RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 TARSP26639 723 aaKnown RBP8.94□□□□□ -0.98
HMGCS1-207ENST00000514610 PLCB3Q01970 1234 aa8.94□□□□□ -0.98
HMGCS1-207ENST00000514610 TAGLNQ01995 201 aaKnown RBP8.94□□□□□ -0.98
HMGCS1-207ENST00000514610 FAM182BQ5T319 152 aa8.94□□□□□ -0.98
HMGCS1-207ENST00000514610 FOXR1Q6PIV2 292 aa8.94□□□□□ -0.98
HMGCS1-207ENST00000514610 ZNF438Q7Z4V0 828 aa8.94□□□□□ -0.98
HMGCS1-207ENST00000514610 NLRP13Q86W25 1043 aa8.93□□□□□ -0.98
HMGCS1-207ENST00000514610 TTC16Q8NEE8 873 aa8.93□□□□□ -0.98
HMGCS1-207ENST00000514610 ZNF428Q96B54 188 aa8.93□□□□□ -0.98
HMGCS1-207ENST00000514610 SETDB2Q96T68 719 aa8.93□□□□□ -0.98
HMGCS1-207ENST00000514610 CNTN3Q9P232 1028 aa8.93□□□□□ -0.98
HMGCS1-207ENST00000514610 NFKB1P19838 968 aa8.92□□□□□ -0.98
HMGCS1-207ENST00000514610 COL19A1Q14993 1142 aa8.92□□□□□ -0.98
HMGCS1-207ENST00000514610 CHRDQ9H2X0 955 aa8.92□□□□□ -0.98
HMGCS1-207ENST00000514610 MAPK8P45983 427 aa8.91□□□□□ -0.98
HMGCS1-207ENST00000514610 RNFT1Q5M7Z0 435 aa8.91□□□□□ -0.98
HMGCS1-207ENST00000514610 USPL1Q5W0Q7 1092 aa8.91□□□□□ -0.98
HMGCS1-207ENST00000514610 BHMTQ93088 406 aa8.91□□□□□ -0.98
HMGCS1-207ENST00000514610 BCL2L13Q9BXK5 485 aa8.91□□□□□ -0.98
HMGCS1-207ENST00000514610 WWC3Q9ULE0 1092 aa8.91□□□□□ -0.98
HMGCS1-207ENST00000514610 AMOTL2Q9Y2J4 779 aa8.91□□□□□ -0.98
HMGCS1-207ENST00000514610 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.91□□□□□ -0.98
HMGCS1-207ENST00000514610 MMP20O60882 483 aa8.9□□□□□ -0.98
HMGCS1-207ENST00000514610 CYP2E1P05181 493 aaPredicted RBP8.9□□□□□ -0.98
HMGCS1-207ENST00000514610 RARAP10276 462 aa8.9□□□□□ -0.98
HMGCS1-207ENST00000514610 ENOX2Q16206 610 aaKnown RBP8.9□□□□□ -0.98
HMGCS1-207ENST00000514610 EAPPQ56P03 285 aaPredicted RBP8.9□□□□□ -0.98
HMGCS1-207ENST00000514610 C1orf127Q8N9H9 656 aa8.9□□□□□ -0.98
HMGCS1-207ENST00000514610 SNX29Q8TEQ0 813 aa8.9□□□□□ -0.98
HMGCS1-207ENST00000514610 GIPC2Q8TF65 315 aa8.9□□□□□ -0.98
HMGCS1-207ENST00000514610 CSRNP1Q96S65 589 aa8.9□□□□□ -0.98
HMGCS1-207ENST00000514610 ABI2Q9NYB9 513 aaPredicted RBP8.9□□□□□ -0.98
HMGCS1-207ENST00000514610 STK17AQ9UEE5 414 aa8.9□□□□□ -0.98
HMGCS1-207ENST00000514610 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.9□□□□□ -0.98
HMGCS1-207ENST00000514610 PNMA6FA0A0J9YX94 578 aa8.89□□□□□ -0.99
HMGCS1-207ENST00000514610 RBM47A0AV96 593 aaKnown RBP8.89□□□□□ -0.99
HMGCS1-207ENST00000514610 EIF1AYO14602 144 aaKnown RBP8.89□□□□□ -0.99
HMGCS1-207ENST00000514610 BMP4P12644 408 aa8.89□□□□□ -0.99
HMGCS1-207ENST00000514610 MX2P20592 715 aa8.89□□□□□ -0.99
HMGCS1-207ENST00000514610 INSM1Q01101 510 aaPredicted RBP8.89□□□□□ -0.99
HMGCS1-207ENST00000514610 KRT76Q01546 638 aa8.89□□□□□ -0.99
HMGCS1-207ENST00000514610 PNMA5Q96PV4 448 aa8.89□□□□□ -0.99
HMGCS1-207ENST00000514610 COL25A1Q9BXS0 654 aaPredicted RBP8.89□□□□□ -0.99
HMGCS1-207ENST00000514610 ZFYVE28Q9HCC9 887 aa8.89□□□□□ -0.99
HMGCS1-207ENST00000514610 PHACTR2O75167 634 aa8.88□□□□□ -0.99
HMGCS1-207ENST00000514610 ZNF16P17020 682 aaPredicted RBP8.88□□□□□ -0.99
HMGCS1-207ENST00000514610 OR13H1Q8NG92 308 aa8.88□□□□□ -0.99
HMGCS1-207ENST00000514610 RNF19AQ9NV58 838 aa8.88□□□□□ -0.99
HMGCS1-207ENST00000514610 KLF15Q9UIH9 416 aa8.88□□□□□ -0.99
HMGCS1-207ENST00000514610 EREGO14944 169 aa8.87□□□□□ -0.99
HMGCS1-207ENST00000514610 MAP3K6O95382 1288 aa8.87□□□□□ -0.99
HMGCS1-207ENST00000514610 ZNF468Q5VIY5 522 aaPredicted RBP8.87□□□□□ -0.99
HMGCS1-207ENST00000514610 TTC39BQ5VTQ0 682 aaPredicted RBP8.87□□□□□ -0.99
HMGCS1-207ENST00000514610 SYT9Q86SS6 491 aa8.87□□□□□ -0.99
HMGCS1-207ENST00000514610 MBIPQ9NS73 344 aa8.87□□□□□ -0.99
HMGCS1-207ENST00000514610 PRR12Q9ULL5 1215 aa8.87□□□□□ -0.99
HMGCS1-207ENST00000514610 UNCXA6NJT0 531 aa8.86□□□□□ -0.99
HMGCS1-207ENST00000514610 CPNE3O75131 537 aaKnown RBP8.86□□□□□ -0.99
HMGCS1-207ENST00000514610 POLR3DP05423 398 aaPredicted RBP8.86□□□□□ -0.99
HMGCS1-207ENST00000514610 LDHBP07195 334 aaKnown RBP8.86□□□□□ -0.99
HMGCS1-207ENST00000514610 PCBP4P57723 403 aaKnown RBP8.86□□□□□ -0.99
HMGCS1-207ENST00000514610 COL13A1Q5TAT6 717 aaPredicted RBP8.86□□□□□ -0.99
HMGCS1-207ENST00000514610 SLC16A10Q8TF71 515 aa8.86□□□□□ -0.99
HMGCS1-207ENST00000514610 DNAJC25Q9H1X3 360 aa8.86□□□□□ -0.99
HMGCS1-207ENST00000514610 EFCC1Q9HA90 598 aa8.86□□□□□ -0.99
HMGCS1-207ENST00000514610 TLR7Q9NYK1 1049 aaKnown RBP8.86□□□□□ -0.99
HMGCS1-207ENST00000514610 KANSL3Q9P2N6 904 aa8.86□□□□□ -0.99
HMGCS1-207ENST00000514610 NEFLP07196 543 aa8.85□□□□□ -0.99
HMGCS1-207ENST00000514610 DHX32Q7L7V1 743 aaKnown RBP8.85□□□□□ -0.99
HMGCS1-207ENST00000514610 IGF1RP08069 1367 aa8.85□□□□□ -0.99
HMGCS1-207ENST00000514610 ZBTB42B2RXF5 422 aa8.84□□□□□ -0.99
HMGCS1-207ENST00000514610 HOXD8P13378 290 aaPredicted RBP8.84□□□□□ -0.99
HMGCS1-207ENST00000514610 IRS1P35568 1242 aa8.84□□□□□ -0.99
HMGCS1-207ENST00000514610 IRF7Q92985 503 aa8.84□□□□□ -0.99
HMGCS1-207ENST00000514610 CCDC74AQ96AQ1 378 aa8.84□□□□□ -0.99
HMGCS1-207ENST00000514610 SIN3BO75182 1162 aa8.83□□□□□ -1
HMGCS1-207ENST00000514610 PRPF40AO75400 957 aaKnown RBP8.83□□□□□ -1
HMGCS1-207ENST00000514610 ARAFP10398 606 aa8.83□□□□□ -1
HMGCS1-207ENST00000514610 CES1P23141 567 aa8.83□□□□□ -1
HMGCS1-207ENST00000514610 SOX18P35713 384 aa8.83□□□□□ -1
HMGCS1-207ENST00000514610 RBM25P49756 843 aaKnown RBP8.83□□□□□ -1
HMGCS1-207ENST00000514610 PI16Q6UXB8 463 aa8.83□□□□□ -1
HMGCS1-207ENST00000514610 CNTNAP3BQ96NU0 1288 aa8.83□□□□□ -1
HMGCS1-207ENST00000514610 MDFIQ99750 246 aa8.83□□□□□ -1
HMGCS1-207ENST00000514610 DUSP9Q99956 384 aaKnown RBP8.83□□□□□ -1
HMGCS1-207ENST00000514610 CNTNAP3Q9BZ76 1288 aa8.83□□□□□ -1
HMGCS1-207ENST00000514610 AVENQ9NQS1 362 aaPredicted RBP8.83□□□□□ -1
HMGCS1-207ENST00000514610 PSAPP07602 524 aa8.82□□□□□ -1
HMGCS1-207ENST00000514610 MAP2K3P46734 347 aa8.82□□□□□ -1
HMGCS1-207ENST00000514610 MLLT1Q03111 559 aaPredicted RBP8.82□□□□□ -1
HMGCS1-207ENST00000514610 NEUROD1Q13562 356 aa8.82□□□□□ -1
HMGCS1-207ENST00000514610 FCHSD1Q86WN1 690 aa8.82□□□□□ -1
HMGCS1-207ENST00000514610 GALNT12Q8IXK2 581 aa8.82□□□□□ -1
HMGCS1-207ENST00000514610 EPS8L3Q8TE67 593 aaKnown RBP8.82□□□□□ -1
HMGCS1-207ENST00000514610 NSUN5Q96P11 429 aaKnown RBP8.82□□□□□ -1
HMGCS1-207ENST00000514610 LATS2Q9NRM7 1088 aa8.82□□□□□ -1
HMGCS1-207ENST00000514610 DNAJB12Q9NXW2 375 aaKnown RBP8.82□□□□□ -1
HMGCS1-207ENST00000514610 SALL4Q9UJQ4 1053 aa8.82□□□□□ -1
HMGCS1-207ENST00000514610 NEURL1BA8MQ27 555 aa8.81□□□□□ -1
HMGCS1-207ENST00000514610 PHF20L1A8MW92 1017 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms