RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 TFCP2L1Q9NZI6 479 aa9.32□□□□□ -0.92
COPS4-209ENST00000511653 MAP2P11137 1827 aaKnown RBP9.31□□□□□ -0.92
COPS4-209ENST00000511653 POLD1P28340 1107 aa9.31□□□□□ -0.92
COPS4-209ENST00000511653 VAC14Q08AM6 782 aa9.31□□□□□ -0.92
COPS4-209ENST00000511653 GPR162Q16538 588 aa9.31□□□□□ -0.92
COPS4-209ENST00000511653 CCNL1Q9UK58 526 aaPredicted RBP9.31□□□□□ -0.92
COPS4-209ENST00000511653 C4BP0C0L5 1744 aa9.31□□□□□ -0.92
COPS4-209ENST00000511653 FYB1O15117 783 aa9.3□□□□□ -0.92
COPS4-209ENST00000511653 DESI1Q6ICB0 168 aa9.3□□□□□ -0.92
COPS4-209ENST00000511653 MAP10Q9P2G4 905 aa9.3□□□□□ -0.92
COPS4-209ENST00000511653 SALL2Q9Y467 1007 aaPredicted RBP9.3□□□□□ -0.92
COPS4-209ENST00000511653 USP47Q96K76 1375 aa9.3□□□□□ -0.92
COPS4-209ENST00000511653 FMNL1O95466 1100 aaPredicted RBP9.29□□□□□ -0.92
COPS4-209ENST00000511653 PTPN5P54829 565 aa9.29□□□□□ -0.92
COPS4-209ENST00000511653 C1QTNF8P60827 252 aa9.29□□□□□ -0.92
COPS4-209ENST00000511653 MSL1Q68DK7 614 aa9.29□□□□□ -0.92
COPS4-209ENST00000511653 COL23A1Q86Y22 540 aaPredicted RBP9.29□□□□□ -0.92
COPS4-209ENST00000511653 SMG6Q86US8 1419 aaKnown RBP9.29□□□□□ -0.92
COPS4-209ENST00000511653 SENP3-EIF4A1A0A087X0R7 540 aa9.29□□□□□ -0.92
COPS4-209ENST00000511653 NR1I2O75469 434 aa9.29□□□□□ -0.92
COPS4-209ENST00000511653 YBX3P16989 372 aaKnown RBP eCLIP9.29□□□□□ -0.92
COPS4-209ENST00000511653 HSP90AB2PQ58FF8 381 aa9.29□□□□□ -0.92
COPS4-209ENST00000511653 GLMNQ92990 594 aa9.29□□□□□ -0.92
COPS4-209ENST00000511653 INSRP06213 1382 aa9.28□□□□□ -0.92
COPS4-209ENST00000511653 F12P00748 615 aaPredicted RBP9.28□□□□□ -0.92
COPS4-209ENST00000511653 AMIGO3Q86WK7 504 aa9.28□□□□□ -0.92
COPS4-209ENST00000511653 ZNF516Q92618 1163 aa9.28□□□□□ -0.92
COPS4-209ENST00000511653 FLT4P35916 1363 aa9.27□□□□□ -0.92
COPS4-209ENST00000511653 PALLDQ8WX93 1383 aa9.27□□□□□ -0.92
COPS4-209ENST00000511653 CYP27B1O15528 508 aa9.27□□□□□ -0.93
COPS4-209ENST00000511653 JUNDP17535 347 aa9.27□□□□□ -0.93
COPS4-209ENST00000511653 RAPGEF4Q8WZA2 1011 aa9.27□□□□□ -0.93
COPS4-209ENST00000511653 SPSB2Q99619 263 aa9.27□□□□□ -0.93
COPS4-209ENST00000511653 PCNTO95613 3336 aa9.27□□□□□ -0.93
COPS4-209ENST00000511653 NCAPD2Q15021 1401 aa9.27□□□□□ -0.93
COPS4-209ENST00000511653 CGNL1Q0VF96 1302 aa9.27□□□□□ -0.93
COPS4-209ENST00000511653 PCDH11XQ9BZA7 1347 aa9.27□□□□□ -0.93
COPS4-209ENST00000511653 PCDH11YQ9BZA8 1340 aa9.27□□□□□ -0.93
COPS4-209ENST00000511653 SMIM5Q71RC9 77 aa9.26□□□□□ -0.93
COPS4-209ENST00000511653 MTRQ99707 1265 aa9.26□□□□□ -0.93
COPS4-209ENST00000511653 NSD3Q9BZ95 1437 aa9.26□□□□□ -0.93
COPS4-209ENST00000511653 TATP17735 454 aaPredicted RBP9.26□□□□□ -0.93
COPS4-209ENST00000511653 TMF1P82094 1093 aa9.26□□□□□ -0.93
COPS4-209ENST00000511653 MPRIPQ6WCQ1 1025 aa9.26□□□□□ -0.93
COPS4-209ENST00000511653 PRM3Q9NNZ6 103 aa9.26□□□□□ -0.93
COPS4-209ENST00000511653 EMILIN1Q9Y6C2 1016 aa9.26□□□□□ -0.93
COPS4-209ENST00000511653 KIAA1551Q9HCM1 1747 aa9.25□□□□□ -0.93
COPS4-209ENST00000511653 GIGYF1O75420 1035 aaPredicted RBP9.25□□□□□ -0.93
COPS4-209ENST00000511653 HDGFL1Q5TGJ6 251 aa9.25□□□□□ -0.93
COPS4-209ENST00000511653 CALR3Q96L12 384 aaKnown RBP9.25□□□□□ -0.93
COPS4-209ENST00000511653 CARD14Q9BXL6 1004 aa9.25□□□□□ -0.93
COPS4-209ENST00000511653 KIF24Q5T7B8 1368 aa9.25□□□□□ -0.93
COPS4-209ENST00000511653 ATP10DQ9P241 1426 aa9.24□□□□□ -0.93
COPS4-209ENST00000511653 TJAP1Q5JTD0 557 aa9.24□□□□□ -0.93
COPS4-209ENST00000511653 KIF13BQ9NQT8 1826 aa9.24□□□□□ -0.93
COPS4-209ENST00000511653 ZPR1O75312 459 aa9.23□□□□□ -0.93
COPS4-209ENST00000511653 DXOO77932 396 aaKnown RBP9.23□□□□□ -0.93
COPS4-209ENST00000511653 MSS51Q4VC12 460 aa9.23□□□□□ -0.93
COPS4-209ENST00000511653 N4BP2Q86UW6 1770 aaPredicted RBP9.23□□□□□ -0.93
COPS4-209ENST00000511653 COL5A3P25940 1745 aaPredicted RBP9.23□□□□□ -0.93
COPS4-209ENST00000511653 PTPRNQ16849 979 aa9.23□□□□□ -0.93
COPS4-209ENST00000511653 NKX2-3Q8TAU0 364 aa9.23□□□□□ -0.93
COPS4-209ENST00000511653 PIGBQ92521 554 aa9.23□□□□□ -0.93
COPS4-209ENST00000511653 CCDC97Q96F63 343 aaPredicted RBP9.23□□□□□ -0.93
COPS4-209ENST00000511653 SERPINA10Q9UK55 444 aa9.23□□□□□ -0.93
COPS4-209ENST00000511653 WWC3Q9ULE0 1092 aa9.23□□□□□ -0.93
COPS4-209ENST00000511653 ADCY9O60503 1353 aa9.23□□□□□ -0.93
COPS4-209ENST00000511653 MYH14Q7Z406 1995 aaKnown RBP9.22□□□□□ -0.93
COPS4-209ENST00000511653 GRIN3BO60391 1043 aa9.22□□□□□ -0.93
COPS4-209ENST00000511653 MMP16P51512 607 aa9.22□□□□□ -0.93
COPS4-209ENST00000511653 ALG2Q9H553 416 aa9.22□□□□□ -0.93
COPS4-209ENST00000511653 C4AP0C0L4 1744 aa9.22□□□□□ -0.93
COPS4-209ENST00000511653 BRCA1P38398 1863 aaKnown RBP9.21□□□□□ -0.93
COPS4-209ENST00000511653 LINC00116Q8NCU8 138 aa9.21□□□□□ -0.93
COPS4-209ENST00000511653 CD2APQ9Y5K6 639 aa9.21□□□□□ -0.93
COPS4-209ENST00000511653 CICQ96RK0 1608 aaPredicted RBP9.2□□□□□ -0.94
COPS4-209ENST00000511653 PPM1GO15355 546 aaPredicted RBP9.2□□□□□ -0.94
COPS4-209ENST00000511653 FBXO45P0C2W1 286 aa9.2□□□□□ -0.94
COPS4-209ENST00000511653 CTHP32929 405 aa9.2□□□□□ -0.94
COPS4-209ENST00000511653 ITPK1Q13572 414 aa9.2□□□□□ -0.94
COPS4-209ENST00000511653 PTCRAQ6ISU1 281 aaPredicted RBP9.2□□□□□ -0.94
COPS4-209ENST00000511653 WWC1Q8IX03 1113 aa9.2□□□□□ -0.94
COPS4-209ENST00000511653 FLAD1Q8NFF5 587 aa9.2□□□□□ -0.94
COPS4-209ENST00000511653 OCSTAMPQ9BR26 566 aa9.2□□□□□ -0.94
COPS4-209ENST00000511653 ZNF831Q5JPB2 1677 aa9.2□□□□□ -0.94
COPS4-209ENST00000511653 IGSF1Q8N6C5 1336 aa9.2□□□□□ -0.94
COPS4-209ENST00000511653 LOC102724428A0A0B4J2F2 783 aa9.2□□□□□ -0.94
COPS4-209ENST00000511653 ADH1BP00325 375 aa9.2□□□□□ -0.94
COPS4-209ENST00000511653 SIK1P57059 783 aa9.2□□□□□ -0.94
COPS4-209ENST00000511653 WASHC4Q2M389 1173 aa9.2□□□□□ -0.94
COPS4-209ENST00000511653 SMARCC1Q92922 1105 aaPredicted RBP9.2□□□□□ -0.94
COPS4-209ENST00000511653 UCN2Q96RP3 112 aa9.2□□□□□ -0.94
COPS4-209ENST00000511653 NUDT12Q9BQG2 462 aa9.2□□□□□ -0.94
COPS4-209ENST00000511653 FKBPLQ9UIM3 349 aa9.2□□□□□ -0.94
COPS4-209ENST00000511653 ASAP1Q9ULH1 1129 aa9.2□□□□□ -0.94
COPS4-209ENST00000511653 KDRP35968 1356 aa9.19□□□□□ -0.94
COPS4-209ENST00000511653 VIRMAQ69YN4 1812 aaKnown RBP9.19□□□□□ -0.94
COPS4-209ENST00000511653 CDCA8Q53HL2 280 aa9.19□□□□□ -0.94
COPS4-209ENST00000511653 ZNF526Q8TF50 670 aaPredicted RBP9.19□□□□□ -0.94
COPS4-209ENST00000511653 EVA1BQ9NVM1 165 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms