RNA–Protein interactions for RNA: ENST00000512304.2

PROM1-213, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-213ENST00000512304 CTU1Q7Z7A3 348 aaKnown RBP12.32□□□□□ -0.44
PROM1-213ENST00000512304 MICALL2Q8IY33 904 aa12.32□□□□□ -0.44
PROM1-213ENST00000512304 BCL2L13Q9BXK5 485 aa12.32□□□□□ -0.44
PROM1-213ENST00000512304 ZBTB3Q9H5J0 574 aa12.32□□□□□ -0.44
PROM1-213ENST00000512304 KCNQ5Q9NR82 932 aa12.32□□□□□ -0.44
PROM1-213ENST00000512304 CNOT7Q9UIV1 285 aaKnown RBP12.32□□□□□ -0.44
PROM1-213ENST00000512304 KNSTRNQ9Y448 316 aa12.32□□□□□ -0.44
PROM1-213ENST00000512304 ZNF157P51786 506 aaPredicted RBP12.31□□□□□ -0.44
PROM1-213ENST00000512304 RBM26Q5T8P6 1007 aaKnown RBP12.31□□□□□ -0.44
PROM1-213ENST00000512304 CC2D2BQ6DHV5 1058 aa12.31□□□□□ -0.44
PROM1-213ENST00000512304 SCAF8Q9UPN6 1271 aaKnown RBP12.31□□□□□ -0.44
PROM1-213ENST00000512304 COL3A1P02461 1466 aaPredicted RBP12.3□□□□□ -0.44
PROM1-213ENST00000512304 NTSR2O95665 410 aa12.3□□□□□ -0.44
PROM1-213ENST00000512304 TBC1D8O95759 1140 aa12.3□□□□□ -0.44
PROM1-213ENST00000512304 MOB2Q70IA6 237 aa12.3□□□□□ -0.44
PROM1-213ENST00000512304 GAS2L2Q8NHY3 880 aa12.3□□□□□ -0.44
PROM1-213ENST00000512304 RBM17Q96I25 401 aaKnown RBP12.3□□□□□ -0.44
PROM1-213ENST00000512304 CRAMP1Q96RY5 1269 aa12.3□□□□□ -0.44
PROM1-213ENST00000512304 GBA2Q9HCG7 927 aaPredicted RBP12.3□□□□□ -0.44
PROM1-213ENST00000512304 SAGE1Q9NXZ1 904 aa12.3□□□□□ -0.44
PROM1-213ENST00000512304 ATP6V0A2Q9Y487 856 aa12.3□□□□□ -0.44
PROM1-213ENST00000512304 ABCC4O15439 1325 aa12.3□□□□□ -0.44
PROM1-213ENST00000512304 RIC1Q4ADV7 1423 aa12.29□□□□□ -0.44
PROM1-213ENST00000512304 TRIM26Q12899 539 aaPredicted RBP12.29□□□□□ -0.44
PROM1-213ENST00000512304 KRT26Q7Z3Y9 468 aa12.29□□□□□ -0.44
PROM1-213ENST00000512304 R3HDMLQ9H3Y0 253 aa12.29□□□□□ -0.44
PROM1-213ENST00000512304 RRP7AQ9Y3A4 280 aaKnown RBP12.29□□□□□ -0.44
PROM1-213ENST00000512304 MKI67P46013 3256 aaKnown RBP12.28□□□□□ -0.44
PROM1-213ENST00000512304 SLC10A3P09131 477 aa12.28□□□□□ -0.44
PROM1-213ENST00000512304 MYL6BP14649 208 aa12.28□□□□□ -0.44
PROM1-213ENST00000512304 PRKAR2BP31323 418 aa12.28□□□□□ -0.44
PROM1-213ENST00000512304 ZC3H15Q8WU90 426 aaKnown RBP12.28□□□□□ -0.44
PROM1-213ENST00000512304 ZNF296Q8WUU4 475 aaPredicted RBP12.28□□□□□ -0.44
PROM1-213ENST00000512304 RTFDC1Q9BY42 306 aaPredicted RBP12.28□□□□□ -0.44
PROM1-213ENST00000512304 KIF7Q2M1P5 1343 aa12.28□□□□□ -0.44
PROM1-213ENST00000512304 PSMD14O00487 310 aa12.27□□□□□ -0.45
PROM1-213ENST00000512304 KIAA2012Q0VF49 1180 aa12.27□□□□□ -0.45
PROM1-213ENST00000512304 MKRN4PQ13434 485 aaPredicted RBP12.27□□□□□ -0.45
PROM1-213ENST00000512304 DPP8Q6V1X1 898 aaPredicted RBP12.27□□□□□ -0.45
PROM1-213ENST00000512304 NYXQ9GZU5 481 aa12.27□□□□□ -0.45
PROM1-213ENST00000512304 MAP3K15Q6ZN16 1313 aa12.27□□□□□ -0.45
PROM1-213ENST00000512304 SIPA1L3O60292 1781 aaPredicted RBP12.27□□□□□ -0.45
PROM1-213ENST00000512304 TRPM7Q96QT4 1865 aa12.27□□□□□ -0.45
PROM1-213ENST00000512304 HAX1O00165 279 aa12.26□□□□□ -0.45
PROM1-213ENST00000512304 HCLS1P14317 486 aaPredicted RBP12.26□□□□□ -0.45
PROM1-213ENST00000512304 RASAL3Q86YV0 1011 aa12.26□□□□□ -0.45
PROM1-213ENST00000512304 ZNF34Q8IZ26 560 aa12.26□□□□□ -0.45
PROM1-213ENST00000512304 C2orf69Q8N8R5 385 aa12.26□□□□□ -0.45
PROM1-213ENST00000512304 THUMPD2Q9BTF0 503 aaKnown RBP12.26□□□□□ -0.45
PROM1-213ENST00000512304 RSPH6AQ9H0K4 717 aa12.26□□□□□ -0.45
PROM1-213ENST00000512304 DBNDD1Q9H9R9 158 aa12.26□□□□□ -0.45
PROM1-213ENST00000512304 POTEFA5A3E0 1075 aa12.25□□□□□ -0.45
PROM1-213ENST00000512304 H7C1D1 291 aa12.25□□□□□ -0.45
PROM1-213ENST00000512304 RIMBP2O15034 1052 aa12.25□□□□□ -0.45
PROM1-213ENST00000512304 FXR1P51114 621 aaKnown RBP eCLIP12.25□□□□□ -0.45
PROM1-213ENST00000512304 MKRN3Q13064 507 aaKnown RBP12.25□□□□□ -0.45
PROM1-213ENST00000512304 DOK7Q18PE1 504 aa12.25□□□□□ -0.45
PROM1-213ENST00000512304 PRAMEF18Q5VWM3 479 aa12.25□□□□□ -0.45
PROM1-213ENST00000512304 MPNDQ8N594 471 aa12.25□□□□□ -0.45
PROM1-213ENST00000512304 CCDC102AQ96A19 550 aa12.25□□□□□ -0.45
PROM1-213ENST00000512304 CDCA5Q96FF9 252 aa12.25□□□□□ -0.45
PROM1-213ENST00000512304 HTTP42858 3142 aa12.25□□□□□ -0.45
PROM1-213ENST00000512304 ERVV-1B6SEH8 477 aa12.24□□□□□ -0.45
PROM1-213ENST00000512304 PER1O15534 1290 aaPredicted RBP12.24□□□□□ -0.45
PROM1-213ENST00000512304 ANXA1P04083 346 aa12.24□□□□□ -0.45
PROM1-213ENST00000512304 FXR2P51116 673 aaKnown RBP eCLIP12.24□□□□□ -0.45
PROM1-213ENST00000512304 EIF4G2P78344 907 aaKnown RBP eCLIP12.24□□□□□ -0.45
PROM1-213ENST00000512304 TNIP1Q15025 636 aa12.24□□□□□ -0.45
PROM1-213ENST00000512304 RTL9Q8NET4 1388 aa12.24□□□□□ -0.45
PROM1-213ENST00000512304 GGA3Q9NZ52 723 aa12.24□□□□□ -0.45
PROM1-213ENST00000512304 UBE2Q2LH0YL09 131 aa12.23□□□□□ -0.45
PROM1-213ENST00000512304 RGL2O15211 777 aa12.23□□□□□ -0.45
PROM1-213ENST00000512304 SPDYE1Q8NFV5 336 aaPredicted RBP12.23□□□□□ -0.45
PROM1-213ENST00000512304 SZT2Q5T011 3432 aa12.23□□□□□ -0.45
PROM1-213ENST00000512304 DUOX1Q9NRD9 1551 aa12.22□□□□□ -0.45
PROM1-213ENST00000512304 PROSER3Q2NL68 480 aa12.22□□□□□ -0.45
PROM1-213ENST00000512304 SP8Q8IXZ3 490 aa12.22□□□□□ -0.45
PROM1-213ENST00000512304 SP7Q8TDD2 431 aaPredicted RBP12.22□□□□□ -0.45
PROM1-213ENST00000512304 NLRP3Q96P20 1036 aa12.22□□□□□ -0.45
PROM1-213ENST00000512304 HDAC9Q9UKV0 1011 aa12.22□□□□□ -0.45
PROM1-213ENST00000512304 COL4A1P02462 1669 aa12.22□□□□□ -0.45
PROM1-213ENST00000512304 CDHR2Q9BYE9 1310 aa12.21□□□□□ -0.45
PROM1-213ENST00000512304 GRIPAP1Q4V328 841 aa12.21□□□□□ -0.45
PROM1-213ENST00000512304 KIF6Q6ZMV9 814 aa12.21□□□□□ -0.45
PROM1-213ENST00000512304 SUPT20HQ8NEM7 779 aa12.21□□□□□ -0.45
PROM1-213ENST00000512304 DCPSQ96C86 337 aaKnown RBP12.21□□□□□ -0.45
PROM1-213ENST00000512304 POLLQ9UGP5 575 aa12.21□□□□□ -0.45
PROM1-213ENST00000512304 GPR25O00155 361 aa12.2□□□□□ -0.46
PROM1-213ENST00000512304 KIF4BQ2VIQ3 1234 aa12.2□□□□□ -0.46
PROM1-213ENST00000512304 SLC10A5Q5PT55 438 aa12.2□□□□□ -0.46
PROM1-213ENST00000512304 GIGYF2Q6Y7W6 1299 aaKnown RBP12.2□□□□□ -0.46
PROM1-213ENST00000512304 LRP10Q7Z4F1 713 aa12.2□□□□□ -0.46
PROM1-213ENST00000512304 VPS33BQ9H267 617 aa12.2□□□□□ -0.46
PROM1-213ENST00000512304 IBTKQ9P2D0 1353 aaPredicted RBP12.19□□□□□ -0.46
PROM1-213ENST00000512304 BBOX1O75936 387 aa12.19□□□□□ -0.46
PROM1-213ENST00000512304 EIF4A1P60842 406 aaKnown RBP12.19□□□□□ -0.46
PROM1-213ENST00000512304 GPSM2P81274 684 aa12.19□□□□□ -0.46
PROM1-213ENST00000512304 CAP1Q01518 475 aa12.19□□□□□ -0.46
PROM1-213ENST00000512304 TAF7Q15545 349 aaPredicted RBP12.19□□□□□ -0.46
PROM1-213ENST00000512304 ANGEL2Q5VTE6 544 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms