RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 RGMBQ6NW40 437 aa16.66■□□□□ 0.26
DDX41-215ENST00000512431 SLC51AQ86UW1 340 aa16.66■□□□□ 0.26
DDX41-215ENST00000512431 SP8Q8IXZ3 490 aa16.66■□□□□ 0.26
DDX41-215ENST00000512431 CCDC102AQ96A19 550 aa16.66■□□□□ 0.26
DDX41-215ENST00000512431 SAGE1Q9NXZ1 904 aa16.66■□□□□ 0.26
DDX41-215ENST00000512431 SOX10P56693 466 aa16.65■□□□□ 0.26
DDX41-215ENST00000512431 C3orf67Q6ZVT6 689 aa16.65■□□□□ 0.26
DDX41-215ENST00000512431 C2orf69Q8N8R5 385 aa16.65■□□□□ 0.26
DDX41-215ENST00000512431 TRPM4Q8TD43 1214 aa16.65■□□□□ 0.26
DDX41-215ENST00000512431 UTP14AQ9BVJ6 771 aaKnown RBP16.65■□□□□ 0.26
DDX41-215ENST00000512431 ABCC4O15439 1325 aa16.65■□□□□ 0.26
DDX41-215ENST00000512431 SLC10A5Q5PT55 438 aa16.64■□□□□ 0.25
DDX41-215ENST00000512431 ZIC5Q96T25 663 aa16.64■□□□□ 0.25
DDX41-215ENST00000512431 NUP98P52948 1817 aa16.63■□□□□ 0.25
DDX41-215ENST00000512431 ZNF157P51786 506 aaPredicted RBP16.63■□□□□ 0.25
DDX41-215ENST00000512431 MICALL2Q8IY33 904 aa16.63■□□□□ 0.25
DDX41-215ENST00000512431 TNRC18O15417 2968 aaPredicted RBP16.62■□□□□ 0.25
DDX41-215ENST00000512431 LAMB4A4D0S4 1761 aa16.62■□□□□ 0.25
DDX41-215ENST00000512431 TRPA1O75762 1119 aa16.62■□□□□ 0.25
DDX41-215ENST00000512431 EIF4A1P60842 406 aaKnown RBP16.62■□□□□ 0.25
DDX41-215ENST00000512431 KIF23Q02241 960 aaPredicted RBP16.62■□□□□ 0.25
DDX41-215ENST00000512431 DDX46Q7L014 1031 aaKnown RBP16.62■□□□□ 0.25
DDX41-215ENST00000512431 KRT26Q7Z3Y9 468 aa16.62■□□□□ 0.25
DDX41-215ENST00000512431 DCPSQ96C86 337 aaKnown RBP16.62■□□□□ 0.25
DDX41-215ENST00000512431 GBA2Q9HCG7 927 aaPredicted RBP16.62■□□□□ 0.25
DDX41-215ENST00000512431 ERBB4Q15303 1308 aa16.62■□□□□ 0.25
DDX41-215ENST00000512431 PRPF38BQ5VTL8 546 aaKnown RBP16.61■□□□□ 0.25
DDX41-215ENST00000512431 DPF2Q92785 391 aa16.61■□□□□ 0.25
DDX41-215ENST00000512431 FAM155AB1AL88 458 aaPredicted RBP16.6■□□□□ 0.25
DDX41-215ENST00000512431 SAMD7Q7Z3H4 446 aa16.6■□□□□ 0.25
DDX41-215ENST00000512431 TMC4Q7Z404 712 aa16.6■□□□□ 0.25
DDX41-215ENST00000512431 RNF186Q9NXI6 227 aa16.6■□□□□ 0.25
DDX41-215ENST00000512431 ZBTB12Q9Y330 459 aaPredicted RBP16.6■□□□□ 0.25
DDX41-215ENST00000512431 SHTN1A0MZ66 631 aa16.59■□□□□ 0.25
DDX41-215ENST00000512431 YDJCA8MPS7 323 aa16.59■□□□□ 0.25
DDX41-215ENST00000512431 GRAPQ13588 217 aa16.59■□□□□ 0.25
DDX41-215ENST00000512431 WASHC4Q2M389 1173 aa16.59■□□□□ 0.25
DDX41-215ENST00000512431 TBC1D10BQ4KMP7 808 aaPredicted RBP16.59■□□□□ 0.25
DDX41-215ENST00000512431 HSP90AB3PQ58FF7 597 aa16.59■□□□□ 0.25
DDX41-215ENST00000512431 CTU1Q7Z7A3 348 aaKnown RBP16.59■□□□□ 0.25
DDX41-215ENST00000512431 REM2Q8IYK8 340 aaPredicted RBP16.59■□□□□ 0.25
DDX41-215ENST00000512431 GRAPLQ8TC17 118 aaPredicted RBP16.59■□□□□ 0.25
DDX41-215ENST00000512431 CCER1Q8TC90 406 aaPredicted RBP16.59■□□□□ 0.25
DDX41-215ENST00000512431 RBM26Q5T8P6 1007 aaKnown RBP16.58■□□□□ 0.24
DDX41-215ENST00000512431 DLK2Q6UY11 383 aa16.58■□□□□ 0.24
DDX41-215ENST00000512431 PSMD14O00487 310 aa16.57■□□□□ 0.24
DDX41-215ENST00000512431 HCLS1P14317 486 aaPredicted RBP16.57■□□□□ 0.24
DDX41-215ENST00000512431 RPS12P25398 132 aaKnown RBP16.57■□□□□ 0.24
DDX41-215ENST00000512431 PPP2R1AP30153 589 aa16.57■□□□□ 0.24
DDX41-215ENST00000512431 ADM5C9JUS6 153 aa16.56■□□□□ 0.24
DDX41-215ENST00000512431 EIF2S2P20042 333 aaKnown RBP16.56■□□□□ 0.24
DDX41-215ENST00000512431 SULF1Q8IWU6 871 aa16.56■□□□□ 0.24
DDX41-215ENST00000512431 CSRNP1Q96S65 589 aa16.56■□□□□ 0.24
DDX41-215ENST00000512431 THUMPD2Q9BTF0 503 aaKnown RBP16.56■□□□□ 0.24
DDX41-215ENST00000512431 TRMT112Q9UI30 125 aaKnown RBP16.56■□□□□ 0.24
DDX41-215ENST00000512431 SH3TC1Q8TE82 1336 aa16.55■□□□□ 0.24
DDX41-215ENST00000512431 SLC10A3P09131 477 aa16.55■□□□□ 0.24
DDX41-215ENST00000512431 PKN2Q16513 984 aaKnown RBP16.55■□□□□ 0.24
DDX41-215ENST00000512431 DBNDD1Q9H9R9 158 aa16.55■□□□□ 0.24
DDX41-215ENST00000512431 NSFL1CQ9UNZ2 370 aaKnown RBP16.55■□□□□ 0.24
DDX41-215ENST00000512431 C6orf229H3BNL8 230 aa16.54■□□□□ 0.24
DDX41-215ENST00000512431 RIMBP2O15034 1052 aa16.54■□□□□ 0.24
DDX41-215ENST00000512431 NLRP10Q86W26 655 aa16.54■□□□□ 0.24
DDX41-215ENST00000512431 EYA3Q99504 573 aa16.54■□□□□ 0.24
DDX41-215ENST00000512431 HDAC9Q9UKV0 1011 aa16.54■□□□□ 0.24
DDX41-215ENST00000512431 EGFRP00533 1210 aa16.53■□□□□ 0.24
DDX41-215ENST00000512431 KIF4BQ2VIQ3 1234 aa16.53■□□□□ 0.24
DDX41-215ENST00000512431 PNNQ9H307 717 aaKnown RBP16.53■□□□□ 0.24
DDX41-215ENST00000512431 TSPYL4Q9UJ04 414 aa16.53■□□□□ 0.24
DDX41-215ENST00000512431 HPS5Q9UPZ3 1129 aa16.53■□□□□ 0.24
DDX41-215ENST00000512431 KDM3BQ7LBC6 1761 aa16.53■□□□□ 0.24
DDX41-215ENST00000512431 G3V3G9 751 aa16.52■□□□□ 0.24
DDX41-215ENST00000512431 AIMP1Q12904 312 aaKnown RBP16.52■□□□□ 0.24
DDX41-215ENST00000512431 TCIRG1Q13488 830 aa16.52■□□□□ 0.24
DDX41-215ENST00000512431 PDIA6Q15084 440 aa16.52■□□□□ 0.24
DDX41-215ENST00000512431 NFE2L2Q16236 605 aa16.52■□□□□ 0.24
DDX41-215ENST00000512431 DCAF8Q5TAQ9 597 aa16.52■□□□□ 0.24
DDX41-215ENST00000512431 COPS6Q7L5N1 327 aa16.52■□□□□ 0.24
DDX41-215ENST00000512431 ECE2O60344 883 aa16.51■□□□□ 0.23
DDX41-215ENST00000512431 LRP10Q7Z4F1 713 aa16.51■□□□□ 0.23
DDX41-215ENST00000512431 GCC1Q96CN9 775 aa16.51■□□□□ 0.23
DDX41-215ENST00000512431 CDCA5Q96FF9 252 aa16.51■□□□□ 0.23
DDX41-215ENST00000512431 GGA3Q9NZ52 723 aa16.51■□□□□ 0.23
DDX41-215ENST00000512431 MAPK8IP3Q9UPT6 1336 aa16.5■□□□□ 0.23
DDX41-215ENST00000512431 ANXA1P04083 346 aa16.5■□□□□ 0.23
DDX41-215ENST00000512431 DOK7Q18PE1 504 aa16.5■□□□□ 0.23
DDX41-215ENST00000512431 ZC3H12CQ9C0D7 883 aaKnown RBP16.5■□□□□ 0.23
DDX41-215ENST00000512431 ANKRD36CQ5JPF3 1778 aa16.49■□□□□ 0.23
DDX41-215ENST00000512431 AKAP11Q9UKA4 1901 aa16.49■□□□□ 0.23
DDX41-215ENST00000512431 FKBP1BP68106 108 aa16.49■□□□□ 0.23
DDX41-215ENST00000512431 PROSER3Q2NL68 480 aa16.49■□□□□ 0.23
DDX41-215ENST00000512431 PDE4DIPQ5VU43 2346 aa16.49■□□□□ 0.23
DDX41-215ENST00000512431 RASAL3Q86YV0 1011 aa16.49■□□□□ 0.23
DDX41-215ENST00000512431 XAGE3Q8WTP9 111 aa16.49■□□□□ 0.23
DDX41-215ENST00000512431 GPSM2P81274 684 aa16.48■□□□□ 0.23
DDX41-215ENST00000512431 KCNQ5Q9NR82 932 aa16.48■□□□□ 0.23
DDX41-215ENST00000512431 POLLQ9UGP5 575 aa16.48■□□□□ 0.23
DDX41-215ENST00000512431 DUOX1Q9NRD9 1551 aa16.47■□□□□ 0.23
DDX41-215ENST00000512431 VIL1P09327 827 aaKnown RBP16.47■□□□□ 0.23
DDX41-215ENST00000512431 NECTIN2Q92692 538 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms