RNA–Protein interactions for RNA: ENST00000512665.5

NEDD9-213, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-213ENST00000512665 POLR2AP24928 1970 aaKnown RBP13.36□□□□□ -0.27
NEDD9-213ENST00000512665 H0YGN5 161 aa13.36□□□□□ -0.27
NEDD9-213ENST00000512665 EN2P19622 333 aaPredicted RBP13.36□□□□□ -0.27
NEDD9-213ENST00000512665 SAMD7Q7Z3H4 446 aa13.36□□□□□ -0.27
NEDD9-213ENST00000512665 SLC51AQ86UW1 340 aa13.36□□□□□ -0.27
NEDD9-213ENST00000512665 CDCA5Q96FF9 252 aa13.36□□□□□ -0.27
NEDD9-213ENST00000512665 CEMIPQ8WUJ3 1361 aa13.35□□□□□ -0.27
NEDD9-213ENST00000512665 FAM177BA6PVY3 158 aa13.35□□□□□ -0.27
NEDD9-213ENST00000512665 YDJCA8MPS7 323 aa13.35□□□□□ -0.27
NEDD9-213ENST00000512665 EGFRP00533 1210 aa13.35□□□□□ -0.27
NEDD9-213ENST00000512665 SREBF2Q12772 1141 aa13.35□□□□□ -0.27
NEDD9-213ENST00000512665 OTOP1Q7RTM1 612 aa13.35□□□□□ -0.27
NEDD9-213ENST00000512665 USP16Q9Y5T5 823 aa13.35□□□□□ -0.27
NEDD9-213ENST00000512665 UNC80Q8N2C7 3258 aa13.35□□□□□ -0.27
NEDD9-213ENST00000512665 LAMA3Q16787 3333 aa13.34□□□□□ -0.27
NEDD9-213ENST00000512665 PRAMEF22A3QJZ6 481 aa13.34□□□□□ -0.27
NEDD9-213ENST00000512665 TBC1D10BQ4KMP7 808 aaPredicted RBP13.34□□□□□ -0.27
NEDD9-213ENST00000512665 DPP8Q6V1X1 898 aaPredicted RBP13.34□□□□□ -0.27
NEDD9-213ENST00000512665 NUTM1Q86Y26 1132 aa13.34□□□□□ -0.27
NEDD9-213ENST00000512665 TRIM17Q9Y577 477 aa13.34□□□□□ -0.27
NEDD9-213ENST00000512665 DUOX1Q9NRD9 1551 aa13.33□□□□□ -0.28
NEDD9-213ENST00000512665 ZNF609O15014 1411 aa13.33□□□□□ -0.28
NEDD9-213ENST00000512665 ERVV-1B6SEH8 477 aa13.33□□□□□ -0.28
NEDD9-213ENST00000512665 ALDH1A1P00352 501 aa13.33□□□□□ -0.28
NEDD9-213ENST00000512665 HLFQ16534 295 aa13.33□□□□□ -0.28
NEDD9-213ENST00000512665 CHRDL2Q6WN34 429 aa13.33□□□□□ -0.28
NEDD9-213ENST00000512665 IL17REQ8NFR9 667 aa13.33□□□□□ -0.28
NEDD9-213ENST00000512665 PRO3102Q9H379 93 aa13.33□□□□□ -0.28
NEDD9-213ENST00000512665 GGA3Q9NZ52 723 aa13.33□□□□□ -0.28
NEDD9-213ENST00000512665 RBM27Q9P2N5 1060 aaKnown RBP13.33□□□□□ -0.28
NEDD9-213ENST00000512665 NBPF26B4DH59 902 aa13.32□□□□□ -0.28
NEDD9-213ENST00000512665 PIP4K2AP48426 406 aaPredicted RBP13.32□□□□□ -0.28
NEDD9-213ENST00000512665 KIF4BQ2VIQ3 1234 aa13.32□□□□□ -0.28
NEDD9-213ENST00000512665 NBPF10Q6P3W6 841 aaKnown RBP13.32□□□□□ -0.28
NEDD9-213ENST00000512665 SP8Q8IXZ3 490 aa13.32□□□□□ -0.28
NEDD9-213ENST00000512665 PTPN22Q9Y2R2 807 aa13.32□□□□□ -0.28
NEDD9-213ENST00000512665 ZBTB12Q9Y330 459 aaPredicted RBP13.32□□□□□ -0.28
NEDD9-213ENST00000512665 DDX60Q8IY21 1712 aaKnown RBP13.31□□□□□ -0.28
NEDD9-213ENST00000512665 A0A1W2PPC1 479 aa13.31□□□□□ -0.28
NEDD9-213ENST00000512665 PSMD14O00487 310 aa13.31□□□□□ -0.28
NEDD9-213ENST00000512665 BBOX1O75936 387 aa13.31□□□□□ -0.28
NEDD9-213ENST00000512665 SNRPA1P09661 255 aaKnown RBP13.31□□□□□ -0.28
NEDD9-213ENST00000512665 MPNDQ8N594 471 aa13.31□□□□□ -0.28
NEDD9-213ENST00000512665 NECTIN2Q92692 538 aa13.31□□□□□ -0.28
NEDD9-213ENST00000512665 LRRC37AA6NMS7 1700 aa13.3□□□□□ -0.28
NEDD9-213ENST00000512665 KDM3BQ7LBC6 1761 aa13.3□□□□□ -0.28
NEDD9-213ENST00000512665 GNAT3A8MTJ3 354 aa13.3□□□□□ -0.28
NEDD9-213ENST00000512665 TCERG1O14776 1098 aaKnown RBP13.3□□□□□ -0.28
NEDD9-213ENST00000512665 ZNF333Q96JL9 665 aa13.3□□□□□ -0.28
NEDD9-213ENST00000512665 TMEM106CQ9BVX2 250 aa13.3□□□□□ -0.28
NEDD9-213ENST00000512665 R3HDMLQ9H3Y0 253 aa13.3□□□□□ -0.28
NEDD9-213ENST00000512665 ABCC4O15439 1325 aa13.3□□□□□ -0.28
NEDD9-213ENST00000512665 LAMB1P07942 1786 aa13.3□□□□□ -0.28
NEDD9-213ENST00000512665 NUP98P52948 1817 aa13.29□□□□□ -0.28
NEDD9-213ENST00000512665 HMOX1P09601 288 aa13.29□□□□□ -0.28
NEDD9-213ENST00000512665 ERO1AQ96HE7 468 aa13.29□□□□□ -0.28
NEDD9-213ENST00000512665 UBN2Q6ZU65 1347 aa13.29□□□□□ -0.28
NEDD9-213ENST00000512665 BTBD11A6QL63 1104 aa13.28□□□□□ -0.28
NEDD9-213ENST00000512665 KCNQ3O43525 872 aa13.28□□□□□ -0.28
NEDD9-213ENST00000512665 NTSR2O95665 410 aa13.28□□□□□ -0.28
NEDD9-213ENST00000512665 C3orf67Q6ZVT6 689 aa13.28□□□□□ -0.28
NEDD9-213ENST00000512665 GAS2L2Q8NHY3 880 aa13.28□□□□□ -0.28
NEDD9-213ENST00000512665 NLRP3Q96P20 1036 aa13.28□□□□□ -0.28
NEDD9-213ENST00000512665 LAMB4A4D0S4 1761 aa13.27□□□□□ -0.28
NEDD9-213ENST00000512665 ANKRD36CQ5JPF3 1778 aa13.27□□□□□ -0.28
NEDD9-213ENST00000512665 INHBEP58166 350 aa13.27□□□□□ -0.29
NEDD9-213ENST00000512665 SLC10A5Q5PT55 438 aa13.27□□□□□ -0.29
NEDD9-213ENST00000512665 TMC4Q7Z404 712 aa13.27□□□□□ -0.29
NEDD9-213ENST00000512665 MORC1Q86VD1 984 aa13.27□□□□□ -0.29
NEDD9-213ENST00000512665 MAP3K15Q6ZN16 1313 aa13.27□□□□□ -0.29
NEDD9-213ENST00000512665 ZNF280AP59817 542 aaPredicted RBP13.26□□□□□ -0.29
NEDD9-213ENST00000512665 RBM26Q5T8P6 1007 aaKnown RBP13.26□□□□□ -0.29
NEDD9-213ENST00000512665 ANGEL2Q5VTE6 544 aaKnown RBP13.26□□□□□ -0.29
NEDD9-213ENST00000512665 SUSD4Q5VX71 490 aa13.26□□□□□ -0.29
NEDD9-213ENST00000512665 GPR153Q6NV75 609 aa13.26□□□□□ -0.29
NEDD9-213ENST00000512665 RTL9Q8NET4 1388 aa13.26□□□□□ -0.29
NEDD9-213ENST00000512665 COL25A1Q9BXS0 654 aaPredicted RBP13.26□□□□□ -0.29
NEDD9-213ENST00000512665 ASTN2O75129 1339 aaPredicted RBP13.25□□□□□ -0.29
NEDD9-213ENST00000512665 ZNF34Q8IZ26 560 aa13.25□□□□□ -0.29
NEDD9-213ENST00000512665 UBE2Q2LH0YL09 131 aa13.24□□□□□ -0.29
NEDD9-213ENST00000512665 VIL1P09327 827 aaKnown RBP13.24□□□□□ -0.29
NEDD9-213ENST00000512665 PARP10Q53GL7 1025 aa13.24□□□□□ -0.29
NEDD9-213ENST00000512665 MOB2Q70IA6 237 aa13.24□□□□□ -0.29
NEDD9-213ENST00000512665 NBPF11Q86T75 865 aa13.24□□□□□ -0.29
NEDD9-213ENST00000512665 EFCC1Q9HA90 598 aa13.24□□□□□ -0.29
NEDD9-213ENST00000512665 MANSC4A6NHS7 340 aaPredicted RBP13.23□□□□□ -0.29
NEDD9-213ENST00000512665 TCIRG1Q13488 830 aa13.23□□□□□ -0.29
NEDD9-213ENST00000512665 SCARF1Q14162 830 aa13.23□□□□□ -0.29
NEDD9-213ENST00000512665 WASHC4Q2M389 1173 aa13.23□□□□□ -0.29
NEDD9-213ENST00000512665 SPRYD7Q5W111 196 aa13.23□□□□□ -0.29
NEDD9-213ENST00000512665 ANKRD13DQ6ZTN6 518 aa13.23□□□□□ -0.29
NEDD9-213ENST00000512665 PPP1R42Q7Z4L9 355 aa13.23□□□□□ -0.29
NEDD9-213ENST00000512665 IFNL1Q8IU54 200 aa13.23□□□□□ -0.29
NEDD9-213ENST00000512665 STXBP5LQ9Y2K9 1186 aa13.23□□□□□ -0.29
NEDD9-213ENST00000512665 VCANP13611 3396 aa13.23□□□□□ -0.29
NEDD9-213ENST00000512665 LAMB2P55268 1798 aa13.22□□□□□ -0.29
NEDD9-213ENST00000512665 GRAPQ13588 217 aa13.22□□□□□ -0.29
NEDD9-213ENST00000512665 KIF6Q6ZMV9 814 aa13.22□□□□□ -0.29
NEDD9-213ENST00000512665 GRAPLQ8TC17 118 aaPredicted RBP13.22□□□□□ -0.29
NEDD9-213ENST00000512665 DBNDD1Q9H9R9 158 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms