RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 RGL2O15211 777 aa16.21■□□□□ 0.19
SFXN1-210ENST00000513725 CDCA8Q53HL2 280 aa16.21■□□□□ 0.19
SFXN1-210ENST00000513725 CRAMP1Q96RY5 1269 aa16.21■□□□□ 0.19
SFXN1-210ENST00000513725 RBM26Q5T8P6 1007 aaKnown RBP16.2■□□□□ 0.18
SFXN1-210ENST00000513725 ANKRD13DQ6ZTN6 518 aa16.2■□□□□ 0.18
SFXN1-210ENST00000513725 NYXQ9GZU5 481 aa16.2■□□□□ 0.18
SFXN1-210ENST00000513725 R3HDMLQ9H3Y0 253 aa16.2■□□□□ 0.18
SFXN1-210ENST00000513725 PRAMEF22A3QJZ6 481 aa16.19■□□□□ 0.18
SFXN1-210ENST00000513725 KIAA2012Q0VF49 1180 aa16.19■□□□□ 0.18
SFXN1-210ENST00000513725 ZNF790Q6PG37 636 aa16.19■□□□□ 0.18
SFXN1-210ENST00000513725 RTFDC1Q9BY42 306 aaPredicted RBP16.19■□□□□ 0.18
SFXN1-210ENST00000513725 PRDM6Q9NQX0 595 aa16.19■□□□□ 0.18
SFXN1-210ENST00000513725 ZBTB12Q9Y330 459 aaPredicted RBP16.19■□□□□ 0.18
SFXN1-210ENST00000513725 RIC1Q4ADV7 1423 aa16.19■□□□□ 0.18
SFXN1-210ENST00000513725 ALDH1A1P00352 501 aa16.18■□□□□ 0.18
SFXN1-210ENST00000513725 SLC51AQ86UW1 340 aa16.18■□□□□ 0.18
SFXN1-210ENST00000513725 DPF3Q92784 378 aa16.18■□□□□ 0.18
SFXN1-210ENST00000513725 FMNL2Q96PY5 1086 aa16.18■□□□□ 0.18
SFXN1-210ENST00000513725 ATP6V0A2Q9Y487 856 aa16.18■□□□□ 0.18
SFXN1-210ENST00000513725 ABCC12Q96J65 1359 aa16.17■□□□□ 0.18
SFXN1-210ENST00000513725 A0A1W2PPC1 479 aa16.17■□□□□ 0.18
SFXN1-210ENST00000513725 EGFRP00533 1210 aa16.17■□□□□ 0.18
SFXN1-210ENST00000513725 SLC4A8Q2Y0W8 1093 aa16.17■□□□□ 0.18
SFXN1-210ENST00000513725 DPP8Q6V1X1 898 aaPredicted RBP16.17■□□□□ 0.18
SFXN1-210ENST00000513725 ERO1AQ96HE7 468 aa16.17■□□□□ 0.18
SFXN1-210ENST00000513725 PRO3102Q9H379 93 aa16.17■□□□□ 0.18
SFXN1-210ENST00000513725 GGA3Q9NZ52 723 aa16.17■□□□□ 0.18
SFXN1-210ENST00000513725 NBPF11Q86T75 865 aa16.16■□□□□ 0.18
SFXN1-210ENST00000513725 NUTM1Q86Y26 1132 aa16.16■□□□□ 0.18
SFXN1-210ENST00000513725 ZNF333Q96JL9 665 aa16.16■□□□□ 0.18
SFXN1-210ENST00000513725 STXBP5LQ9Y2K9 1186 aa16.16■□□□□ 0.18
SFXN1-210ENST00000513725 YDJCA8MPS7 323 aa16.15■□□□□ 0.18
SFXN1-210ENST00000513725 RPS12P25398 132 aaKnown RBP16.15■□□□□ 0.18
SFXN1-210ENST00000513725 PIP4K2AP48426 406 aaPredicted RBP16.15■□□□□ 0.18
SFXN1-210ENST00000513725 MKRN3Q13064 507 aaKnown RBP16.15■□□□□ 0.18
SFXN1-210ENST00000513725 KIF4BQ2VIQ3 1234 aa16.15■□□□□ 0.18
SFXN1-210ENST00000513725 LRCH3Q96II8 777 aa16.15■□□□□ 0.18
SFXN1-210ENST00000513725 LAMA3Q16787 3333 aa16.15■□□□□ 0.18
SFXN1-210ENST00000513725 UBE2Q2LH0YL09 131 aa16.14■□□□□ 0.17
SFXN1-210ENST00000513725 SOX1O00570 391 aaPredicted RBP16.14■□□□□ 0.17
SFXN1-210ENST00000513725 MPNDQ8N594 471 aa16.14■□□□□ 0.17
SFXN1-210ENST00000513725 EFCC1Q9HA90 598 aa16.14■□□□□ 0.17
SFXN1-210ENST00000513725 PSMD14O00487 310 aa16.13■□□□□ 0.17
SFXN1-210ENST00000513725 TEFQ10587 303 aa16.13■□□□□ 0.17
SFXN1-210ENST00000513725 MOB2Q70IA6 237 aa16.13■□□□□ 0.17
SFXN1-210ENST00000513725 GPR153Q6NV75 609 aa16.12■□□□□ 0.17
SFXN1-210ENST00000513725 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.12■□□□□ 0.17
SFXN1-210ENST00000513725 TCIRG1Q13488 830 aa16.11■□□□□ 0.17
SFXN1-210ENST00000513725 TTLL12Q14166 644 aaPredicted RBP16.11■□□□□ 0.17
SFXN1-210ENST00000513725 HLFQ16534 295 aa16.11■□□□□ 0.17
SFXN1-210ENST00000513725 SLC9C1Q4G0N8 1177 aa16.11■□□□□ 0.17
SFXN1-210ENST00000513725 DEFB123Q8N688 67 aa16.11■□□□□ 0.17
SFXN1-210ENST00000513725 CD99L2Q8TCZ2 262 aa16.11■□□□□ 0.17
SFXN1-210ENST00000513725 ZNF609O15014 1411 aa16.11■□□□□ 0.17
SFXN1-210ENST00000513725 VCANP13611 3396 aa16.1■□□□□ 0.17
SFXN1-210ENST00000513725 MTHFSDQ2M296 383 aaKnown RBP16.1■□□□□ 0.17
SFXN1-210ENST00000513725 ANGEL2Q5VTE6 544 aaKnown RBP16.1■□□□□ 0.17
SFXN1-210ENST00000513725 USP16Q9Y5T5 823 aa16.1■□□□□ 0.17
SFXN1-210ENST00000513725 NR2E3Q9Y5X4 410 aa16.1■□□□□ 0.17
SFXN1-210ENST00000513725 INHBEP58166 350 aa16.09■□□□□ 0.17
SFXN1-210ENST00000513725 SP8Q8IXZ3 490 aa16.09■□□□□ 0.17
SFXN1-210ENST00000513725 ASTN2O75129 1339 aaPredicted RBP16.09■□□□□ 0.17
SFXN1-210ENST00000513725 COL9A1P20849 921 aa16.08■□□□□ 0.16
SFXN1-210ENST00000513725 IL13P35225 146 aa16.08■□□□□ 0.16
SFXN1-210ENST00000513725 HTATIP2Q9BUP3 242 aa16.08■□□□□ 0.16
SFXN1-210ENST00000513725 WTIPA6NIX2 430 aaPredicted RBP16.07■□□□□ 0.16
SFXN1-210ENST00000513725 BBOX1O75936 387 aa16.07■□□□□ 0.16
SFXN1-210ENST00000513725 IFNL1Q8IU54 200 aa16.07■□□□□ 0.16
SFXN1-210ENST00000513725 NLRP3Q96P20 1036 aa16.07■□□□□ 0.16
SFXN1-210ENST00000513725 IBTKQ9P2D0 1353 aaPredicted RBP16.06■□□□□ 0.16
SFXN1-210ENST00000513725 MANSC4A6NHS7 340 aaPredicted RBP16.06■□□□□ 0.16
SFXN1-210ENST00000513725 SCARF1Q14162 830 aa16.06■□□□□ 0.16
SFXN1-210ENST00000513725 ABCC4O15439 1325 aa16.05■□□□□ 0.16
SFXN1-210ENST00000513725 ERBB4Q15303 1308 aa16.05■□□□□ 0.16
SFXN1-210ENST00000513725 MYCP01106 439 aaPredicted RBP16.05■□□□□ 0.16
SFXN1-210ENST00000513725 NF2P35240 595 aa16.05■□□□□ 0.16
SFXN1-210ENST00000513725 ARHGEF6Q15052 776 aa16.05■□□□□ 0.16
SFXN1-210ENST00000513725 DBNDD1Q9H9R9 158 aa16.05■□□□□ 0.16
SFXN1-210ENST00000513725 SPTBN5Q9NRC6 3674 aaKnown RBP16.04■□□□□ 0.16
SFXN1-210ENST00000513725 SP3Q02447 781 aa16.04■□□□□ 0.16
SFXN1-210ENST00000513725 WASHC4Q2M389 1173 aa16.04■□□□□ 0.16
SFXN1-210ENST00000513725 SPRYD7Q5W111 196 aa16.04■□□□□ 0.16
SFXN1-210ENST00000513725 C3orf67Q6ZVT6 689 aa16.04■□□□□ 0.16
SFXN1-210ENST00000513725 KDM3BQ7LBC6 1761 aa16.03■□□□□ 0.16
SFXN1-210ENST00000513725 NBPF26B4DH59 902 aa16.03■□□□□ 0.16
SFXN1-210ENST00000513725 ZBTB7BO15156 539 aaPredicted RBP16.03■□□□□ 0.16
SFXN1-210ENST00000513725 HMOX1P09601 288 aa16.03■□□□□ 0.16
SFXN1-210ENST00000513725 SNRPA1P09661 255 aaKnown RBP16.03■□□□□ 0.16
SFXN1-210ENST00000513725 NBPF10Q6P3W6 841 aaKnown RBP16.03■□□□□ 0.16
SFXN1-210ENST00000513725 Q7L0L9 218 aa16.03■□□□□ 0.16
SFXN1-210ENST00000513725 PTCH2Q9Y6C5 1203 aa16.03■□□□□ 0.16
SFXN1-210ENST00000513725 BTBD11A6QL63 1104 aa16.02■□□□□ 0.16
SFXN1-210ENST00000513725 ERVV-1B6SEH8 477 aa16.02■□□□□ 0.16
SFXN1-210ENST00000513725 SUSD4Q5VX71 490 aa16.02■□□□□ 0.16
SFXN1-210ENST00000513725 IL17REQ8NFR9 667 aa16.02■□□□□ 0.16
SFXN1-210ENST00000513725 MTMR10Q9NXD2 777 aa16.02■□□□□ 0.16
SFXN1-210ENST00000513725 SIPA1L3O60292 1781 aaPredicted RBP16.02■□□□□ 0.15
SFXN1-210ENST00000513725 KCNQ3O43525 872 aa16.01■□□□□ 0.15
SFXN1-210ENST00000513725 GPTP24298 496 aa16.01■□□□□ 0.15
SFXN1-210ENST00000513725 PTPN12Q05209 780 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms