RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 TTLL7Q6ZT98 887 aa16.03■□□□□ 0.16
PTPN20-229ENST00000513756 SLC51AQ86UW1 340 aa16.03■□□□□ 0.16
PTPN20-229ENST00000513756 SP8Q8IXZ3 490 aa16.03■□□□□ 0.16
PTPN20-229ENST00000513756 MPNDQ8N594 471 aa16.03■□□□□ 0.16
PTPN20-229ENST00000513756 PNISRQ8TF01 805 aaKnown RBP16.03■□□□□ 0.16
PTPN20-229ENST00000513756 ZBTB3Q9H5J0 574 aa16.03■□□□□ 0.16
PTPN20-229ENST00000513756 CNGB1Q14028 1251 aaPredicted RBP16.02■□□□□ 0.16
PTPN20-229ENST00000513756 GIGYF2Q6Y7W6 1299 aaKnown RBP16.02■□□□□ 0.16
PTPN20-229ENST00000513756 GBA2Q9HCG7 927 aaPredicted RBP16.02■□□□□ 0.16
PTPN20-229ENST00000513756 ABCC4O15439 1325 aa16.01■□□□□ 0.15
PTPN20-229ENST00000513756 FAM155AB1AL88 458 aaPredicted RBP16.01■□□□□ 0.15
PTPN20-229ENST00000513756 TRPA1O75762 1119 aa16.01■□□□□ 0.15
PTPN20-229ENST00000513756 U2AF1L5P0DN76 240 aaPredicted RBP16.01■□□□□ 0.15
PTPN20-229ENST00000513756 MYL6BP14649 208 aa16.01■□□□□ 0.15
PTPN20-229ENST00000513756 ZNF157P51786 506 aaPredicted RBP16.01■□□□□ 0.15
PTPN20-229ENST00000513756 U2AF1Q01081 240 aaKnown RBP eCLIP16.01■□□□□ 0.15
PTPN20-229ENST00000513756 KIF23Q02241 960 aaPredicted RBP16.01■□□□□ 0.15
PTPN20-229ENST00000513756 SLC10A5Q5PT55 438 aa16.01■□□□□ 0.15
PTPN20-229ENST00000513756 C3orf67Q6ZVT6 689 aa16.01■□□□□ 0.15
PTPN20-229ENST00000513756 KRT26Q7Z3Y9 468 aa16.01■□□□□ 0.15
PTPN20-229ENST00000513756 CTU1Q7Z7A3 348 aaKnown RBP16.01■□□□□ 0.15
PTPN20-229ENST00000513756 MICALL2Q8IY33 904 aa16.01■□□□□ 0.15
PTPN20-229ENST00000513756 RNF186Q9NXI6 227 aa16.01■□□□□ 0.15
PTPN20-229ENST00000513756 MIS18AQ9NYP9 233 aa16.01■□□□□ 0.15
PTPN20-229ENST00000513756 REM2Q8IYK8 340 aaPredicted RBP16■□□□□ 0.15
PTPN20-229ENST00000513756 DPF2Q92785 391 aa16■□□□□ 0.15
PTPN20-229ENST00000513756 UTP14AQ9BVJ6 771 aaKnown RBP16■□□□□ 0.15
PTPN20-229ENST00000513756 AKAP11Q9UKA4 1901 aa16■□□□□ 0.15
PTPN20-229ENST00000513756 DCPSQ96C86 337 aaKnown RBP15.99■□□□□ 0.15
PTPN20-229ENST00000513756 PCGF6Q9BYE7 350 aa15.99■□□□□ 0.15
PTPN20-229ENST00000513756 PKN2Q16513 984 aaKnown RBP15.98■□□□□ 0.15
PTPN20-229ENST00000513756 DDX46Q7L014 1031 aaKnown RBP15.98■□□□□ 0.15
PTPN20-229ENST00000513756 ERBB4Q15303 1308 aa15.97■□□□□ 0.15
PTPN20-229ENST00000513756 SHTN1A0MZ66 631 aa15.97■□□□□ 0.15
PTPN20-229ENST00000513756 YDJCA8MPS7 323 aa15.97■□□□□ 0.15
PTPN20-229ENST00000513756 EIF4A1P60842 406 aaKnown RBP15.97■□□□□ 0.15
PTPN20-229ENST00000513756 SAMD7Q7Z3H4 446 aa15.97■□□□□ 0.15
PTPN20-229ENST00000513756 TMC4Q7Z404 712 aa15.97■□□□□ 0.15
PTPN20-229ENST00000513756 NEFMP07197 916 aa15.96■□□□□ 0.15
PTPN20-229ENST00000513756 SLC10A3P09131 477 aa15.96■□□□□ 0.15
PTPN20-229ENST00000513756 RPS12P25398 132 aaKnown RBP15.96■□□□□ 0.15
PTPN20-229ENST00000513756 GRAPQ13588 217 aa15.96■□□□□ 0.15
PTPN20-229ENST00000513756 TBC1D10BQ4KMP7 808 aaPredicted RBP15.96■□□□□ 0.15
PTPN20-229ENST00000513756 GRAPLQ8TC17 118 aaPredicted RBP15.96■□□□□ 0.15
PTPN20-229ENST00000513756 GCC1Q96CN9 775 aa15.96■□□□□ 0.15
PTPN20-229ENST00000513756 CSRNP1Q96S65 589 aa15.96■□□□□ 0.15
PTPN20-229ENST00000513756 ZBTB12Q9Y330 459 aaPredicted RBP15.96■□□□□ 0.15
PTPN20-229ENST00000513756 PSMD14O00487 310 aa15.95■□□□□ 0.14
PTPN20-229ENST00000513756 DLK2Q6UY11 383 aa15.95■□□□□ 0.14
PTPN20-229ENST00000513756 HPS5Q9UPZ3 1129 aa15.95■□□□□ 0.14
PTPN20-229ENST00000513756 ADM5C9JUS6 153 aa15.94■□□□□ 0.14
PTPN20-229ENST00000513756 WASHC4Q2M389 1173 aa15.94■□□□□ 0.14
PTPN20-229ENST00000513756 SULF1Q8IWU6 871 aa15.94■□□□□ 0.14
PTPN20-229ENST00000513756 POLR2AP24928 1970 aaKnown RBP15.94■□□□□ 0.14
PTPN20-229ENST00000513756 ANKRD36CQ5JPF3 1778 aa15.93■□□□□ 0.14
PTPN20-229ENST00000513756 KDM3BQ7LBC6 1761 aa15.93■□□□□ 0.14
PTPN20-229ENST00000513756 HCLS1P14317 486 aaPredicted RBP15.93■□□□□ 0.14
PTPN20-229ENST00000513756 HSP90AB3PQ58FF7 597 aa15.93■□□□□ 0.14
PTPN20-229ENST00000513756 RBM26Q5T8P6 1007 aaKnown RBP15.93■□□□□ 0.14
PTPN20-229ENST00000513756 HDAC9Q9UKV0 1011 aa15.93■□□□□ 0.14
PTPN20-229ENST00000513756 EGFRP00533 1210 aa15.91■□□□□ 0.14
PTPN20-229ENST00000513756 KIF4BQ2VIQ3 1234 aa15.91■□□□□ 0.14
PTPN20-229ENST00000513756 EYA3Q99504 573 aa15.91■□□□□ 0.14
PTPN20-229ENST00000513756 DBNDD1Q9H9R9 158 aa15.91■□□□□ 0.14
PTPN20-229ENST00000513756 TRMT112Q9UI30 125 aaKnown RBP15.91■□□□□ 0.14
PTPN20-229ENST00000513756 FKBP1BP68106 108 aa15.9■□□□□ 0.14
