RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 FXR1P51114 621 aaKnown RBP eCLIP16.11■□□□□ 0.17
COPS4-210ENST00000511708 SAMD7Q7Z3H4 446 aa16.11■□□□□ 0.17
COPS4-210ENST00000511708 KIAA0100Q14667 2235 aaKnown RBP16.1■□□□□ 0.17
COPS4-210ENST00000511708 ADM5C9JUS6 153 aa16.1■□□□□ 0.17
COPS4-210ENST00000511708 EGFRP00533 1210 aa16.1■□□□□ 0.17
COPS4-210ENST00000511708 DPP8Q6V1X1 898 aaPredicted RBP16.1■□□□□ 0.17
COPS4-210ENST00000511708 ZNF34Q8IZ26 560 aa16.1■□□□□ 0.17
COPS4-210ENST00000511708 ZNF296Q8WUU4 475 aaPredicted RBP16.1■□□□□ 0.17
COPS4-210ENST00000511708 PHACTR3Q96KR7 559 aa16.1■□□□□ 0.17
COPS4-210ENST00000511708 TMX4Q9H1E5 349 aaPredicted RBP16.1■□□□□ 0.17
COPS4-210ENST00000511708 ABCC4O15439 1325 aa16.1■□□□□ 0.17
COPS4-210ENST00000511708 LRRC37AA6NMS7 1700 aa16.09■□□□□ 0.17
COPS4-210ENST00000511708 RBBP6Q7Z6E9 1792 aaKnown RBP16.09■□□□□ 0.17
COPS4-210ENST00000511708 GPTP24298 496 aa16.09■□□□□ 0.17
COPS4-210ENST00000511708 FBXO46Q6PJ61 603 aaPredicted RBP16.09■□□□□ 0.17
COPS4-210ENST00000511708 RASAL3Q86YV0 1011 aa16.09■□□□□ 0.17
COPS4-210ENST00000511708 SP8Q8IXZ3 490 aa16.09■□□□□ 0.17
COPS4-210ENST00000511708 MPNDQ8N594 471 aa16.09■□□□□ 0.17
COPS4-210ENST00000511708 ZBTB12Q9Y330 459 aaPredicted RBP16.09■□□□□ 0.17
COPS4-210ENST00000511708 TAF1P21675 1872 aa16.09■□□□□ 0.17
COPS4-210ENST00000511708 CENPFP49454 3210 aa16.09■□□□□ 0.17
COPS4-210ENST00000511708 U2SURPO15042 1029 aaKnown RBP16.08■□□□□ 0.16
COPS4-210ENST00000511708 HSPA5P11021 654 aaKnown RBP16.08■□□□□ 0.16
COPS4-210ENST00000511708 TBC1D10BQ4KMP7 808 aaPredicted RBP16.08■□□□□ 0.16
COPS4-210ENST00000511708 NOM1Q5C9Z4 860 aaKnown RBP16.08■□□□□ 0.16
COPS4-210ENST00000511708 TTLL7Q6ZT98 887 aa16.08■□□□□ 0.16
COPS4-210ENST00000511708 DCPSQ96C86 337 aaKnown RBP16.08■□□□□ 0.16
COPS4-210ENST00000511708 NLRP3Q96P20 1036 aa16.08■□□□□ 0.16
COPS4-210ENST00000511708 HDAC9Q9UKV0 1011 aa16.08■□□□□ 0.16
COPS4-210ENST00000511708 BBOX1O75936 387 aa16.07■□□□□ 0.16
COPS4-210ENST00000511708 SLC10A5Q5PT55 438 aa16.07■□□□□ 0.16
COPS4-210ENST00000511708 TIMELESSQ9UNS1 1208 aa16.07■□□□□ 0.16
COPS4-210ENST00000511708 PAPPA2Q9BXP8 1791 aa16.07■□□□□ 0.16
COPS4-210ENST00000511708 SZT2Q5T011 3432 aa16.06■□□□□ 0.16
COPS4-210ENST00000511708 CEP290O15078 2479 aa16.06■□□□□ 0.16
COPS4-210ENST00000511708 DDX60Q8IY21 1712 aaKnown RBP16.06■□□□□ 0.16
COPS4-210ENST00000511708 PSMD14O00487 310 aa16.06■□□□□ 0.16
COPS4-210ENST00000511708 EIF4G2P78344 907 aaKnown RBP eCLIP16.06■□□□□ 0.16
COPS4-210ENST00000511708 NGEFQ8N5V2 710 aa16.06■□□□□ 0.16
COPS4-210ENST00000511708 TRIOBPQ9H2D6 2365 aa16.06■□□□□ 0.16
COPS4-210ENST00000511708 KDM3BQ7LBC6 1761 aa16.05■□□□□ 0.16
COPS4-210ENST00000511708 BRCA2P51587 3418 aa16.05■□□□□ 0.16
COPS4-210ENST00000511708 KIF6Q6ZMV9 814 aa16.05■□□□□ 0.16
COPS4-210ENST00000511708 MCM10Q7L590 875 aa16.05■□□□□ 0.16
COPS4-210ENST00000511708 RSPH6AQ9H0K4 717 aa16.05■□□□□ 0.16
COPS4-210ENST00000511708 SCN9AQ15858 1988 aa16.05■□□□□ 0.16
COPS4-210ENST00000511708 GPR25O00155 361 aa16.04■□□□□ 0.16
COPS4-210ENST00000511708 TBC1D8O95759 1140 aa16.04■□□□□ 0.16
COPS4-210ENST00000511708 RPS12P25398 132 aaKnown RBP16.04■□□□□ 0.16
COPS4-210ENST00000511708 PRKAR2BP31323 418 aa16.04■□□□□ 0.16
COPS4-210ENST00000511708 GIGYF2Q6Y7W6 1299 aaKnown RBP16.04■□□□□ 0.16
COPS4-210ENST00000511708 PPP1R42Q7Z4L9 355 aa16.04■□□□□ 0.16
COPS4-210ENST00000511708 CDCA5Q96FF9 252 aa16.04■□□□□ 0.16
COPS4-210ENST00000511708 ZBTB3Q9H5J0 574 aa16.04■□□□□ 0.16
COPS4-210ENST00000511708 PARP10Q53GL7 1025 aa16.03■□□□□ 0.16
COPS4-210ENST00000511708 SULF1Q8IWU6 871 aa16.03■□□□□ 0.16
COPS4-210ENST00000511708 GGA3Q9NZ52 723 aa16.03■□□□□ 0.16
COPS4-210ENST00000511708 PER1O15534 1290 aaPredicted RBP16.02■□□□□ 0.16
COPS4-210ENST00000511708 FKBP1BP68106 108 aa16.02■□□□□ 0.16
COPS4-210ENST00000511708 RBM26Q5T8P6 1007 aaKnown RBP16.02■□□□□ 0.16
COPS4-210ENST00000511708 RTL9Q8NET4 1388 aa16.01■□□□□ 0.15
COPS4-210ENST00000511708 ASTN2O75129 1339 aaPredicted RBP16.01■□□□□ 0.15
COPS4-210ENST00000511708 POTEFA5A3E0 1075 aa16.01■□□□□ 0.15
COPS4-210ENST00000511708 TM4SF4P48230 202 aa16.01■□□□□ 0.15
COPS4-210ENST00000511708 DCTN1Q14203 1278 aa16.01■□□□□ 0.15
COPS4-210ENST00000511708 KIF4BQ2VIQ3 1234 aa16.01■□□□□ 0.15
COPS4-210ENST00000511708 RTF1Q92541 710 aaKnown RBP16.01■□□□□ 0.15
COPS4-210ENST00000511708 CFHR5Q9BXR6 569 aa16.01■□□□□ 0.15
COPS4-210ENST00000511708 RRP7AQ9Y3A4 280 aaKnown RBP16.01■□□□□ 0.15
COPS4-210ENST00000511708 HTATSF1O43719 755 aaKnown RBP16■□□□□ 0.15
COPS4-210ENST00000511708 GRAPQ13588 217 aa16■□□□□ 0.15
COPS4-210ENST00000511708 TAF7Q15545 349 aaPredicted RBP16■□□□□ 0.15
COPS4-210ENST00000511708 CC2D1BQ5T0F9 858 aaKnown RBP16■□□□□ 0.15
COPS4-210ENST00000511708 GRAPLQ8TC17 118 aaPredicted RBP16■□□□□ 0.15
COPS4-210ENST00000511708 UTP14AQ9BVJ6 771 aaKnown RBP16■□□□□ 0.15
COPS4-210ENST00000511708 DBNDD1Q9H9R9 158 aa16■□□□□ 0.15
COPS4-210ENST00000511708 PSME4Q14997 1843 aa16■□□□□ 0.15
COPS4-210ENST00000511708 CUL9Q8IWT3 2517 aa16■□□□□ 0.15
COPS4-210ENST00000511708 A0A0C4DFX4 3053 aa16■□□□□ 0.15
COPS4-210ENST00000511708 MYL6BP14649 208 aa15.99■□□□□ 0.15
COPS4-210ENST00000511708 TMC4Q7Z404 712 aa15.99■□□□□ 0.15
COPS4-210ENST00000511708 KCNQ5Q9NR82 932 aa15.99■□□□□ 0.15
COPS4-210ENST00000511708 DLG5Q8TDM6 1919 aa15.98■□□□□ 0.15
COPS4-210ENST00000511708 ZNF609O15014 1411 aa15.98■□□□□ 0.15
COPS4-210ENST00000511708 FKTNO75072 461 aa15.98■□□□□ 0.15
COPS4-210ENST00000511708 WASHC4Q2M389 1173 aa15.98■□□□□ 0.15
COPS4-210ENST00000511708 INTS3Q68E01 1043 aaKnown RBP15.98■□□□□ 0.15
COPS4-210ENST00000511708 DDX46Q7L014 1031 aaKnown RBP15.98■□□□□ 0.15
COPS4-210ENST00000511708 MIS18AQ9NYP9 233 aa15.98■□□□□ 0.15
COPS4-210ENST00000511708 LRP10Q7Z4F1 713 aa15.97■□□□□ 0.15
COPS4-210ENST00000511708 R3HDMLQ9H3Y0 253 aa15.97■□□□□ 0.15
COPS4-210ENST00000511708 ERBB4Q15303 1308 aa15.96■□□□□ 0.15
COPS4-210ENST00000511708 ECE2O60344 883 aa15.96■□□□□ 0.15
COPS4-210ENST00000511708 VIL1P09327 827 aaKnown RBP15.96■□□□□ 0.15
COPS4-210ENST00000511708 HCLS1P14317 486 aaPredicted RBP15.96■□□□□ 0.15
COPS4-210ENST00000511708 EIF4A1P60842 406 aaKnown RBP15.96■□□□□ 0.15
COPS4-210ENST00000511708 ANGEL2Q5VTE6 544 aaKnown RBP15.96■□□□□ 0.15
COPS4-210ENST00000511708 MOB2Q70IA6 237 aa15.96■□□□□ 0.15
COPS4-210ENST00000511708 COLQQ9Y215 455 aaPredicted RBP15.96■□□□□ 0.15
COPS4-210ENST00000511708 ZNF280AP59817 542 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms