RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 LARP1Q6PKG0 1096 aaKnown RBP9.75□□□□□ -0.85
RFC1-215ENST00000512881 TSEN34Q9BSV6 310 aaKnown RBP9.75□□□□□ -0.85
RFC1-215ENST00000512881 USP35Q9P2H5 1018 aa9.75□□□□□ -0.85
RFC1-215ENST00000512881 CPDO75976 1380 aa9.75□□□□□ -0.85
RFC1-215ENST00000512881 NWD2Q9ULI1 1742 aa9.74□□□□□ -0.85
RFC1-215ENST00000512881 ESPNB1AK53 854 aa9.74□□□□□ -0.85
RFC1-215ENST00000512881 FBXO45P0C2W1 286 aa9.74□□□□□ -0.85
RFC1-215ENST00000512881 BANK1Q8NDB2 785 aa9.74□□□□□ -0.85
RFC1-215ENST00000512881 CARD11Q9BXL7 1154 aa9.74□□□□□ -0.85
RFC1-215ENST00000512881 DNMT3LQ9UJW3 386 aa9.74□□□□□ -0.85
RFC1-215ENST00000512881 COL14A1Q05707 1796 aaKnown RBP9.73□□□□□ -0.85
RFC1-215ENST00000512881 ZBTB7CA1YPR0 619 aa9.73□□□□□ -0.85
RFC1-215ENST00000512881 ZBBXA8MT70 800 aa9.73□□□□□ -0.85
RFC1-215ENST00000512881 BAG6P46379 1132 aa9.73□□□□□ -0.85
RFC1-215ENST00000512881 TRIM26Q12899 539 aaPredicted RBP9.73□□□□□ -0.85
RFC1-215ENST00000512881 DZIP3Q86Y13 1208 aaKnown RBP9.73□□□□□ -0.85
RFC1-215ENST00000512881 TCP11L2Q8N4U5 519 aa9.73□□□□□ -0.85
RFC1-215ENST00000512881 TTC21BQ7Z4L5 1316 aa9.73□□□□□ -0.85
RFC1-215ENST00000512881 PLCH1Q4KWH8 1693 aa9.73□□□□□ -0.85
RFC1-215ENST00000512881 ABCA3Q99758 1704 aa9.73□□□□□ -0.85
RFC1-215ENST00000512881 USP6P35125 1406 aa9.73□□□□□ -0.85
RFC1-215ENST00000512881 MAN1A2O60476 641 aa9.72□□□□□ -0.85
RFC1-215ENST00000512881 PDE3BQ13370 1112 aa9.72□□□□□ -0.85
RFC1-215ENST00000512881 FAM196AQ6ZSG2 479 aa9.72□□□□□ -0.85
RFC1-215ENST00000512881 TMPRSS4Q9NRS4 437 aa9.72□□□□□ -0.85
RFC1-215ENST00000512881 TONSLQ96HA7 1378 aa9.72□□□□□ -0.85
RFC1-215ENST00000512881 SSH2Q76I76 1423 aa9.72□□□□□ -0.85
RFC1-215ENST00000512881 ITSN1Q15811 1721 aa9.71□□□□□ -0.85
RFC1-215ENST00000512881 RAB15P59190 212 aa9.71□□□□□ -0.86
RFC1-215ENST00000512881 ZNF784Q8NCA9 323 aaPredicted RBP9.71□□□□□ -0.86
RFC1-215ENST00000512881 SLC16A10Q8TF71 515 aa9.71□□□□□ -0.86
RFC1-215ENST00000512881 THRAP3Q9Y2W1 955 aaKnown RBP9.71□□□□□ -0.86
RFC1-215ENST00000512881 ERBB4Q15303 1308 aa9.71□□□□□ -0.86
RFC1-215ENST00000512881 CAMTA1Q9Y6Y1 1673 aa9.71□□□□□ -0.86
RFC1-215ENST00000512881 ERVH48-1M5A8F1 160 aa9.7□□□□□ -0.86
RFC1-215ENST00000512881 SPINT1O43278 529 aa9.7□□□□□ -0.86
RFC1-215ENST00000512881 TRIM37O94972 964 aa9.7□□□□□ -0.86
RFC1-215ENST00000512881 ARHGEF25Q86VW2 580 aa9.7□□□□□ -0.86
RFC1-215ENST00000512881 KCNH5Q8NCM2 988 aa9.7□□□□□ -0.86
RFC1-215ENST00000512881 TMC1Q8TDI8 760 aa9.7□□□□□ -0.86
RFC1-215ENST00000512881 SNRKQ9NRH2 765 aa9.7□□□□□ -0.86
RFC1-215ENST00000512881 TTC21AQ8NDW8 1320 aa9.7□□□□□ -0.86
RFC1-215ENST00000512881 AATKQ6ZMQ8 1374 aa9.7□□□□□ -0.86
RFC1-215ENST00000512881 TOPAZ1Q8N9V7 1692 aa9.7□□□□□ -0.86
RFC1-215ENST00000512881 NRAPQ86VF7 1730 aa9.7□□□□□ -0.86
RFC1-215ENST00000512881 LILRA1O75019 489 aa9.69□□□□□ -0.86
RFC1-215ENST00000512881 TRPM1Q7Z4N2 1603 aa9.69□□□□□ -0.86
RFC1-215ENST00000512881 KTN1Q86UP2 1357 aaKnown RBP9.69□□□□□ -0.86
RFC1-215ENST00000512881 IRF7Q92985 503 aa9.69□□□□□ -0.86
RFC1-215ENST00000512881 AGBL1Q96MI9 1066 aa9.69□□□□□ -0.86
RFC1-215ENST00000512881 SLC12A5Q9H2X9 1139 aa9.69□□□□□ -0.86
RFC1-215ENST00000512881 CRYBG1Q9Y4K1 1723 aa9.68□□□□□ -0.86
RFC1-215ENST00000512881 CPSF1Q10570 1443 aaKnown RBP9.68□□□□□ -0.86
RFC1-215ENST00000512881 SBNO2Q9Y2G9 1366 aa9.68□□□□□ -0.86
RFC1-215ENST00000512881 TTLL8A6PVC2 850 aa9.68□□□□□ -0.86
RFC1-215ENST00000512881 APBA3O96018 575 aa9.68□□□□□ -0.86
RFC1-215ENST00000512881 PRKCSHP14314 528 aaPredicted RBP9.68□□□□□ -0.86
RFC1-215ENST00000512881 GMPRP36959 345 aa9.68□□□□□ -0.86
RFC1-215ENST00000512881 TOM1L2Q6ZVM7 507 aa9.68□□□□□ -0.86
RFC1-215ENST00000512881 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.68□□□□□ -0.86
RFC1-215ENST00000512881 CAMKK2Q96RR4 588 aa9.68□□□□□ -0.86
RFC1-215ENST00000512881 PCDHB9Q9Y5E1 797 aa9.68□□□□□ -0.86
RFC1-215ENST00000512881 NDUFB9Q9Y6M9 179 aa9.68□□□□□ -0.86
RFC1-215ENST00000512881 BRWD3Q6RI45 1802 aa9.68□□□□□ -0.86
RFC1-215ENST00000512881 QRICH2Q9H0J4 1663 aa9.67□□□□□ -0.86
RFC1-215ENST00000512881 COL5A2P05997 1499 aaPredicted RBP9.67□□□□□ -0.86
RFC1-215ENST00000512881 ST20-MTHFSA0A0A6YYL1 179 aa9.67□□□□□ -0.86
RFC1-215ENST00000512881 VSIG8P0DPA2 414 aa9.67□□□□□ -0.86
RFC1-215ENST00000512881 EZH2Q15910 746 aaKnown RBP9.67□□□□□ -0.86
RFC1-215ENST00000512881 HDGFL2Q7Z4V5 671 aaPredicted RBP9.67□□□□□ -0.86
RFC1-215ENST00000512881 PUS7Q96PZ0 661 aaKnown RBP9.67□□□□□ -0.86
RFC1-215ENST00000512881 NRKQ7Z2Y5 1582 aa9.67□□□□□ -0.86
RFC1-215ENST00000512881 CRB1P82279 1406 aa9.66□□□□□ -0.86
RFC1-215ENST00000512881 WDR17Q8IZU2 1322 aa9.66□□□□□ -0.86
RFC1-215ENST00000512881 ADH1AP07327 375 aa9.66□□□□□ -0.86
RFC1-215ENST00000512881 RELBQ01201 579 aa9.66□□□□□ -0.86
RFC1-215ENST00000512881 NR1H3Q13133 447 aa9.66□□□□□ -0.86
RFC1-215ENST00000512881 NME9Q86XW9 330 aa9.66□□□□□ -0.86
RFC1-215ENST00000512881 TERF2IPQ9NYB0 399 aa9.66□□□□□ -0.86
RFC1-215ENST00000512881 PHRF1Q9P1Y6 1649 aaKnown RBP9.66□□□□□ -0.86
RFC1-215ENST00000512881 SLIT3O75094 1523 aa9.66□□□□□ -0.86
RFC1-215ENST00000512881 THSD7AQ9UPZ6 1657 aa9.65□□□□□ -0.86
RFC1-215ENST00000512881 CSB-PGBD3P0DP91 1061 aa9.65□□□□□ -0.86
RFC1-215ENST00000512881 ADD1P35611 737 aaKnown RBP9.65□□□□□ -0.86
RFC1-215ENST00000512881 INSM1Q01101 510 aaPredicted RBP9.65□□□□□ -0.86
RFC1-215ENST00000512881 DDB1Q16531 1140 aa9.65□□□□□ -0.86
RFC1-215ENST00000512881 KDF1Q8NAX2 398 aaPredicted RBP9.65□□□□□ -0.86
RFC1-215ENST00000512881 TESK2Q96S53 571 aa9.65□□□□□ -0.86
RFC1-215ENST00000512881 CARD10Q9BWT7 1032 aa9.65□□□□□ -0.86
RFC1-215ENST00000512881 DISP2A7MBM2 1401 aa9.65□□□□□ -0.87
RFC1-215ENST00000512881 USP31Q70CQ4 1352 aa9.64□□□□□ -0.87
RFC1-215ENST00000512881 PPFIA3O75145 1194 aa9.64□□□□□ -0.87
RFC1-215ENST00000512881 GIGYF1O75420 1035 aaPredicted RBP9.64□□□□□ -0.87
RFC1-215ENST00000512881 CTSOP43234 321 aaPredicted RBP9.64□□□□□ -0.87
RFC1-215ENST00000512881 R3HDM1Q15032 1099 aaKnown RBP9.64□□□□□ -0.87
RFC1-215ENST00000512881 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.64□□□□□ -0.876e-6■□□□□ 8.6
RFC1-215ENST00000512881 INSM2Q96T92 566 aaPredicted RBP9.64□□□□□ -0.87
RFC1-215ENST00000512881 CDCA7Q9BWT1 371 aaPredicted RBP9.64□□□□□ -0.87
RFC1-215ENST00000512881 LMO7Q8WWI1 1683 aa9.64□□□□□ -0.87
RFC1-215ENST00000512881 APBB1O00213 710 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms