RNA–Protein interactions for RNA: ENST00000515091.1

SPOCK1-210, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 2

Gene SPOCK1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-210ENST00000515091 KIAA1551Q9HCM1 1747 aa16.38■□□□□ 0.21
SPOCK1-210ENST00000515091 RTL9Q8NET4 1388 aa16.38■□□□□ 0.21
SPOCK1-210ENST00000515091 CEP85Q6P2H3 762 aa16.37■□□□□ 0.21
SPOCK1-210ENST00000515091 PDZRN3Q9UPQ7 1066 aa16.37■□□□□ 0.21
SPOCK1-210ENST00000515091 PCDHB15Q9Y5E8 787 aa16.37■□□□□ 0.21
SPOCK1-210ENST00000515091 LRP5O75197 1615 aa16.37■□□□□ 0.21
SPOCK1-210ENST00000515091 COL11A2P13942 1736 aaPredicted RBP16.36■□□□□ 0.21
SPOCK1-210ENST00000515091 NEFLP07196 543 aa16.36■□□□□ 0.21
SPOCK1-210ENST00000515091 SRGNP10124 158 aa16.36■□□□□ 0.21
SPOCK1-210ENST00000515091 HOXA10P31260 410 aaPredicted RBP16.36■□□□□ 0.21
SPOCK1-210ENST00000515091 TGFB2P61812 414 aa16.36■□□□□ 0.21
SPOCK1-210ENST00000515091 ATP8B2P98198 1209 aa16.36■□□□□ 0.21
SPOCK1-210ENST00000515091 CCDC152Q4G0S7 254 aa16.36■□□□□ 0.21
SPOCK1-210ENST00000515091 GREM2Q9H772 168 aa16.36■□□□□ 0.21
SPOCK1-210ENST00000515091 PNMA6EA0A0J9YXQ4 647 aa16.35■□□□□ 0.21
SPOCK1-210ENST00000515091 KCNA3P22001 575 aa16.35■□□□□ 0.21
SPOCK1-210ENST00000515091 CHRNA5P30532 468 aa16.35■□□□□ 0.21
SPOCK1-210ENST00000515091 RFX5P48382 616 aaPredicted RBP16.35■□□□□ 0.21
SPOCK1-210ENST00000515091 FAM161AQ3B820 660 aa16.35■□□□□ 0.21
SPOCK1-210ENST00000515091 C2CD5Q86YS7 1000 aa16.35■□□□□ 0.21
SPOCK1-210ENST00000515091 SIRT2Q8IXJ6 389 aa16.35■□□□□ 0.21
SPOCK1-210ENST00000515091 RPAP2Q8IXW5 612 aaPredicted RBP16.35■□□□□ 0.21
SPOCK1-210ENST00000515091 CCDC85AQ96PX6 553 aaPredicted RBP16.35■□□□□ 0.21
SPOCK1-210ENST00000515091 SEC31BQ9NQW1 1179 aa16.35■□□□□ 0.21
SPOCK1-210ENST00000515091 COL4A1P02462 1669 aa16.34■□□□□ 0.21
SPOCK1-210ENST00000515091 H0YIN7 160 aa16.34■□□□□ 0.21
SPOCK1-210ENST00000515091 NPR1P16066 1061 aa16.34■□□□□ 0.21
SPOCK1-210ENST00000515091 ITGA6P23229 1130 aa16.34■□□□□ 0.21
SPOCK1-210ENST00000515091 POLA2Q14181 598 aa16.34■□□□□ 0.21
SPOCK1-210ENST00000515091 SSH3Q8TE77 659 aa16.34■□□□□ 0.21
SPOCK1-210ENST00000515091 MASTLQ96GX5 879 aa16.34■□□□□ 0.21
SPOCK1-210ENST00000515091 DLEC1Q9Y238 1755 aa16.33■□□□□ 0.21
SPOCK1-210ENST00000515091 A0A0G2JLW4 131 aa16.33■□□□□ 0.2
SPOCK1-210ENST00000515091 SRGAP3O43295 1099 aa16.33■□□□□ 0.2
SPOCK1-210ENST00000515091 DPEP1P16444 411 aa16.33■□□□□ 0.2
SPOCK1-210ENST00000515091 STYK1Q6J9G0 422 aa16.33■□□□□ 0.2
SPOCK1-210ENST00000515091 RPGRQ92834 1020 aaKnown RBP16.33■□□□□ 0.2
SPOCK1-210ENST00000515091 CRAMP1Q96RY5 1269 aa16.33■□□□□ 0.2
SPOCK1-210ENST00000515091 FHDC1Q9C0D6 1143 aaPredicted RBP16.33■□□□□ 0.2
SPOCK1-210ENST00000515091 PPP1R1BQ9UD71 204 aaPredicted RBP16.33■□□□□ 0.2
SPOCK1-210ENST00000515091 CHMP3Q9Y3E7 222 aa16.33■□□□□ 0.2
SPOCK1-210ENST00000515091 TAF1P21675 1872 aa16.32■□□□□ 0.2
SPOCK1-210ENST00000515091 IFIT5Q13325 482 aaKnown RBP16.32■□□□□ 0.2
SPOCK1-210ENST00000515091 CCDC57Q2TAC2 916 aa16.32■□□□□ 0.2
SPOCK1-210ENST00000515091 DDX46Q7L014 1031 aaKnown RBP16.32■□□□□ 0.2
SPOCK1-210ENST00000515091 CELF1Q92879 486 aaKnown RBP16.32■□□□□ 0.2
SPOCK1-210ENST00000515091 RBM17Q96I25 401 aaKnown RBP16.32■□□□□ 0.2
SPOCK1-210ENST00000515091 ANKRD18BA2A2Z9 1011 aa16.31■□□□□ 0.2
SPOCK1-210ENST00000515091 PTPN12Q05209 780 aaKnown RBP16.31■□□□□ 0.2
SPOCK1-210ENST00000515091 GRAPQ13588 217 aa16.31■□□□□ 0.2
SPOCK1-210ENST00000515091 KLHL34Q8N239 644 aa16.31■□□□□ 0.2
SPOCK1-210ENST00000515091 NLGN2Q8NFZ4 835 aa16.31■□□□□ 0.2
SPOCK1-210ENST00000515091 GRAPLQ8TC17 118 aaPredicted RBP16.31■□□□□ 0.2
SPOCK1-210ENST00000515091 ALDH1B1P30837 517 aa16.3■□□□□ 0.2
SPOCK1-210ENST00000515091 RPS8P62241 208 aaKnown RBP16.3■□□□□ 0.2
SPOCK1-210ENST00000515091 ERICH6BQ5W0A0 696 aa16.3■□□□□ 0.2
SPOCK1-210ENST00000515091 KLHDC4Q8TBB5 520 aa16.3■□□□□ 0.2
SPOCK1-210ENST00000515091 ZNF622Q969S3 477 aaKnown RBP eCLIP16.3■□□□□ 0.2
SPOCK1-210ENST00000515091 ZNF594Q96JF6 807 aaPredicted RBP16.3■□□□□ 0.2
SPOCK1-210ENST00000515091 CDC5LQ99459 802 aaKnown RBP16.3■□□□□ 0.2
SPOCK1-210ENST00000515091 SYT17Q9BSW7 474 aa16.3■□□□□ 0.2
SPOCK1-210ENST00000515091 COPRSQ9NQ92 184 aa16.3■□□□□ 0.2
SPOCK1-210ENST00000515091 BRCA1P38398 1863 aaKnown RBP16.29■□□□□ 0.2
SPOCK1-210ENST00000515091 CNKSR1Q969H4 720 aa16.29■□□□□ 0.2
SPOCK1-210ENST00000515091 PA2G4Q9UQ80 394 aaKnown RBP16.29■□□□□ 0.2
SPOCK1-210ENST00000515091 HMMRO75330 724 aa16.28■□□□□ 0.2
SPOCK1-210ENST00000515091 BBOX1O75936 387 aa16.28■□□□□ 0.2
SPOCK1-210ENST00000515091 HDAC1Q13547 482 aaPredicted RBP16.28■□□□□ 0.2
SPOCK1-210ENST00000515091 ANKRD18AQ8IVF6 992 aa16.28■□□□□ 0.2
SPOCK1-210ENST00000515091 SLX4Q8IY92 1834 aa16.27■□□□□ 0.2
SPOCK1-210ENST00000515091 TTLL6Q8N841 843 aa16.27■□□□□ 0.2
SPOCK1-210ENST00000515091 C7orf43Q8WVR3 580 aa16.27■□□□□ 0.2
SPOCK1-210ENST00000515091 PUS3Q9BZE2 481 aaKnown RBP16.27■□□□□ 0.2
SPOCK1-210ENST00000515091 BSDC1Q9NW68 430 aaPredicted RBP16.27■□□□□ 0.2
SPOCK1-210ENST00000515091 PIM2Q9P1W9 311 aa16.27■□□□□ 0.2
SPOCK1-210ENST00000515091 NOP58Q9Y2X3 529 aaKnown RBP16.27■□□□□ 0.2
SPOCK1-210ENST00000515091 IGHDP01880 384 aa16.26■□□□□ 0.19
SPOCK1-210ENST00000515091 IGHMBP2P38935 993 aaKnown RBP16.26■□□□□ 0.19
SPOCK1-210ENST00000515091 LRRC24Q50LG9 513 aa16.26■□□□□ 0.19
SPOCK1-210ENST00000515091 TAF7LQ5H9L4 462 aa16.26■□□□□ 0.19
SPOCK1-210ENST00000515091 PRPF40BQ6NWY9 871 aaKnown RBP16.26■□□□□ 0.19
SPOCK1-210ENST00000515091 LDHAL6AQ6ZMR3 332 aa16.26■□□□□ 0.19
SPOCK1-210ENST00000515091 ATG9AQ7Z3C6 839 aa16.26■□□□□ 0.19
SPOCK1-210ENST00000515091 SLC51AQ86UW1 340 aa16.26■□□□□ 0.19
SPOCK1-210ENST00000515091 FBXO3Q9UK99 471 aa16.26■□□□□ 0.19
SPOCK1-210ENST00000515091 RIPOR2Q9Y4F9 1068 aa16.26■□□□□ 0.19
SPOCK1-210ENST00000515091 SPEF2Q9C093 1822 aa16.26■□□□□ 0.19
SPOCK1-210ENST00000515091 CACNA1SQ13698 1873 aa16.25■□□□□ 0.19
SPOCK1-210ENST00000515091 EYA2O00167 538 aa16.25■□□□□ 0.19
SPOCK1-210ENST00000515091 PPEF1O14829 653 aaPredicted RBP16.25■□□□□ 0.19
SPOCK1-210ENST00000515091 TMC4Q7Z404 712 aa16.25■□□□□ 0.19
SPOCK1-210ENST00000515091 MPHOSPH8Q99549 860 aa16.25■□□□□ 0.19
SPOCK1-210ENST00000515091 DCTPP1Q9H773 170 aa16.25■□□□□ 0.19
SPOCK1-210ENST00000515091 SURF6O75683 361 aaKnown RBP16.24■□□□□ 0.19
SPOCK1-210ENST00000515091 CIAO1O76071 339 aa16.24■□□□□ 0.19
SPOCK1-210ENST00000515091 SP8Q8IXZ3 490 aa16.24■□□□□ 0.19
SPOCK1-210ENST00000515091 SIL1Q9H173 461 aa16.24■□□□□ 0.19
SPOCK1-210ENST00000515091 RWDD1Q9H446 243 aaPredicted RBP16.24■□□□□ 0.19
SPOCK1-210ENST00000515091 MINPP1Q9UNW1 487 aa16.24■□□□□ 0.19
SPOCK1-210ENST00000515091 ATP6V0A2Q9Y487 856 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms