RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 OLFM4Q6UX06 510 aa25.61■■□□□ 1.69
USP53-208ENST00000514305 KIF16BQ96L93 1317 aa25.61■■□□□ 1.69
USP53-208ENST00000514305 IQCA1LA6NCM1 817 aa25.6■■□□□ 1.69
USP53-208ENST00000514305 IPO8O15397 1037 aaKnown RBP25.6■■□□□ 1.69
USP53-208ENST00000514305 LRP10Q7Z4F1 713 aa25.6■■□□□ 1.69
USP53-208ENST00000514305 RIC3Q7Z5B4 369 aa25.6■■□□□ 1.69
USP53-208ENST00000514305 MRPL50Q8N5N7 158 aaKnown RBP25.6■■□□□ 1.69
USP53-208ENST00000514305 PLBD2Q8NHP8 589 aa25.6■■□□□ 1.69
USP53-208ENST00000514305 NTSR2O95665 410 aa25.59■■□□□ 1.69
USP53-208ENST00000514305 FKBP5Q13451 457 aaPredicted RBP25.59■■□□□ 1.69
USP53-208ENST00000514305 CC2D2BQ6DHV5 1058 aa25.59■■□□□ 1.69
USP53-208ENST00000514305 PHAXQ9H814 394 aaKnown RBP25.59■■□□□ 1.69
USP53-208ENST00000514305 PTPRCP08575 1304 aa25.59■■□□□ 1.69
USP53-208ENST00000514305 CACNA1FO60840 1977 aa25.58■■□□□ 1.69
USP53-208ENST00000514305 HOXA10P31260 410 aaPredicted RBP25.58■■□□□ 1.69
USP53-208ENST00000514305 IARSP41252 1262 aaKnown RBP25.58■■□□□ 1.69
USP53-208ENST00000514305 SYNE4Q8N205 404 aa25.58■■□□□ 1.69
USP53-208ENST00000514305 RBM17Q96I25 401 aaKnown RBP25.58■■□□□ 1.69
USP53-208ENST00000514305 RCAN3Q9UKA8 241 aa25.58■■□□□ 1.69
USP53-208ENST00000514305 PSMD1Q99460 953 aa25.57■■□□□ 1.68
USP53-208ENST00000514305 UTP14AQ9BVJ6 771 aaKnown RBP25.57■■□□□ 1.68
USP53-208ENST00000514305 NEXNQ0ZGT2 675 aa25.56■■□□□ 1.68
USP53-208ENST00000514305 GRIPAP1Q4V328 841 aa25.56■■□□□ 1.68
USP53-208ENST00000514305 CHADLQ6NUI6 762 aa25.56■■□□□ 1.68
USP53-208ENST00000514305 KSR2Q6VAB6 950 aa25.56■■□□□ 1.68
USP53-208ENST00000514305 L3MBTL3Q96JM7 780 aaPredicted RBP25.56■■□□□ 1.68
USP53-208ENST00000514305 NLRP3Q96P20 1036 aa25.56■■□□□ 1.68
USP53-208ENST00000514305 IFFO2Q5TF58 517 aa25.55■■□□□ 1.68
USP53-208ENST00000514305 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.55■■□□□ 1.68
USP53-208ENST00000514305 JDP2Q8WYK2 163 aa25.55■■□□□ 1.68
USP53-208ENST00000514305 CRAMP1Q96RY5 1269 aa25.55■■□□□ 1.68
USP53-208ENST00000514305 BCL2L13Q9BXK5 485 aa25.55■■□□□ 1.68
USP53-208ENST00000514305 RNF123Q5XPI4 1314 aa25.55■■□□□ 1.68
USP53-208ENST00000514305 ARHGAP45Q92619 1136 aa25.54■■□□□ 1.68
USP53-208ENST00000514305 API5Q9BZZ5 524 aaKnown RBP25.54■■□□□ 1.68
USP53-208ENST00000514305 TMX4Q9H1E5 349 aaPredicted RBP25.54■■□□□ 1.68
USP53-208ENST00000514305 ZNF541Q9H0D2 1346 aa25.54■■□□□ 1.68
USP53-208ENST00000514305 PPEF1O14829 653 aaPredicted RBP25.53■■□□□ 1.68
USP53-208ENST00000514305 JMYQ8N9B5 988 aa25.53■■□□□ 1.68
USP53-208ENST00000514305 SNED1Q8TER0 1413 aa25.53■■□□□ 1.68
USP53-208ENST00000514305 LAMB2P55268 1798 aa25.52■■□□□ 1.68
USP53-208ENST00000514305 PI4KAP2A4QPH2 592 aa25.52■■□□□ 1.68
USP53-208ENST00000514305 G2E3Q7L622 706 aa25.52■■□□□ 1.68
USP53-208ENST00000514305 PI4KAP1Q8N8J0 262 aa25.52■■□□□ 1.68
USP53-208ENST00000514305 FZD9O00144 591 aa25.51■■□□□ 1.67
USP53-208ENST00000514305 MS4A1P11836 297 aa25.51■■□□□ 1.67
USP53-208ENST00000514305 PIP4P2Q8N4L2 257 aa25.51■■□□□ 1.67
USP53-208ENST00000514305 TAF1DQ9H5J8 278 aaPredicted RBP25.51■■□□□ 1.67
USP53-208ENST00000514305 NOB1Q9ULX3 412 aaKnown RBP25.51■■□□□ 1.67
USP53-208ENST00000514305 POTEIP0CG38 1075 aa25.5■■□□□ 1.67
USP53-208ENST00000514305 POTEJP0CG39 1038 aa25.5■■□□□ 1.67
USP53-208ENST00000514305 TCIRG1Q13488 830 aa25.5■■□□□ 1.67
USP53-208ENST00000514305 SLC10A5Q5PT55 438 aa25.5■■□□□ 1.67
USP53-208ENST00000514305 C3orf67Q6ZVT6 689 aa25.5■■□□□ 1.67
USP53-208ENST00000514305 LDHDQ86WU2 507 aa25.5■■□□□ 1.67
USP53-208ENST00000514305 DNAAF4Q8WXU2 420 aa25.5■■□□□ 1.67
USP53-208ENST00000514305 HACL1Q9UJ83 578 aa25.5■■□□□ 1.67
USP53-208ENST00000514305 MAP3K2Q9Y2U5 619 aa25.5■■□□□ 1.67
USP53-208ENST00000514305 BCAR3O75815 825 aa25.49■■□□□ 1.67
USP53-208ENST00000514305 NLRP10Q86W26 655 aa25.49■■□□□ 1.67
USP53-208ENST00000514305 GPC2Q8N158 579 aa25.49■■□□□ 1.67
USP53-208ENST00000514305 FRAT1Q92837 279 aaPredicted RBP25.49■■□□□ 1.67
USP53-208ENST00000514305 METTL22Q9BUU2 404 aaPredicted RBP25.49■■□□□ 1.67
USP53-208ENST00000514305 TRMT112Q9UI30 125 aaKnown RBP25.49■■□□□ 1.67
USP53-208ENST00000514305 EIF6P56537 245 aaKnown RBP25.48■■□□□ 1.67
USP53-208ENST00000514305 EAPPQ56P03 285 aaPredicted RBP25.48■■□□□ 1.67
USP53-208ENST00000514305 ZKSCAN2Q63HK3 967 aa25.48■■□□□ 1.67
USP53-208ENST00000514305 CENPBP07199 599 aaPredicted RBP25.47■■□□□ 1.67
USP53-208ENST00000514305 LARGE2Q8N3Y3 721 aa25.47■■□□□ 1.67
USP53-208ENST00000514305 ABCC4O15439 1325 aa25.46■■□□□ 1.67
USP53-208ENST00000514305 SH3TC1Q8TE82 1336 aa25.46■■□□□ 1.67
USP53-208ENST00000514305 EPHX2P34913 555 aa25.46■■□□□ 1.67
USP53-208ENST00000514305 TRIM28Q13263 835 aaKnown RBP25.45■■□□□ 1.66
USP53-208ENST00000514305 ATF7IPQ6VMQ6 1270 aa25.45■■□□□ 1.66
USP53-208ENST00000514305 PNMA8AQ86V59 439 aaPredicted RBP25.45■■□□□ 1.66
USP53-208ENST00000514305 MYD88Q99836 296 aa25.45■■□□□ 1.66
USP53-208ENST00000514305 CREBZFQ9NS37 354 aa25.45■■□□□ 1.66
USP53-208ENST00000514305 CLEC11AQ9Y240 323 aa25.45■■□□□ 1.66
USP53-208ENST00000514305 ATP6V0A2Q9Y487 856 aa25.45■■□□□ 1.66
USP53-208ENST00000514305 HCLS1P14317 486 aaPredicted RBP25.44■■□□□ 1.66
USP53-208ENST00000514305 SLC4A10Q6U841 1118 aa25.44■■□□□ 1.66
USP53-208ENST00000514305 CCDC191Q8NCU4 936 aa25.44■■□□□ 1.66
USP53-208ENST00000514305 GJA3Q9Y6H8 435 aa25.44■■□□□ 1.66
USP53-208ENST00000514305 COL4A5P29400 1685 aa25.43■■□□□ 1.66
USP53-208ENST00000514305 HSP90B1P14625 803 aaKnown RBP25.43■■□□□ 1.66
USP53-208ENST00000514305 DDX46Q7L014 1031 aaKnown RBP25.43■■□□□ 1.66
USP53-208ENST00000514305 NIM1KQ8IY84 436 aa25.43■■□□□ 1.66
USP53-208ENST00000514305 LINS1Q8NG48 757 aa25.43■■□□□ 1.66
USP53-208ENST00000514305 ADAMTSL1Q8N6G6 1762 aa25.43■■□□□ 1.66
USP53-208ENST00000514305 PPIP5K2O43314 1243 aa25.42■■□□□ 1.66
USP53-208ENST00000514305 BBOX1O75936 387 aa25.42■■□□□ 1.66
USP53-208ENST00000514305 LMOD1P29536 600 aaPredicted RBP25.42■■□□□ 1.66
USP53-208ENST00000514305 CCT4P50991 539 aaKnown RBP25.42■■□□□ 1.66
USP53-208ENST00000514305 FTSJ3Q8IY81 847 aaKnown RBP25.42■■□□□ 1.66
USP53-208ENST00000514305 SUPT20HQ8NEM7 779 aa25.42■■□□□ 1.66
USP53-208ENST00000514305 ISCA1Q9BUE6 129 aa25.42■■□□□ 1.66
USP53-208ENST00000514305 DDX60Q8IY21 1712 aaKnown RBP25.42■■□□□ 1.66
USP53-208ENST00000514305 FXR2P51116 673 aaKnown RBP eCLIP25.41■■□□□ 1.66
USP53-208ENST00000514305 SRCIN1Q9C0H9 1055 aa25.41■■□□□ 1.66
USP53-208ENST00000514305 VPS33BQ9H267 617 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms