RNA–Protein interactions for RNA: ENST00000513060.5

RACK1-230, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5

Gene RACK1, Length 1,651 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-230ENST00000513060 FAM161AQ3B820 660 aa16.99■□□□□ 0.31
RACK1-230ENST00000513060 CCDC152Q4G0S7 254 aa16.99■□□□□ 0.31
RACK1-230ENST00000513060 GREM2Q9H772 168 aa16.99■□□□□ 0.31
RACK1-230ENST00000513060 SF3B3Q15393 1217 aaKnown RBP16.98■□□□□ 0.31
RACK1-230ENST00000513060 CCDC57Q2TAC2 916 aa16.98■□□□□ 0.31
RACK1-230ENST00000513060 IFIT5Q13325 482 aaKnown RBP16.97■□□□□ 0.31
RACK1-230ENST00000513060 KLHDC4Q8TBB5 520 aa16.97■□□□□ 0.31
RACK1-230ENST00000513060 BRIP1Q9BX63 1249 aa16.97■□□□□ 0.31
RACK1-230ENST00000513060 ITGA6P23229 1130 aa16.97■□□□□ 0.31
RACK1-230ENST00000513060 RFX5P48382 616 aaPredicted RBP16.97■□□□□ 0.31
RACK1-230ENST00000513060 CENPQQ7L2Z9 268 aaPredicted RBP16.97■□□□□ 0.31
RACK1-230ENST00000513060 DCTPP1Q9H773 170 aa16.97■□□□□ 0.31
RACK1-230ENST00000513060 PA2G4Q9UQ80 394 aaKnown RBP16.97■□□□□ 0.31
RACK1-230ENST00000513060 KDM2BQ8NHM5 1336 aa16.96■□□□□ 0.31
RACK1-230ENST00000513060 SOCS7O14512 581 aa16.96■□□□□ 0.31
RACK1-230ENST00000513060 SURF6O75683 361 aaKnown RBP16.96■□□□□ 0.31
RACK1-230ENST00000513060 POLD1P28340 1107 aa16.96■□□□□ 0.31
RACK1-230ENST00000513060 PTPN12Q05209 780 aaKnown RBP16.96■□□□□ 0.31
RACK1-230ENST00000513060 CASZ1Q86V15 1759 aa16.96■□□□□ 0.3
RACK1-230ENST00000513060 ANKRD18BA2A2Z9 1011 aa16.95■□□□□ 0.3
RACK1-230ENST00000513060 GCC1Q96CN9 775 aa16.95■□□□□ 0.3
RACK1-230ENST00000513060 ZNF594Q96JF6 807 aaPredicted RBP16.95■□□□□ 0.3
RACK1-230ENST00000513060 COPRSQ9NQ92 184 aa16.95■□□□□ 0.3
RACK1-230ENST00000513060 SEC31BQ9NQW1 1179 aa16.95■□□□□ 0.3
RACK1-230ENST00000513060 EXOC6BQ9Y2D4 811 aa16.95■□□□□ 0.3
RACK1-230ENST00000513060 DDX60Q8IY21 1712 aaKnown RBP16.95■□□□□ 0.3
RACK1-230ENST00000513060 TAF7LQ5H9L4 462 aa16.94■□□□□ 0.3
RACK1-230ENST00000513060 SMC5Q8IY18 1101 aa16.94■□□□□ 0.3
RACK1-230ENST00000513060 SIL1Q9H173 461 aa16.94■□□□□ 0.3
RACK1-230ENST00000513060 NOP58Q9Y2X3 529 aaKnown RBP16.94■□□□□ 0.3
RACK1-230ENST00000513060 RIC1Q4ADV7 1423 aa16.94■□□□□ 0.3
RACK1-230ENST00000513060 KLRG2A4D1S0 409 aaPredicted RBP16.94■□□□□ 0.3
RACK1-230ENST00000513060 RTL9Q8NET4 1388 aa16.93■□□□□ 0.3
RACK1-230ENST00000513060 NRXN2Q9P2S2 1712 aa16.93■□□□□ 0.3
RACK1-230ENST00000513060 APBB1O00213 710 aa16.93■□□□□ 0.3
RACK1-230ENST00000513060 PDE6BP35913 854 aa16.93■□□□□ 0.3
RACK1-230ENST00000513060 CRY2Q49AN0 593 aa16.93■□□□□ 0.3
RACK1-230ENST00000513060 DDX46Q7L014 1031 aaKnown RBP16.93■□□□□ 0.3
RACK1-230ENST00000513060 G3BP1Q13283 466 aaKnown RBP eCLIP16.92■□□□□ 0.39e-15■□□□□ 8.1
RACK1-230ENST00000513060 HSP90AB4PQ58FF6 505 aa16.92■□□□□ 0.3
RACK1-230ENST00000513060 RPGRQ92834 1020 aaKnown RBP16.92■□□□□ 0.3
RACK1-230ENST00000513060 SGIP1Q9BQI5 828 aa16.92■□□□□ 0.3
RACK1-230ENST00000513060 MYH3P11055 1940 aa16.91■□□□□ 0.3
RACK1-230ENST00000513060 PTGER2P43116 358 aa16.91■□□□□ 0.3
RACK1-230ENST00000513060 OS9Q13438 667 aaPredicted RBP16.91■□□□□ 0.3
RACK1-230ENST00000513060 CDC5LQ99459 802 aaKnown RBP16.91■□□□□ 0.3
RACK1-230ENST00000513060 LAMB2P55268 1798 aa16.91■□□□□ 0.3
RACK1-230ENST00000513060 ANKRD45Q5TZF3 282 aa16.91■□□□□ 0.3
RACK1-230ENST00000513060 LDHAL6AQ6ZMR3 332 aa16.91■□□□□ 0.3
RACK1-230ENST00000513060 PUS3Q9BZE2 481 aaKnown RBP16.91■□□□□ 0.3
RACK1-230ENST00000513060 TNRC6CQ9HCJ0 1690 aaKnown RBP16.9■□□□□ 0.3
RACK1-230ENST00000513060 EYA2O00167 538 aa16.9■□□□□ 0.3
RACK1-230ENST00000513060 RAB11FIP3O75154 756 aa16.9■□□□□ 0.3
RACK1-230ENST00000513060 SRGNP10124 158 aa16.9■□□□□ 0.3
RACK1-230ENST00000513060 IGHMBP2P38935 993 aaKnown RBP16.9■□□□□ 0.3
RACK1-230ENST00000513060 LRRC24Q50LG9 513 aa16.9■□□□□ 0.3
RACK1-230ENST00000513060 ANKRD18AQ8IVF6 992 aa16.9■□□□□ 0.3
RACK1-230ENST00000513060 CELF1Q92879 486 aaKnown RBP16.9■□□□□ 0.3
RACK1-230ENST00000513060 RBM17Q96I25 401 aaKnown RBP16.9■□□□□ 0.3
RACK1-230ENST00000513060 MPHOSPH8Q99549 860 aa16.9■□□□□ 0.3
RACK1-230ENST00000513060 SPON1Q9HCB6 807 aa16.9■□□□□ 0.3
RACK1-230ENST00000513060 CIAO1O76071 339 aa16.89■□□□□ 0.29
RACK1-230ENST00000513060 HOXA10P31260 410 aaPredicted RBP16.89■□□□□ 0.29
RACK1-230ENST00000513060 RPS8P62241 208 aaKnown RBP16.89■□□□□ 0.29
RACK1-230ENST00000513060 BCL11AQ9H165 835 aa16.89■□□□□ 0.29
RACK1-230ENST00000513060 CNNM1Q9NRU3 951 aa16.89■□□□□ 0.29
RACK1-230ENST00000513060 H0YIN7 160 aa16.88■□□□□ 0.29
RACK1-230ENST00000513060 NUCB1Q02818 461 aa16.88■□□□□ 0.29
RACK1-230ENST00000513060 ATG9AQ7Z3C6 839 aa16.88■□□□□ 0.29
RACK1-230ENST00000513060 C2CD5Q86YS7 1000 aa16.88■□□□□ 0.29
RACK1-230ENST00000513060 ERC1Q8IUD2 1116 aa16.88■□□□□ 0.29
RACK1-230ENST00000513060 RHPN1Q8TCX5 695 aa16.88■□□□□ 0.29
RACK1-230ENST00000513060 LRRCC1Q9C099 1032 aa16.88■□□□□ 0.29
RACK1-230ENST00000513060 FBXO3Q9UK99 471 aa16.88■□□□□ 0.29
RACK1-230ENST00000513060 C10orf71Q711Q0 1435 aa16.88■□□□□ 0.29
RACK1-230ENST00000513060 SMARCA5O60264 1052 aaPredicted RBP16.88■□□□□ 0.29
RACK1-230ENST00000513060 SASH1O94885 1247 aa16.88■□□□□ 0.29
RACK1-230ENST00000513060 NPR1P16066 1061 aa16.88■□□□□ 0.29
RACK1-230ENST00000513060 IL15P40933 162 aaPredicted RBP16.88■□□□□ 0.29
RACK1-230ENST00000513060 GRAPQ13588 217 aa16.88■□□□□ 0.29
RACK1-230ENST00000513060 GRAPLQ8TC17 118 aaPredicted RBP16.88■□□□□ 0.29
RACK1-230ENST00000513060 KIF1BPQ96EK5 621 aa16.88■□□□□ 0.29
RACK1-230ENST00000513060 MASTLQ96GX5 879 aa16.88■□□□□ 0.29
RACK1-230ENST00000513060 ZBTB47Q9UFB7 747 aaPredicted RBP16.88■□□□□ 0.29
RACK1-230ENST00000513060 PDZRN3Q9UPQ7 1066 aa16.88■□□□□ 0.29
RACK1-230ENST00000513060 RIPOR2Q9Y4F9 1068 aa16.88■□□□□ 0.29
RACK1-230ENST00000513060 CHRNA5P30532 468 aa16.87■□□□□ 0.29
RACK1-230ENST00000513060 CHD1LQ86WJ1 897 aa16.87■□□□□ 0.29
RACK1-230ENST00000513060 CRAMP1Q96RY5 1269 aa16.87■□□□□ 0.29
RACK1-230ENST00000513060 BSDC1Q9NW68 430 aaPredicted RBP16.87■□□□□ 0.29
RACK1-230ENST00000513060 ANKRD31Q8N7Z5 1873 aa16.86■□□□□ 0.29
RACK1-230ENST00000513060 ZNF622Q969S3 477 aaKnown RBP eCLIP16.86■□□□□ 0.29
RACK1-230ENST00000513060 LNPKQ9C0E8 428 aa16.86■□□□□ 0.29
RACK1-230ENST00000513060 IL1RAPL2Q9NP60 686 aa16.86■□□□□ 0.29
RACK1-230ENST00000513060 PPP1R1BQ9UD71 204 aaPredicted RBP16.86■□□□□ 0.29
RACK1-230ENST00000513060 TFCP2Q12800 502 aa16.85■□□□□ 0.29
RACK1-230ENST00000513060 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.85■□□□□ 0.29
RACK1-230ENST00000513060 BBOX1O75936 387 aa16.85■□□□□ 0.29
RACK1-230ENST00000513060 ALDH1B1P30837 517 aa16.85■□□□□ 0.29
RACK1-230ENST00000513060 METTL24Q5JXM2 366 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms