RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 CDC45O75419 566 aa9□□□□□ -0.97
CLIP1-205ENST00000514271 DSG3P32926 999 aa9□□□□□ -0.97
CLIP1-205ENST00000514271 EIF4A1P60842 406 aaKnown RBP9□□□□□ -0.97
CLIP1-205ENST00000514271 EN1Q05925 392 aaPredicted RBP9□□□□□ -0.97
CLIP1-205ENST00000514271 EZH2Q15910 746 aaKnown RBP9□□□□□ -0.97
CLIP1-205ENST00000514271 CCDC87Q9NVE4 849 aa9□□□□□ -0.97
CLIP1-205ENST00000514271 ANKRD36CQ5JPF3 1778 aa9□□□□□ -0.97
CLIP1-205ENST00000514271 UVSSAQ2YD98 709 aa9□□□□□ -0.97
CLIP1-205ENST00000514271 CEP85Q6P2H3 762 aa9□□□□□ -0.97
CLIP1-205ENST00000514271 BCL2L13Q9BXK5 485 aa9□□□□□ -0.97
CLIP1-205ENST00000514271 UPF2Q9HAU5 1272 aaKnown RBP9□□□□□ -0.97
CLIP1-205ENST00000514271 ARFGEF2Q9Y6D5 1785 aa9□□□□□ -0.97
CLIP1-205ENST00000514271 ST3GAL1Q11201 340 aa8.99□□□□□ -0.97
CLIP1-205ENST00000514271 MCM10Q7L590 875 aa8.99□□□□□ -0.97
CLIP1-205ENST00000514271 ZGPATQ8N5A5 531 aaKnown RBP8.99□□□□□ -0.97
CLIP1-205ENST00000514271 ASAP1Q9ULH1 1129 aa8.99□□□□□ -0.97
CLIP1-205ENST00000514271 NAP1L2Q9ULW6 460 aaPredicted RBP8.99□□□□□ -0.97
CLIP1-205ENST00000514271 RTCBQ9Y3I0 505 aaKnown RBP8.99□□□□□ -0.97
CLIP1-205ENST00000514271 NUCB2P80303 420 aa8.99□□□□□ -0.97
CLIP1-205ENST00000514271 PRIMPOLQ96LW4 560 aa8.99□□□□□ -0.97
CLIP1-205ENST00000514271 MBIPQ9NS73 344 aa8.99□□□□□ -0.97
CLIP1-205ENST00000514271 CYP19A1P11511 503 aaPredicted RBP8.99□□□□□ -0.97
CLIP1-205ENST00000514271 ANAPC15P60006 121 aa8.99□□□□□ -0.97
CLIP1-205ENST00000514271 ATP2B3Q16720 1220 aa8.99□□□□□ -0.97
CLIP1-205ENST00000514271 RIC1Q4ADV7 1423 aa8.99□□□□□ -0.97
CLIP1-205ENST00000514271 ARAP2Q8WZ64 1704 aa8.98□□□□□ -0.97
CLIP1-205ENST00000514271 IL25Q9H293 177 aa8.98□□□□□ -0.97
CLIP1-205ENST00000514271 NRXN2Q9P2S2 1712 aa8.98□□□□□ -0.97
CLIP1-205ENST00000514271 GIGYF1O75420 1035 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-205ENST00000514271 UBXN6Q9BZV1 441 aa8.98□□□□□ -0.97
CLIP1-205ENST00000514271 ZNF652Q9Y2D9 606 aa8.98□□□□□ -0.97
CLIP1-205ENST00000514271 HSP90AB3PQ58FF7 597 aa8.97□□□□□ -0.97
CLIP1-205ENST00000514271 GZF1Q9H116 711 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-205ENST00000514271 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.97□□□□□ -0.97
CLIP1-205ENST00000514271 KIF13BQ9NQT8 1826 aa8.97□□□□□ -0.97
CLIP1-205ENST00000514271 ERVV-1B6SEH8 477 aa8.97□□□□□ -0.97
CLIP1-205ENST00000514271 SDSP20132 328 aa8.97□□□□□ -0.97
CLIP1-205ENST00000514271 SLC20A2Q08357 652 aa8.97□□□□□ -0.97
CLIP1-205ENST00000514271 FAM182BQ5T319 152 aa8.97□□□□□ -0.97
CLIP1-205ENST00000514271 CCDC30Q5VVM6 783 aa8.97□□□□□ -0.97
CLIP1-205ENST00000514271 CLEC4GQ6UXB4 293 aa8.97□□□□□ -0.97
CLIP1-205ENST00000514271 PROM2Q8N271 834 aa8.97□□□□□ -0.97
CLIP1-205ENST00000514271 HYPKQ9NX55 129 aa8.97□□□□□ -0.97
CLIP1-205ENST00000514271 CCDC171Q6TFL3 1326 aa8.97□□□□□ -0.97
CLIP1-205ENST00000514271 KIAA1524Q8TCG1 905 aa8.97□□□□□ -0.97
CLIP1-205ENST00000514271 ZNF496Q96IT1 587 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-205ENST00000514271 MTFR1LQ9H019 292 aa8.97□□□□□ -0.97
CLIP1-205ENST00000514271 SMC4Q9NTJ3 1288 aa8.97□□□□□ -0.97
CLIP1-205ENST00000514271 MYO5AQ9Y4I1 1855 aaKnown RBP8.97□□□□□ -0.97
CLIP1-205ENST00000514271 COL15A1P39059 1388 aa8.96□□□□□ -0.97
CLIP1-205ENST00000514271 CHRM1P11229 460 aaPredicted RBP8.96□□□□□ -0.97
CLIP1-205ENST00000514271 CSPP1Q1MSJ5 1256 aa8.96□□□□□ -0.97
CLIP1-205ENST00000514271 TRAPPC3LQ5T215 181 aa8.96□□□□□ -0.97
CLIP1-205ENST00000514271 NLGN1Q8N2Q7 840 aa8.96□□□□□ -0.97
CLIP1-205ENST00000514271 MYH7P12883 1935 aa8.96□□□□□ -0.98
CLIP1-205ENST00000514271 CRKLP46109 303 aaKnown RBP8.96□□□□□ -0.98
CLIP1-205ENST00000514271 DEFB132Q7Z7B7 95 aa8.96□□□□□ -0.98
CLIP1-205ENST00000514271 LINC00116Q8NCU8 138 aa8.96□□□□□ -0.98
CLIP1-205ENST00000514271 OTUD7AQ8TE49 926 aaPredicted RBP8.96□□□□□ -0.98
CLIP1-205ENST00000514271 GTPBP4Q9BZE4 634 aaKnown RBP8.96□□□□□ -0.98
CLIP1-205ENST00000514271 DBF4Q9UBU7 674 aaPredicted RBP8.96□□□□□ -0.98
CLIP1-205ENST00000514271 MYH14Q7Z406 1995 aaKnown RBP8.96□□□□□ -0.98
CLIP1-205ENST00000514271 CAPN15O75808 1086 aa8.96□□□□□ -0.98
CLIP1-205ENST00000514271 C8orf58Q8NAV2 365 aa8.96□□□□□ -0.98
CLIP1-205ENST00000514271 DLEC1Q9Y238 1755 aa8.96□□□□□ -0.98
CLIP1-205ENST00000514271 RAD50Q92878 1312 aa8.95□□□□□ -0.98
CLIP1-205ENST00000514271 LAMB2P55268 1798 aa8.95□□□□□ -0.98
CLIP1-205ENST00000514271 TULP2O00295 520 aa8.95□□□□□ -0.98
CLIP1-205ENST00000514271 EIF5P55010 431 aaKnown RBP8.95□□□□□ -0.98
CLIP1-205ENST00000514271 ITPK1Q13572 414 aa8.95□□□□□ -0.98
CLIP1-205ENST00000514271 LNPKQ9C0E8 428 aa8.95□□□□□ -0.98
CLIP1-205ENST00000514271 DDX21Q9NR30 783 aaKnown RBP eCLIP8.95□□□□□ -0.98
CLIP1-205ENST00000514271 NARFQ9UHQ1 456 aa8.95□□□□□ -0.98
CLIP1-205ENST00000514271 PTPRCP08575 1304 aa8.95□□□□□ -0.98
CLIP1-205ENST00000514271 NEDD4P46934 1319 aa8.95□□□□□ -0.98
CLIP1-205ENST00000514271 UQCRHLA0A096LP55 91 aa8.95□□□□□ -0.98
CLIP1-205ENST00000514271 DDX58O95786 925 aaKnown RBP8.95□□□□□ -0.98
CLIP1-205ENST00000514271 UQCRHP07919 91 aa8.95□□□□□ -0.98
CLIP1-205ENST00000514271 ALDH8A1Q9H2A2 487 aaPredicted RBP8.95□□□□□ -0.98
CLIP1-205ENST00000514271 LRRC4BQ9NT99 713 aa8.95□□□□□ -0.98
CLIP1-205ENST00000514271 DOCK2Q92608 1830 aa8.95□□□□□ -0.98
CLIP1-205ENST00000514271 KIF20AO95235 890 aa8.95□□□□□ -0.98
CLIP1-205ENST00000514271 POLD1P28340 1107 aa8.95□□□□□ -0.98
CLIP1-205ENST00000514271 CC2D2BQ6DHV5 1058 aa8.95□□□□□ -0.98
CLIP1-205ENST00000514271 TEX2Q8IWB9 1127 aa8.95□□□□□ -0.98
CLIP1-205ENST00000514271 DNAJC10Q8IXB1 793 aa8.95□□□□□ -0.98
CLIP1-205ENST00000514271 STK31Q9BXU1 1019 aa8.95□□□□□ -0.98
CLIP1-205ENST00000514271 TFCP2L1Q9NZI6 479 aa8.95□□□□□ -0.98
CLIP1-205ENST00000514271 CCDC39Q9UFE4 941 aa8.95□□□□□ -0.98
CLIP1-205ENST00000514271 USP25Q9UHP3 1055 aa8.95□□□□□ -0.98
CLIP1-205ENST00000514271 A0A1B0GUL6 1792 aa8.94□□□□□ -0.98
CLIP1-205ENST00000514271 INTS5Q6P9B9 1019 aaKnown RBP8.94□□□□□ -0.98
CLIP1-205ENST00000514271 KIF6Q6ZMV9 814 aa8.94□□□□□ -0.98
CLIP1-205ENST00000514271 RBM27Q9P2N5 1060 aaKnown RBP8.94□□□□□ -0.98
CLIP1-205ENST00000514271 AFDNP55196 1824 aaKnown RBP8.94□□□□□ -0.98
CLIP1-205ENST00000514271 PNPLA7Q6ZV29 1317 aa8.94□□□□□ -0.98
CLIP1-205ENST00000514271 IPO8O15397 1037 aaKnown RBP8.94□□□□□ -0.98
CLIP1-205ENST00000514271 JARID2Q92833 1246 aaPredicted RBP8.94□□□□□ -0.98
CLIP1-205ENST00000514271 DCTN1Q14203 1278 aa8.93□□□□□ -0.98
CLIP1-205ENST00000514271 RPAP2Q8IXW5 612 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms