RNA–Protein interactions for RNA: ENST00000511769.5

PTPN20-225, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-225ENST00000511769 TSPYL4Q9UJ04 414 aa12.68□□□□□ -0.38
PTPN20-225ENST00000511769 NEFLP07196 543 aa12.67□□□□□ -0.38
PTPN20-225ENST00000511769 SRGNP10124 158 aa12.67□□□□□ -0.38
PTPN20-225ENST00000511769 EXOSC9Q06265 439 aaKnown RBP12.67□□□□□ -0.38
PTPN20-225ENST00000511769 RGMBQ6NW40 437 aa12.67□□□□□ -0.38
PTPN20-225ENST00000511769 FBXO46Q6PJ61 603 aaPredicted RBP12.67□□□□□ -0.38
PTPN20-225ENST00000511769 OLFM4Q6UX06 510 aa12.67□□□□□ -0.38
PTPN20-225ENST00000511769 JDP2Q8WYK2 163 aa12.67□□□□□ -0.38
PTPN20-225ENST00000511769 MASTLQ96GX5 879 aa12.67□□□□□ -0.38
PTPN20-225ENST00000511769 MBIPQ9NS73 344 aa12.67□□□□□ -0.38
PTPN20-225ENST00000511769 A0A0C4DFX4 3053 aa12.67□□□□□ -0.38
PTPN20-225ENST00000511769 NPHP1O15259 732 aa12.66□□□□□ -0.38
PTPN20-225ENST00000511769 DNAJC10Q8IXB1 793 aa12.66□□□□□ -0.38
PTPN20-225ENST00000511769 C7orf43Q8WVR3 580 aa12.66□□□□□ -0.38
PTPN20-225ENST00000511769 BTBD11A6QL63 1104 aa12.65□□□□□ -0.38
PTPN20-225ENST00000511769 TBC1D9BQ66K14 1250 aa12.65□□□□□ -0.38
PTPN20-225ENST00000511769 MIS18AQ9NYP9 233 aa12.65□□□□□ -0.38
PTPN20-225ENST00000511769 CEMIPQ8WUJ3 1361 aa12.65□□□□□ -0.38
PTPN20-225ENST00000511769 COL6A3P12111 3177 aa12.65□□□□□ -0.38
PTPN20-225ENST00000511769 AKAP11Q9UKA4 1901 aa12.64□□□□□ -0.39
PTPN20-225ENST00000511769 RTKN2Q8IZC4 609 aa12.64□□□□□ -0.39
PTPN20-225ENST00000511769 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.64□□□□□ -0.39
PTPN20-225ENST00000511769 ZNF296Q8WUU4 475 aaPredicted RBP12.64□□□□□ -0.39
PTPN20-225ENST00000511769 CCDC102AQ96A19 550 aa12.64□□□□□ -0.39
PTPN20-225ENST00000511769 COL25A1Q9BXS0 654 aaPredicted RBP12.64□□□□□ -0.39
PTPN20-225ENST00000511769 ADARB2Q9NS39 739 aaKnown RBP12.64□□□□□ -0.39
PTPN20-225ENST00000511769 ZNF157P51786 506 aaPredicted RBP12.63□□□□□ -0.39
PTPN20-225ENST00000511769 ZNF428Q96B54 188 aa12.63□□□□□ -0.39
PTPN20-225ENST00000511769 OTUD5Q96G74 571 aa12.63□□□□□ -0.39
PTPN20-225ENST00000511769 CSRNP1Q96S65 589 aa12.63□□□□□ -0.39
PTPN20-225ENST00000511769 ZBTB1Q9Y2K1 713 aa12.63□□□□□ -0.39
PTPN20-225ENST00000511769 ST5P78524 1137 aa12.62□□□□□ -0.39
PTPN20-225ENST00000511769 TWISTNBQ3B726 338 aaPredicted RBP12.62□□□□□ -0.39
PTPN20-225ENST00000511769 CNBD1Q8NA66 436 aa12.62□□□□□ -0.39
PTPN20-225ENST00000511769 NFATC2IPQ8NCF5 419 aa12.62□□□□□ -0.39
PTPN20-225ENST00000511769 SPDYE1Q8NFV5 336 aaPredicted RBP12.62□□□□□ -0.39
PTPN20-225ENST00000511769 SLC52A2Q9HAB3 445 aa12.62□□□□□ -0.39
PTPN20-225ENST00000511769 SSUH2Q9Y2M2 353 aa12.62□□□□□ -0.39
PTPN20-225ENST00000511769 COL4A5P29400 1685 aa12.62□□□□□ -0.39
PTPN20-225ENST00000511769 H0YGN5 161 aa12.62□□□□□ -0.39
PTPN20-225ENST00000511769 ELL2O00472 640 aaPredicted RBP12.62□□□□□ -0.39
PTPN20-225ENST00000511769 MPNDQ8N594 471 aa12.62□□□□□ -0.39
PTPN20-225ENST00000511769 PAPPA2Q9BXP8 1791 aa12.61□□□□□ -0.39
PTPN20-225ENST00000511769 VAMP4O75379 141 aa12.61□□□□□ -0.39
PTPN20-225ENST00000511769 CYP19A1P11511 503 aaPredicted RBP12.61□□□□□ -0.39
PTPN20-225ENST00000511769 CANXP27824 592 aaKnown RBP12.61□□□□□ -0.39
PTPN20-225ENST00000511769 RARSP54136 660 aaKnown RBP12.61□□□□□ -0.39
PTPN20-225ENST00000511769 RRP1P56182 461 aaKnown RBP12.61□□□□□ -0.39
PTPN20-225ENST00000511769 CDC37L1Q7L3B6 337 aa12.61□□□□□ -0.39
PTPN20-225ENST00000511769 C8orf58Q8NAV2 365 aa12.61□□□□□ -0.39
PTPN20-225ENST00000511769 CHMP4AQ9BY43 222 aa12.61□□□□□ -0.39
PTPN20-225ENST00000511769 GPRC5DQ9NZD1 345 aa12.61□□□□□ -0.39
PTPN20-225ENST00000511769 GTF3C3Q9Y5Q9 886 aa12.61□□□□□ -0.39
PTPN20-225ENST00000511769 TBC1D8O95759 1140 aa12.6□□□□□ -0.39
PTPN20-225ENST00000511769 SLC10A3P09131 477 aa12.6□□□□□ -0.39
PTPN20-225ENST00000511769 EN2P19622 333 aaPredicted RBP12.6□□□□□ -0.39
PTPN20-225ENST00000511769 ALDH1L2Q3SY69 923 aa12.6□□□□□ -0.39
PTPN20-225ENST00000511769 DLK2Q6UY11 383 aa12.6□□□□□ -0.39
PTPN20-225ENST00000511769 TTC5Q8N0Z6 440 aa12.6□□□□□ -0.39
PTPN20-225ENST00000511769 RBM27Q9P2N5 1060 aaKnown RBP12.6□□□□□ -0.39
PTPN20-225ENST00000511769 BCAR3O75815 825 aa12.59□□□□□ -0.39
PTPN20-225ENST00000511769 INTS3Q68E01 1043 aaKnown RBP12.59□□□□□ -0.39
PTPN20-225ENST00000511769 USP48Q86UV5 1035 aa12.59□□□□□ -0.39
PTPN20-225ENST00000511769 TSPYL6Q8N831 410 aa12.59□□□□□ -0.39
PTPN20-225ENST00000511769 GBA2Q9HCG7 927 aaPredicted RBP12.59□□□□□ -0.39
PTPN20-225ENST00000511769 SMC4Q9NTJ3 1288 aa12.59□□□□□ -0.39
PTPN20-225ENST00000511769 NPR1P16066 1061 aa12.58□□□□□ -0.4
PTPN20-225ENST00000511769 EIF4A1P60842 406 aaKnown RBP12.58□□□□□ -0.4
PTPN20-225ENST00000511769 ZNF790Q6PG37 636 aa12.58□□□□□ -0.4
PTPN20-225ENST00000511769 C2orf69Q8N8R5 385 aa12.58□□□□□ -0.4
PTPN20-225ENST00000511769 PGAP2Q9UHJ9 254 aa12.58□□□□□ -0.4
PTPN20-225ENST00000511769 LARGE2Q8N3Y3 721 aa12.57□□□□□ -0.4
PTPN20-225ENST00000511769 SSH1Q8WYL5 1049 aa12.57□□□□□ -0.4
PTPN20-225ENST00000511769 FRAT1Q92837 279 aaPredicted RBP12.57□□□□□ -0.4
PTPN20-225ENST00000511769 PSMD1Q99460 953 aa12.57□□□□□ -0.4
PTPN20-225ENST00000511769 CUL9Q8IWT3 2517 aa12.57□□□□□ -0.4
PTPN20-225ENST00000511769 SCN7AQ01118 1682 aa12.56□□□□□ -0.4
PTPN20-225ENST00000511769 RBBP6Q7Z6E9 1792 aaKnown RBP12.56□□□□□ -0.4
PTPN20-225ENST00000511769 GPR25O00155 361 aa12.56□□□□□ -0.4
PTPN20-225ENST00000511769 IPO8O15397 1037 aaKnown RBP12.56□□□□□ -0.4
PTPN20-225ENST00000511769 KCNQ3O43525 872 aa12.56□□□□□ -0.4
PTPN20-225ENST00000511769 PLIN1O60240 522 aa12.56□□□□□ -0.4
PTPN20-225ENST00000511769 HOXB7P09629 217 aa12.56□□□□□ -0.4
PTPN20-225ENST00000511769 MS4A1P11836 297 aa12.56□□□□□ -0.4
PTPN20-225ENST00000511769 HIRAP54198 1017 aaPredicted RBP12.56□□□□□ -0.4
PTPN20-225ENST00000511769 IRX6P78412 446 aaPredicted RBP12.56□□□□□ -0.4
PTPN20-225ENST00000511769 SLC39A6Q13433 755 aa12.56□□□□□ -0.4
PTPN20-225ENST00000511769 KRT24Q2M2I5 525 aa12.56□□□□□ -0.4
PTPN20-225ENST00000511769 CCDC30Q5VVM6 783 aa12.56□□□□□ -0.4
PTPN20-225ENST00000511769 ZC3H15Q8WU90 426 aaKnown RBP12.56□□□□□ -0.4
PTPN20-225ENST00000511769 SETDB2Q96T68 719 aa12.56□□□□□ -0.4
PTPN20-225ENST00000511769 BCL2L13Q9BXK5 485 aa12.56□□□□□ -0.4
PTPN20-225ENST00000511769 A0A087WZG4 1122 aa12.55□□□□□ -0.4
PTPN20-225ENST00000511769 PRKAR2AP13861 404 aaKnown RBP12.55□□□□□ -0.4
PTPN20-225ENST00000511769 NIM1KQ8IY84 436 aa12.55□□□□□ -0.4
PTPN20-225ENST00000511769 TRPM4Q8TD43 1214 aa12.55□□□□□ -0.4
PTPN20-225ENST00000511769 FMNL2Q96PY5 1086 aa12.55□□□□□ -0.4
PTPN20-225ENST00000511769 STK31Q9BXU1 1019 aa12.55□□□□□ -0.4
PTPN20-225ENST00000511769 PRDM6Q9NQX0 595 aa12.55□□□□□ -0.4
PTPN20-225ENST00000511769 SIPA1L3O60292 1781 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms