RNA–Protein interactions for RNA: ENST00000512258.1

MSH3-202, Transcript of mutS homolog 3, humanhuman

TSL 3

Gene MSH3, Length 677 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-202ENST00000512258 ZCCHC11Q5TAX3 1644 aaKnown RBP8.01□□□□□ -1.13
MSH3-202ENST00000512258 BACH1O14867 736 aa8.01□□□□□ -1.13
MSH3-202ENST00000512258 RAC1P63000 192 aa8.01□□□□□ -1.13
MSH3-202ENST00000512258 TYRO3Q06418 890 aa8.01□□□□□ -1.13
MSH3-202ENST00000512258 POTEAQ6S8J7 498 aa8.01□□□□□ -1.13
MSH3-202ENST00000512258 NUDT8Q8WV74 236 aa8.01□□□□□ -1.13
MSH3-202ENST00000512258 JPH1Q9HDC5 661 aaPredicted RBP8.01□□□□□ -1.13
MSH3-202ENST00000512258 NAGPAQ9UK23 515 aa8.01□□□□□ -1.13
MSH3-202ENST00000512258 KDM5BQ9UGL1 1544 aa8.01□□□□□ -1.13
MSH3-202ENST00000512258 MAGI3Q5TCQ9 1506 aa8□□□□□ -1.13
MSH3-202ENST00000512258 RHPN1Q8TCX5 695 aa8□□□□□ -1.13
MSH3-202ENST00000512258 KCNH4Q9UQ05 1017 aa8□□□□□ -1.13
MSH3-202ENST00000512258 NEUROD1Q13562 356 aa7.99□□□□□ -1.13
MSH3-202ENST00000512258 KANK4Q5T7N3 995 aaPredicted RBP7.99□□□□□ -1.13
MSH3-202ENST00000512258 ZNF280CQ8ND82 737 aa7.99□□□□□ -1.13
MSH3-202ENST00000512258 WFDC12Q8WWY7 111 aa7.99□□□□□ -1.13
MSH3-202ENST00000512258 BHMTQ93088 406 aa7.99□□□□□ -1.13
MSH3-202ENST00000512258 CEP63Q96MT8 703 aa7.99□□□□□ -1.13
MSH3-202ENST00000512258 USP21Q9UK80 565 aa7.99□□□□□ -1.13
MSH3-202ENST00000512258 TIAM1Q13009 1591 aa7.98□□□□□ -1.13
MSH3-202ENST00000512258 NOS3P29474 1203 aa7.98□□□□□ -1.13
MSH3-202ENST00000512258 DMRTC2Q8IXT2 367 aaPredicted RBP7.98□□□□□ -1.13
MSH3-202ENST00000512258 TNS4Q8IZW8 715 aa7.98□□□□□ -1.13
MSH3-202ENST00000512258 MEGF10Q96KG7 1140 aa7.98□□□□□ -1.13
MSH3-202ENST00000512258 NEUROD4Q9HD90 331 aa7.98□□□□□ -1.13
MSH3-202ENST00000512258 ZNF232Q9UNY5 417 aa7.98□□□□□ -1.13
MSH3-202ENST00000512258 CFAP43Q8NDM7 1665 aa7.98□□□□□ -1.13
MSH3-202ENST00000512258 SERTM1A2A2V5 107 aa7.97□□□□□ -1.13
MSH3-202ENST00000512258 GTF2IP78347 998 aa7.97□□□□□ -1.13
MSH3-202ENST00000512258 UBE2OQ9C0C9 1292 aaKnown RBP7.97□□□□□ -1.13
MSH3-202ENST00000512258 CCDC18Q5T9S5 1454 aa7.97□□□□□ -1.13
MSH3-202ENST00000512258 ASXL2Q76L83 1435 aa7.96□□□□□ -1.13
MSH3-202ENST00000512258 SFI1A8K8P3 1242 aa7.96□□□□□ -1.14
MSH3-202ENST00000512258 IREB2P48200 963 aaKnown RBP7.96□□□□□ -1.14
MSH3-202ENST00000512258 HIRAP54198 1017 aaPredicted RBP7.96□□□□□ -1.14
MSH3-202ENST00000512258 GRIK5Q16478 980 aa7.96□□□□□ -1.14
MSH3-202ENST00000512258 C1orf53Q5VUE5 145 aa7.96□□□□□ -1.14
MSH3-202ENST00000512258 PSAPL1Q6NUJ1 521 aa7.96□□□□□ -1.14
MSH3-202ENST00000512258 NEUROD2Q15784 382 aa7.95□□□□□ -1.14
MSH3-202ENST00000512258 PRR23CQ6ZRP0 262 aa7.95□□□□□ -1.14
MSH3-202ENST00000512258 SUSD3Q96L08 255 aa7.95□□□□□ -1.14
MSH3-202ENST00000512258 LRRC9Q6ZRR7 1453 aa7.94□□□□□ -1.14
MSH3-202ENST00000512258 MAPKBP1O60336 1514 aa7.94□□□□□ -1.14
MSH3-202ENST00000512258 MAP3K1Q13233 1512 aa7.94□□□□□ -1.14
MSH3-202ENST00000512258 KIF14Q15058 1648 aa7.94□□□□□ -1.14
MSH3-202ENST00000512258 PAX4O43316 350 aa7.94□□□□□ -1.14
MSH3-202ENST00000512258 TBC1D8BQ0IIM8 1120 aa7.94□□□□□ -1.14
MSH3-202ENST00000512258 EML3Q32P44 896 aa7.94□□□□□ -1.14
MSH3-202ENST00000512258 FBXO11Q86XK2 927 aa7.94□□□□□ -1.14
MSH3-202ENST00000512258 PHACTR1Q9C0D0 580 aa7.94□□□□□ -1.14
MSH3-202ENST00000512258 GDPD2Q9HCC8 539 aa7.94□□□□□ -1.14
MSH3-202ENST00000512258 DNAJB12Q9NXW2 375 aaKnown RBP7.94□□□□□ -1.14
MSH3-202ENST00000512258 TROQ12816 1431 aaPredicted RBP7.94□□□□□ -1.14
MSH3-202ENST00000512258 WDR7Q9Y4E6 1490 aa7.94□□□□□ -1.14
MSH3-202ENST00000512258 ARID1BQ8NFD5 2236 aaPredicted RBP7.93□□□□□ -1.14
MSH3-202ENST00000512258 PLEKHD1A6NEE1 506 aa7.93□□□□□ -1.14
MSH3-202ENST00000512258 TXKP42681 527 aa7.93□□□□□ -1.14
MSH3-202ENST00000512258 PCMTD2Q9NV79 361 aa7.93□□□□□ -1.14
MSH3-202ENST00000512258 NOD1Q9Y239 953 aa7.93□□□□□ -1.14
MSH3-202ENST00000512258 HCN4Q9Y3Q4 1203 aa7.93□□□□□ -1.14
MSH3-202ENST00000512258 MTUS2Q5JR59 1369 aa7.93□□□□□ -1.14
MSH3-202ENST00000512258 CD97P48960 835 aa7.92□□□□□ -1.14
MSH3-202ENST00000512258 PSMA6P60900 246 aaKnown RBP7.92□□□□□ -1.14
MSH3-202ENST00000512258 PLAURQ03405 335 aa7.92□□□□□ -1.14
MSH3-202ENST00000512258 SEMA3FQ13275 785 aa7.92□□□□□ -1.14
MSH3-202ENST00000512258 MSL1Q68DK7 614 aa7.92□□□□□ -1.14
MSH3-202ENST00000512258 DTWD1Q8N5C7 304 aa7.92□□□□□ -1.14
MSH3-202ENST00000512258 TSPAN10Q9H1Z9 355 aaPredicted RBP7.92□□□□□ -1.14
MSH3-202ENST00000512258 IGFLR1Q9H665 355 aa7.92□□□□□ -1.14
MSH3-202ENST00000512258 ANKIB1Q9P2G1 1089 aa7.92□□□□□ -1.14
MSH3-202ENST00000512258 EHBP1L1Q8N3D4 1523 aa7.92□□□□□ -1.14
MSH3-202ENST00000512258 NCOA4Q13772 614 aa7.91□□□□□ -1.14
MSH3-202ENST00000512258 GSX2Q9BZM3 304 aa7.91□□□□□ -1.14
MSH3-202ENST00000512258 CDK11AQ9UQ88 783 aaPredicted RBP7.91□□□□□ -1.14
MSH3-202ENST00000512258 TTC37Q6PGP7 1564 aa7.9□□□□□ -1.14
MSH3-202ENST00000512258 DIP2BQ9P265 1576 aa7.9□□□□□ -1.14
MSH3-202ENST00000512258 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.9□□□□□ -1.14
MSH3-202ENST00000512258 ABCC10Q5T3U5 1492 aa7.9□□□□□ -1.14
MSH3-202ENST00000512258 ZBTB7BO15156 539 aaPredicted RBP7.9□□□□□ -1.14
MSH3-202ENST00000512258 COBLO75128 1261 aa7.9□□□□□ -1.14
MSH3-202ENST00000512258 RGS9O75916 674 aaPredicted RBP7.9□□□□□ -1.14
MSH3-202ENST00000512258 MED26O95402 600 aa7.9□□□□□ -1.14
MSH3-202ENST00000512258 YBX3P16989 372 aaKnown RBP eCLIP7.9□□□□□ -1.14
MSH3-202ENST00000512258 SSTR4P31391 388 aa7.9□□□□□ -1.14
MSH3-202ENST00000512258 SOX11P35716 441 aa7.9□□□□□ -1.14
MSH3-202ENST00000512258 PSME1Q06323 249 aa7.9□□□□□ -1.14
MSH3-202ENST00000512258 WASHC4Q2M389 1173 aa7.9□□□□□ -1.14
MSH3-202ENST00000512258 BTLAQ7Z6A9 289 aa7.9□□□□□ -1.14
MSH3-202ENST00000512258 LPIN3Q9BQK8 851 aa7.9□□□□□ -1.14
MSH3-202ENST00000512258 PRM3Q9NNZ6 103 aa7.9□□□□□ -1.14
MSH3-202ENST00000512258 KIAA1024Q9UPX6 916 aa7.9□□□□□ -1.14
MSH3-202ENST00000512258 NCOA2Q15596 1464 aa7.89□□□□□ -1.15
MSH3-202ENST00000512258 LZTS3O60299 673 aaPredicted RBP7.89□□□□□ -1.15
MSH3-202ENST00000512258 DEAF1O75398 565 aaPredicted RBP7.89□□□□□ -1.15
MSH3-202ENST00000512258 SKIP12755 728 aa7.89□□□□□ -1.15
MSH3-202ENST00000512258 FSTP19883 344 aa7.89□□□□□ -1.15
MSH3-202ENST00000512258 GRNP28799 593 aaKnown RBP7.89□□□□□ -1.15
MSH3-202ENST00000512258 FAM69CQ0P6D2 419 aa7.89□□□□□ -1.15
MSH3-202ENST00000512258 DZIP1LQ8IYY4 767 aaKnown RBP7.89□□□□□ -1.15
MSH3-202ENST00000512258 EFCC1Q9HA90 598 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms