -0.54
RAPGEF6-214ENST00000515170 SYNE4Q8N205 404 aa11.65□□□□□ -0.54
RAPGEF6-214ENST00000515170 STX8Q9UNK0 236 aa11.65□□□□□ -0.54
RAPGEF6-214ENST00000515170 SETBP1Q9Y6X0 1596 aa11.65□□□□□ -0.54
RAPGEF6-214ENST00000515170 CAMK4Q16566 473 aa11.65□□□□□ -0.55
RAPGEF6-214ENST00000515170 NAA16Q6N069 864 aaPredicted RBP11.65□□□□□ -0.55
RAPGEF6-214ENST00000515170 TMEM67Q5HYA8 995 aa11.64□□□□□ -0.55
RAPGEF6-214ENST00000515170 SSH3Q8TE77 659 aa11.64□□□□□ -0.55
RAPGEF6-214ENST00000515170 VAT1LQ9HCJ6 419 aa11.64□□□□□ -0.55
RAPGEF6-214ENST00000515170 PREX1Q8TCU6 1659 aa11.64□□□□□ -0.55
RAPGEF6-214ENST00000515170 TTC41PQ6P2S7 1318 aa11.64□□□□□ -0.55
RAPGEF6-214ENST00000515170 TLR7Q9NYK1 1049 aaKnown RBP11.64□□□□□ -0.55
RAPGEF6-214ENST00000515170 SLC12A7Q9Y666 1083 aa11.64□□□□□ -0.55
RAPGEF6-214ENST00000515170 ADGRB1O14514 1584 aa11.64□□□□□ -0.55
RAPGEF6-214ENST00000515170 ZNF444Q8N0Y2 327 aaPredicted RBP11.64□□□□□ -0.55
RAPGEF6-214ENST00000515170 USP26Q9BXU7 913 aa11.64□□□□□ -0.55
RAPGEF6-214ENST00000515170 ZC3H12CQ9C0D7 883 aaKnown RBP11.64□□□□□ -0.55
RAPGEF6-214ENST00000515170 TSPY2A6NKD2 308 aa11.63□□□□□ -0.55
RAPGEF6-214ENST00000515170 UNC5CLQ8IV45 518 aa11.63□□□□□ -0.55
RAPGEF6-214ENST00000515170 NYXQ9GZU5 481 aa11.63□□□□□ -0.55
RAPGEF6-214ENST00000515170 GREM2Q9H772 168 aa11.63□□□□□ -0.55
RAPGEF6-214ENST00000515170 PNPLA6Q8IY17 1366 aa11.63□□□□□ -0.55
RAPGEF6-214ENST00000515170 NASPP49321 788 aaPredicted RBP11.63□□□□□ -0.55
RAPGEF6-214ENST00000515170 MFSD6Q6ZSS7 791 aa11.63□□□□□ -0.55
RAPGEF6-214ENST00000515170 IQCA1Q86XH1 822 aa11.63□□□□□ -0.55
RAPGEF6-214ENST00000515170 SEC62Q99442 399 aaKnown RBP11.63□□□□□ -0.55
RAPGEF6-214ENST00000515170 ZKSCAN3Q9BRR0 538 aa11.63□□□□□ -0.55
RAPGEF6-214ENST00000515170 KLF18A0A0U1RQI7 1052 aa11.63□□□□□ -0.55
RAPGEF6-214ENST00000515170 ZAP70P43403 619 aa11.63□□□□□ -0.55
RAPGEF6-214ENST00000515170 PDE4CQ08493 712 aa11.63□□□□□ -0.55
RAPGEF6-214ENST00000515170 KDM4FA0A1W2PPD8 638 aa11.62□□□□□ -0.55
RAPGEF6-214ENST00000515170 GOLGA8AA7E2F4 631 aa11.62□□□□□ -0.55
RAPGEF6-214ENST00000515170 MBD3O95983 291 aa11.62□□□□□ -0.55
RAPGEF6-214ENST00000515170 FAM196AQ6ZSG2 479 aa11.62□□□□□ -0.55
RAPGEF6-214ENST00000515170 C8orf76Q96K31 380 aa11.62□□□□□ -0.55
RAPGEF6-214ENST00000515170 TMOD2Q9NZR1 351 aa11.62□□□□□ -0.55
RAPGEF6-214ENST00000515170 PARP3Q9Y6F1 533 aa11.62□□□□□ -0.55
RAPGEF6-214ENST00000515170 SNAP23O00161 211 aa11.62□□□□□ -0.55
RAPGEF6-214ENST00000515170 CREB3L3Q68CJ9 461 aa11.62□□□□□ -0.55
RAPGEF6-214ENST00000515170 Q6ZUG5 572 aa11.62□□□□□ -0.55
RAPGEF6-214ENST00000515170 MROH2AA6NES4 1674 aa11.62□□□□□ -0.55
RAPGEF6-214ENST00000515170 KDRP35968 1356 aa11.62□□□□□ -0.55
RAPGEF6-214ENST00000515170 RNF113AO15541 343 aaKnown RBP11.62□□□□□ -0.55
RAPGEF6-214ENST00000515170 AK2P54819 239 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 299.1 ms