PTPN20-229ENST00000513756 NLRP10Q86W26 655 aa15.9■□□□□ 0.14
PTPN20-229ENST00000513756 RASAL3Q86YV0 1011 aa15.9■□□□□ 0.14
PTPN20-229ENST00000513756 SH3TC1Q8TE82 1336 aa15.9■□□□□ 0.14
PTPN20-229ENST00000513756 LAMB2P55268 1798 aa15.9■□□□□ 0.14
PTPN20-229ENST00000513756 C6orf229H3BNL8 230 aa15.89■□□□□ 0.13
PTPN20-229ENST00000513756 ECE2O60344 883 aa15.89■□□□□ 0.13
PTPN20-229ENST00000513756 CDCA5Q96FF9 252 aa15.89■□□□□ 0.13
PTPN20-229ENST00000513756 THUMPD2Q9BTF0 503 aaKnown RBP15.89■□□□□ 0.13
PTPN20-229ENST00000513756 GGA3Q9NZ52 723 aa15.89■□□□□ 0.13
PTPN20-229ENST00000513756 NSFL1CQ9UNZ2 370 aaKnown RBP15.89■□□□□ 0.13
PTPN20-229ENST00000513756 DUOX1Q9NRD9 1551 aa15.88■□□□□ 0.13
PTPN20-229ENST00000513756 RIMBP2O15034 1052 aa15.88■□□□□ 0.13
PTPN20-229ENST00000513756 EIF2S2P20042 333 aaKnown RBP15.88■□□□□ 0.13
PTPN20-229ENST00000513756 PPP2R1AP30153 589 aa15.88■□□□□ 0.13
PTPN20-229ENST00000513756 LRP10Q7Z4F1 713 aa15.88■□□□□ 0.13
PTPN20-229ENST00000513756 TCIRG1Q13488 830 aa15.87■□□□□ 0.13
PTPN20-229ENST00000513756 PDIA6Q15084 440 aa15.87■□□□□ 0.13
PTPN20-229ENST00000513756 ZNF296Q8WUU4 475 aaPredicted RBP15.87■□□□□ 0.13
PTPN20-229ENST00000513756 LRRC37AA6NMS7 1700 aa15.86■□□□□ 0.13
PTPN20-229ENST00000513756 G3V3G9 751 aa15.86■□□□□ 0.13
PTPN20-229ENST00000513756 VIL1P09327 827 aaKnown RBP15.86■□□□□ 0.13
PTPN20-229ENST00000513756 DOK7Q18PE1 504 aa15.86■□□□□ 0.13
PTPN20-229ENST00000513756 NOM1Q5C9Z4 860 aaKnown RBP15.86■□□□□ 0.13
PTPN20-229ENST00000513756 DCAF8Q5TAQ9 597 aa15.86■□□□□ 0.13
PTPN20-229ENST00000513756 FBXO46Q6PJ61 603 aaPredicted RBP15.86■□□□□ 0.13
PTPN20-229ENST00000513756 POLLQ9UGP5 575 aa15.86■□□□□ 0.13
PTPN20-229ENST00000513756 TSPYL4Q9UJ04 414 aa15.86■□□□□ 0.13
PTPN20-229ENST00000513756 RTL9Q8NET4 1388 aa15.86■□□□□ 0.13
PTPN20-229ENST00000513756 DLG5Q8TDM6 1919 aa15.86■□□□□ 0.13
PTPN20-229ENST00000513756 DDX60Q8IY21 1712 aaKnown RBP15.85■□□□□ 0.13
PTPN20-229ENST00000513756 TBC1D8O95759 1140 aa15.85■□□□□ 0.13
PTPN20-229ENST00000513756 AIMP1Q12904 312 aaKnown RBP15.85■□□□□ 0.13
PTPN20-229ENST00000513756 SCARF1Q14162 830 aa15.85■□□□□ 0.13
PTPN20-229ENST00000513756 NFE2L2Q16236 605 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms