RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 PTPRCP08575 1304 aa11.85□□□□□ -0.51
MSH3-203ENST00000512531 VAMP4O75379 141 aa11.84□□□□□ -0.51
MSH3-203ENST00000512531 HIC1Q14526 733 aa11.84□□□□□ -0.51
MSH3-203ENST00000512531 RTL5Q5HYW3 569 aaPredicted RBP11.84□□□□□ -0.51
MSH3-203ENST00000512531 AKAP4Q5JQC9 854 aa11.84□□□□□ -0.51
MSH3-203ENST00000512531 GCC1Q96CN9 775 aa11.84□□□□□ -0.51
MSH3-203ENST00000512531 OCEL1Q9H607 264 aa11.84□□□□□ -0.51
MSH3-203ENST00000512531 NMRK2Q9NPI5 230 aa11.84□□□□□ -0.51
MSH3-203ENST00000512531 DLG5Q8TDM6 1919 aa11.84□□□□□ -0.51
MSH3-203ENST00000512531 POLRMTO00411 1230 aaKnown RBP11.83□□□□□ -0.52
MSH3-203ENST00000512531 PTCD1O75127 700 aaKnown RBP11.83□□□□□ -0.52
MSH3-203ENST00000512531 DDR1Q08345 913 aa11.83□□□□□ -0.52
MSH3-203ENST00000512531 PTGDRQ13258 359 aa11.83□□□□□ -0.52
MSH3-203ENST00000512531 BECN1Q14457 450 aa11.83□□□□□ -0.52
MSH3-203ENST00000512531 INTS5Q6P9B9 1019 aaKnown RBP11.83□□□□□ -0.52
MSH3-203ENST00000512531 C16orf71Q8IYS4 520 aaPredicted RBP11.83□□□□□ -0.52
MSH3-203ENST00000512531 JMYQ8N9B5 988 aa11.83□□□□□ -0.52
MSH3-203ENST00000512531 ZPR1O75312 459 aa11.82□□□□□ -0.52
MSH3-203ENST00000512531 IGHDP01880 384 aa11.82□□□□□ -0.52
MSH3-203ENST00000512531 RLBP1P12271 317 aa11.82□□□□□ -0.52
MSH3-203ENST00000512531 AEBP1Q8IUX7 1158 aa11.82□□□□□ -0.52
MSH3-203ENST00000512531 TMEM57Q8N5G2 664 aa11.82□□□□□ -0.52
MSH3-203ENST00000512531 MRPL50Q8N5N7 158 aaKnown RBP11.82□□□□□ -0.52
MSH3-203ENST00000512531 STK31Q9BXU1 1019 aa11.82□□□□□ -0.52
MSH3-203ENST00000512531 SLC52A2Q9HAB3 445 aa11.82□□□□□ -0.52
MSH3-203ENST00000512531 TJP1Q07157 1748 aa11.82□□□□□ -0.52
MSH3-203ENST00000512531 MRC1P22897 1456 aa11.82□□□□□ -0.52
MSH3-203ENST00000512531 SCN11AQ9UI33 1791 aa11.82□□□□□ -0.52
MSH3-203ENST00000512531 ADAMTS7Q9UKP4 1686 aa11.81□□□□□ -0.52
MSH3-203ENST00000512531 CHL1O00533 1208 aa11.81□□□□□ -0.52
MSH3-203ENST00000512531 ASTLQ6HA08 431 aaPredicted RBP11.81□□□□□ -0.52
MSH3-203ENST00000512531 KLRG1Q96E93 195 aa11.81□□□□□ -0.52
MSH3-203ENST00000512531 ZBTB40Q9NUA8 1239 aa11.81□□□□□ -0.52
MSH3-203ENST00000512531 SRP68Q9UHB9 627 aaKnown RBP11.81□□□□□ -0.52
MSH3-203ENST00000512531 NARFQ9UHQ1 456 aa11.81□□□□□ -0.52
MSH3-203ENST00000512531 VIRMAQ69YN4 1812 aaKnown RBP11.81□□□□□ -0.52
MSH3-203ENST00000512531 GNAT3A8MTJ3 354 aa11.8□□□□□ -0.52
MSH3-203ENST00000512531 CYP19A1P11511 503 aaPredicted RBP11.8□□□□□ -0.52
MSH3-203ENST00000512531 RNF181Q9P0P0 153 aa11.8□□□□□ -0.52
MSH3-203ENST00000512531 TSPYL4Q9UJ04 414 aa11.8□□□□□ -0.52
MSH3-203ENST00000512531 PDZRN3Q9UPQ7 1066 aa11.8□□□□□ -0.52
MSH3-203ENST00000512531 PCDHB15Q9Y5E8 787 aa11.8□□□□□ -0.52
MSH3-203ENST00000512531 WDR90Q96KV7 1748 aa11.8□□□□□ -0.52
MSH3-203ENST00000512531 SBF1O95248 1867 aa11.79□□□□□ -0.52
MSH3-203ENST00000512531 TNRC6CQ9HCJ0 1690 aaKnown RBP11.79□□□□□ -0.52
MSH3-203ENST00000512531 HMMRO75330 724 aa11.79□□□□□ -0.52
MSH3-203ENST00000512531 GIGYF2Q6Y7W6 1299 aaKnown RBP11.79□□□□□ -0.52
MSH3-203ENST00000512531 DNAJC10Q8IXB1 793 aa11.79□□□□□ -0.52
MSH3-203ENST00000512531 SMC1BQ8NDV3 1235 aa11.79□□□□□ -0.52
MSH3-203ENST00000512531 NRXN2Q9P2S2 1712 aa11.79□□□□□ -0.52
MSH3-203ENST00000512531 ABCC4O15439 1325 aa11.79□□□□□ -0.52
MSH3-203ENST00000512531 KCPQ6ZWJ8 1503 aa11.78□□□□□ -0.52
MSH3-203ENST00000512531 RNMTO43148 476 aaKnown RBP11.78□□□□□ -0.52
MSH3-203ENST00000512531 LMNB1P20700 586 aa11.78□□□□□ -0.52
MSH3-203ENST00000512531 CHRNA5P30532 468 aa11.78□□□□□ -0.52
MSH3-203ENST00000512531 C8orf34Q49A92 452 aa11.78□□□□□ -0.52
MSH3-203ENST00000512531 CCDC30Q5VVM6 783 aa11.78□□□□□ -0.52
MSH3-203ENST00000512531 USPL1Q5W0Q7 1092 aa11.78□□□□□ -0.52
MSH3-203ENST00000512531 SMC5Q8IY18 1101 aa11.78□□□□□ -0.52
MSH3-203ENST00000512531 ARID3AQ99856 593 aa11.78□□□□□ -0.52
MSH3-203ENST00000512531 TMUB1Q9BVT8 246 aa11.78□□□□□ -0.52
MSH3-203ENST00000512531 CDHR5Q9HBB8 845 aa11.78□□□□□ -0.52
MSH3-203ENST00000512531 NPDC1Q9NQX5 325 aaPredicted RBP11.78□□□□□ -0.52
MSH3-203ENST00000512531 A0A087WZG4 1122 aa11.77□□□□□ -0.53
MSH3-203ENST00000512531 GLTPD2A6NH11 291 aa11.77□□□□□ -0.53
MSH3-203ENST00000512531 EVI5O60447 810 aa11.77□□□□□ -0.53
MSH3-203ENST00000512531 CCT4P50991 539 aaKnown RBP11.77□□□□□ -0.53
MSH3-203ENST00000512531 NFIXQ14938 502 aa11.77□□□□□ -0.53
MSH3-203ENST00000512531 TTLL6Q8N841 843 aa11.77□□□□□ -0.53
MSH3-203ENST00000512531 THUMPD2Q9BTF0 503 aaKnown RBP11.77□□□□□ -0.53
MSH3-203ENST00000512531 COL15A1P39059 1388 aa11.77□□□□□ -0.53
MSH3-203ENST00000512531 SERPINB2P05120 415 aa11.76□□□□□ -0.53
MSH3-203ENST00000512531 VEGFAP15692 232 aaPredicted RBP11.76□□□□□ -0.53
MSH3-203ENST00000512531 MTHFSDQ2M296 383 aaKnown RBP11.76□□□□□ -0.53
MSH3-203ENST00000512531 IER5LQ5T953 404 aa11.76□□□□□ -0.53
MSH3-203ENST00000512531 RPAP2Q8IXW5 612 aaPredicted RBP11.76□□□□□ -0.53
MSH3-203ENST00000512531 PHOX2BQ99453 314 aa11.76□□□□□ -0.53
MSH3-203ENST00000512531 TEX13AQ9BXU3 409 aaPredicted RBP11.76□□□□□ -0.53
MSH3-203ENST00000512531 RRAGCQ9HB90 399 aa11.76□□□□□ -0.53
MSH3-203ENST00000512531 LGR6Q9HBX8 967 aa11.76□□□□□ -0.53
MSH3-203ENST00000512531 GOPCQ9HD26 462 aa11.76□□□□□ -0.53
MSH3-203ENST00000512531 DLEC1Q9Y238 1755 aa11.76□□□□□ -0.53
MSH3-203ENST00000512531 ELL2O00472 640 aaPredicted RBP11.75□□□□□ -0.53
MSH3-203ENST00000512531 ZBTB7BO15156 539 aaPredicted RBP11.75□□□□□ -0.53
MSH3-203ENST00000512531 STARD3NLO95772 234 aa11.75□□□□□ -0.53
MSH3-203ENST00000512531 EIF5P55010 431 aaKnown RBP11.75□□□□□ -0.53
MSH3-203ENST00000512531 TTLL12Q14166 644 aaPredicted RBP11.75□□□□□ -0.53
MSH3-203ENST00000512531 INTS3Q68E01 1043 aaKnown RBP11.75□□□□□ -0.53
MSH3-203ENST00000512531 MCM10Q7L590 875 aa11.75□□□□□ -0.53
MSH3-203ENST00000512531 C8orf58Q8NAV2 365 aa11.75□□□□□ -0.53
MSH3-203ENST00000512531 BCL2L12Q9HB09 334 aa11.75□□□□□ -0.53
MSH3-203ENST00000512531 PODXL2Q9NZ53 605 aa11.75□□□□□ -0.53
MSH3-203ENST00000512531 HDAC5Q9UQL6 1122 aa11.75□□□□□ -0.53
MSH3-203ENST00000512531 COLQQ9Y215 455 aaPredicted RBP11.75□□□□□ -0.53
MSH3-203ENST00000512531 CACNA1FO60840 1977 aa11.75□□□□□ -0.53
MSH3-203ENST00000512531 AFDNP55196 1824 aaKnown RBP11.74□□□□□ -0.53
MSH3-203ENST00000512531 H0YIN7 160 aa11.74□□□□□ -0.53
MSH3-203ENST00000512531 NUCB1Q02818 461 aa11.74□□□□□ -0.53
MSH3-203ENST00000512531 DCTN1Q14203 1278 aa11.74□□□□□ -0.53
MSH3-203ENST00000512531 TAF7Q15545 349 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms