RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 LRRFIP2Q9Y608 721 aaKnown RBP14.27□□□□□ -0.13
HTT-213ENST00000513806 RIC1Q4ADV7 1423 aa14.26□□□□□ -0.13
HTT-213ENST00000513806 GOLGB1Q14789 3259 aaKnown RBP14.26□□□□□ -0.13
HTT-213ENST00000513806 H0YIN7 160 aa14.26□□□□□ -0.13
HTT-213ENST00000513806 ZBTB7BO15156 539 aaPredicted RBP14.26□□□□□ -0.13
HTT-213ENST00000513806 UBTFL1P0CB47 393 aaPredicted RBP14.26□□□□□ -0.13
HTT-213ENST00000513806 CTSWP56202 376 aa14.26□□□□□ -0.13
HTT-213ENST00000513806 GREM2Q9H772 168 aa14.26□□□□□ -0.13
HTT-213ENST00000513806 CHMP3Q9Y3E7 222 aa14.26□□□□□ -0.13
HTT-213ENST00000513806 KLRG2A4D1S0 409 aaPredicted RBP14.25□□□□□ -0.13
HTT-213ENST00000513806 SRGNP10124 158 aa14.25□□□□□ -0.13
HTT-213ENST00000513806 PDE3AQ14432 1141 aa14.25□□□□□ -0.13
HTT-213ENST00000513806 FAM161AQ3B820 660 aa14.25□□□□□ -0.13
HTT-213ENST00000513806 LMBR1LQ6UX01 489 aa14.25□□□□□ -0.13
HTT-213ENST00000513806 OLFM4Q6UX06 510 aa14.25□□□□□ -0.13
HTT-213ENST00000513806 PELP1Q8IZL8 1130 aaKnown RBP14.25□□□□□ -0.13
HTT-213ENST00000513806 ANKRD44Q8N8A2 993 aa14.25□□□□□ -0.13
HTT-213ENST00000513806 TTLL11Q8NHH1 800 aa14.25□□□□□ -0.13
HTT-213ENST00000513806 RPGRQ92834 1020 aaKnown RBP14.25□□□□□ -0.13
HTT-213ENST00000513806 ARFGEF1Q9Y6D6 1849 aa14.25□□□□□ -0.13
HTT-213ENST00000513806 CENPBP07199 599 aaPredicted RBP14.24□□□□□ -0.13
HTT-213ENST00000513806 MS4A1P11836 297 aa14.24□□□□□ -0.13
HTT-213ENST00000513806 TGFB2P61812 414 aa14.24□□□□□ -0.13
HTT-213ENST00000513806 CRY2Q49AN0 593 aa14.24□□□□□ -0.13
HTT-213ENST00000513806 PLA2G12BQ9BX93 195 aa14.24□□□□□ -0.13
HTT-213ENST00000513806 A0A1B0GUL6 1792 aa14.24□□□□□ -0.13
HTT-213ENST00000513806 CCDC88AQ3V6T2 1871 aa14.23□□□□□ -0.13
HTT-213ENST00000513806 SF3B3Q15393 1217 aaKnown RBP14.23□□□□□ -0.13
HTT-213ENST00000513806 EXOC6Q8TAG9 804 aa14.23□□□□□ -0.13
HTT-213ENST00000513806 CELF1Q92879 486 aaKnown RBP14.23□□□□□ -0.13
HTT-213ENST00000513806 MASTLQ96GX5 879 aa14.23□□□□□ -0.13
HTT-213ENST00000513806 ZNF594Q96JF6 807 aaPredicted RBP14.23□□□□□ -0.13
HTT-213ENST00000513806 GNAI3P08754 354 aa14.22□□□□□ -0.13
HTT-213ENST00000513806 NPR1P16066 1061 aa14.22□□□□□ -0.13
HTT-213ENST00000513806 KLHDC4Q8TBB5 520 aa14.22□□□□□ -0.13
HTT-213ENST00000513806 BCS1LQ9Y276 419 aa14.22□□□□□ -0.13
HTT-213ENST00000513806 GNAI2P04899 355 aa14.21□□□□□ -0.13
HTT-213ENST00000513806 CSF1RP07333 972 aa14.21□□□□□ -0.13
HTT-213ENST00000513806 ITGA6P23229 1130 aa14.21□□□□□ -0.13
HTT-213ENST00000513806 CCDC152Q4G0S7 254 aa14.21□□□□□ -0.13
HTT-213ENST00000513806 STYK1Q6J9G0 422 aa14.21□□□□□ -0.13
HTT-213ENST00000513806 PRPF40BQ6NWY9 871 aaKnown RBP14.21□□□□□ -0.13
HTT-213ENST00000513806 DDX46Q7L014 1031 aaKnown RBP14.21□□□□□ -0.13
HTT-213ENST00000513806 RBM17Q96I25 401 aaKnown RBP14.21□□□□□ -0.13
HTT-213ENST00000513806 PIM2Q9P1W9 311 aa14.21□□□□□ -0.13
HTT-213ENST00000513806 DDX19BQ9UMR2 479 aa14.21□□□□□ -0.13
HTT-213ENST00000513806 YBX3P16989 372 aaKnown RBP eCLIP14.2□□□□□ -0.14
HTT-213ENST00000513806 HOXA10P31260 410 aaPredicted RBP14.2□□□□□ -0.14
HTT-213ENST00000513806 ZBTB40Q9NUA8 1239 aa14.2□□□□□ -0.14
HTT-213ENST00000513806 LRRC37AA6NMS7 1700 aa14.2□□□□□ -0.14
HTT-213ENST00000513806 PNMA6EA0A0J9YXQ4 647 aa14.19□□□□□ -0.14
HTT-213ENST00000513806 PPEF1O14829 653 aaPredicted RBP14.19□□□□□ -0.14
HTT-213ENST00000513806 C21orf2O43822 256 aa14.19□□□□□ -0.14
HTT-213ENST00000513806 GRAPQ13588 217 aa14.19□□□□□ -0.14
HTT-213ENST00000513806 RABL6Q3YEC7 729 aaPredicted RBP14.19□□□□□ -0.14
HTT-213ENST00000513806 DALRD3Q5D0E6 543 aaKnown RBP14.19□□□□□ -0.14
HTT-213ENST00000513806 TTLL6Q8N841 843 aa14.19□□□□□ -0.14
HTT-213ENST00000513806 GRAPLQ8TC17 118 aaPredicted RBP14.19□□□□□ -0.14
HTT-213ENST00000513806 PA2G4Q9UQ80 394 aaKnown RBP14.19□□□□□ -0.14
HTT-213ENST00000513806 FER1L6Q2WGJ9 1857 aa14.18□□□□□ -0.14
HTT-213ENST00000513806 CNKSR1Q969H4 720 aa14.18□□□□□ -0.14
HTT-213ENST00000513806 CRAMP1Q96RY5 1269 aa14.18□□□□□ -0.14
HTT-213ENST00000513806 PUS3Q9BZE2 481 aaKnown RBP14.18□□□□□ -0.14
HTT-213ENST00000513806 ANKRD18BA2A2Z9 1011 aa14.17□□□□□ -0.14
HTT-213ENST00000513806 HSP90B1P14625 803 aaKnown RBP14.17□□□□□ -0.14
HTT-213ENST00000513806 RFX5P48382 616 aaPredicted RBP14.17□□□□□ -0.14
HTT-213ENST00000513806 IFIT5Q13325 482 aaKnown RBP14.17□□□□□ -0.14
HTT-213ENST00000513806 CEP85Q6P2H3 762 aa14.17□□□□□ -0.14
HTT-213ENST00000513806 SIL1Q9H173 461 aa14.17□□□□□ -0.14
HTT-213ENST00000513806 RTL9Q8NET4 1388 aa14.17□□□□□ -0.14
HTT-213ENST00000513806 SBF1O95248 1867 aa14.16□□□□□ -0.14
HTT-213ENST00000513806 WTIPA6NIX2 430 aaPredicted RBP14.16□□□□□ -0.14
HTT-213ENST00000513806 SRGAP3O43295 1099 aa14.16□□□□□ -0.14
HTT-213ENST00000513806 ALDH1B1P30837 517 aa14.16□□□□□ -0.14
HTT-213ENST00000513806 RPS8P62241 208 aaKnown RBP14.16□□□□□ -0.14
HTT-213ENST00000513806 GPR162Q16538 588 aa14.16□□□□□ -0.14
HTT-213ENST00000513806 CCDC57Q2TAC2 916 aa14.16□□□□□ -0.14
HTT-213ENST00000513806 LRRC24Q50LG9 513 aa14.16□□□□□ -0.14
HTT-213ENST00000513806 TAF7LQ5H9L4 462 aa14.16□□□□□ -0.14
HTT-213ENST00000513806 ANKRD18AQ8IVF6 992 aa14.16□□□□□ -0.14
HTT-213ENST00000513806 SIRT2Q8IXJ6 389 aa14.16□□□□□ -0.14
HTT-213ENST00000513806 PDZRN3Q9UPQ7 1066 aa14.16□□□□□ -0.14
HTT-213ENST00000513806 PCDHB15Q9Y5E8 787 aa14.16□□□□□ -0.14
HTT-213ENST00000513806 LTBP1Q14766 1721 aa14.15□□□□□ -0.14
HTT-213ENST00000513806 ATP8B2P98198 1209 aa14.15□□□□□ -0.14
HTT-213ENST00000513806 C7orf43Q8WVR3 580 aa14.15□□□□□ -0.14
HTT-213ENST00000513806 GPR101Q96P66 508 aaPredicted RBP14.15□□□□□ -0.14
HTT-213ENST00000513806 UTRNP46939 3433 aa14.14□□□□□ -0.15
HTT-213ENST00000513806 SNAP23O00161 211 aa14.14□□□□□ -0.15
HTT-213ENST00000513806 IGHMBP2P38935 993 aaKnown RBP14.14□□□□□ -0.15
HTT-213ENST00000513806 RASSF7Q02833 373 aa14.14□□□□□ -0.15
HTT-213ENST00000513806 PTPN12Q05209 780 aaKnown RBP14.14□□□□□ -0.15
HTT-213ENST00000513806 HELBQ8NG08 1087 aaPredicted RBP14.14□□□□□ -0.15
HTT-213ENST00000513806 CDC5LQ99459 802 aaKnown RBP14.14□□□□□ -0.15
HTT-213ENST00000513806 DUOX1Q9NRD9 1551 aa14.13□□□□□ -0.15
HTT-213ENST00000513806 GPSM2P81274 684 aa14.13□□□□□ -0.15
HTT-213ENST00000513806 MPHOSPH8Q99549 860 aa14.13□□□□□ -0.15
HTT-213ENST00000513806 CNNM1Q9NRU3 951 aa14.13□□□□□ -0.15
HTT-213ENST00000513806 ATP6V0A2Q9Y487 856 aa14.13□□□□□ -0.15
HTT-213ENST00000513806 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms