RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 RFC4P35249 363 aa18.6■□□□□ 0.57
SCLT1-209ENST00000511426 KCNQ4P56696 695 aa18.6■□□□□ 0.57
SCLT1-209ENST00000511426 TAF7LQ5H9L4 462 aa18.6■□□□□ 0.57
SCLT1-209ENST00000511426 NUTM1Q86Y26 1132 aa18.6■□□□□ 0.57
SCLT1-209ENST00000511426 ARHGEF1Q92888 912 aaKnown RBP18.6■□□□□ 0.57
SCLT1-209ENST00000511426 RGS17Q9UGC6 210 aaPredicted RBP18.6■□□□□ 0.57
SCLT1-209ENST00000511426 TUBGCP6Q96RT7 1819 aa18.6■□□□□ 0.57
SCLT1-209ENST00000511426 TXNRD1Q16881 649 aa18.6■□□□□ 0.57
SCLT1-209ENST00000511426 TNNI3KQ59H18 835 aa18.6■□□□□ 0.57
SCLT1-209ENST00000511426 ATG9AQ7Z3C6 839 aa18.6■□□□□ 0.57
SCLT1-209ENST00000511426 KLHDC4Q8TBB5 520 aa18.6■□□□□ 0.57
SCLT1-209ENST00000511426 EAF2Q96CJ1 260 aaPredicted RBP18.6■□□□□ 0.57
SCLT1-209ENST00000511426 DDRGK1Q96HY6 314 aa18.6■□□□□ 0.57
SCLT1-209ENST00000511426 FPGT-TNNI3KV9GXZ4 949 aa18.6■□□□□ 0.57
SCLT1-209ENST00000511426 C4AP0C0L4 1744 aa18.59■□□□□ 0.57
SCLT1-209ENST00000511426 CCDC152Q4G0S7 254 aa18.59■□□□□ 0.57
SCLT1-209ENST00000511426 USPL1Q5W0Q7 1092 aa18.59■□□□□ 0.57
SCLT1-209ENST00000511426 TICAM2Q86XR7 235 aa18.59■□□□□ 0.57
SCLT1-209ENST00000511426 CNTROBQ8N137 903 aa18.59■□□□□ 0.57
SCLT1-209ENST00000511426 SETDB2Q96T68 719 aa18.59■□□□□ 0.57
SCLT1-209ENST00000511426 BCL2L12Q9HB09 334 aa18.59■□□□□ 0.57
SCLT1-209ENST00000511426 AKAP2Q9Y2D5 859 aa18.59■□□□□ 0.57
SCLT1-209ENST00000511426 ITGA6P23229 1130 aa18.58■□□□□ 0.57
SCLT1-209ENST00000511426 SLC10A5Q5PT55 438 aa18.58■□□□□ 0.57
SCLT1-209ENST00000511426 TBC1D32Q96NH3 1257 aa18.58■□□□□ 0.57
SCLT1-209ENST00000511426 UBR3Q6ZT12 1888 aa18.58■□□□□ 0.56
SCLT1-209ENST00000511426 EPB41L2O43491 1005 aaKnown RBP18.57■□□□□ 0.56
SCLT1-209ENST00000511426 TFCP2Q12800 502 aa18.57■□□□□ 0.56
SCLT1-209ENST00000511426 CEP126Q9P2H0 1117 aa18.57■□□□□ 0.56
SCLT1-209ENST00000511426 DDX60Q8IY21 1712 aaKnown RBP18.57■□□□□ 0.56
SCLT1-209ENST00000511426 RIC1Q4ADV7 1423 aa18.57■□□□□ 0.56
SCLT1-209ENST00000511426 SEC24BO95487 1268 aa18.57■□□□□ 0.56
SCLT1-209ENST00000511426 GREM2Q9H772 168 aa18.57■□□□□ 0.56
SCLT1-209ENST00000511426 CARMIL3Q8ND23 1372 aa18.56■□□□□ 0.56
SCLT1-209ENST00000511426 ZNF609O15014 1411 aa18.56■□□□□ 0.56
SCLT1-209ENST00000511426 TBC1D9BQ66K14 1250 aa18.56■□□□□ 0.56
SCLT1-209ENST00000511426 POTEAQ6S8J7 498 aa18.56■□□□□ 0.56
SCLT1-209ENST00000511426 TPTE2Q6XPS3 522 aa18.56■□□□□ 0.56
SCLT1-209ENST00000511426 FLAD1Q8NFF5 587 aa18.56■□□□□ 0.56
SCLT1-209ENST00000511426 BCL11AQ9H165 835 aa18.56■□□□□ 0.56
SCLT1-209ENST00000511426 TNS1Q9HBL0 1735 aaKnown RBP18.56■□□□□ 0.56
SCLT1-209ENST00000511426 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.55■□□□□ 0.56
SCLT1-209ENST00000511426 REC8O95072 547 aa18.55■□□□□ 0.56
SCLT1-209ENST00000511426 APBA3O96018 575 aa18.55■□□□□ 0.56
SCLT1-209ENST00000511426 SF3B3Q15393 1217 aaKnown RBP18.55■□□□□ 0.56
SCLT1-209ENST00000511426 ABCC12Q96J65 1359 aa18.55■□□□□ 0.56
SCLT1-209ENST00000511426 TRIM6-TRIM34B2RNG4 842 aa18.54■□□□□ 0.56
SCLT1-209ENST00000511426 ATP5JP18859 108 aa18.54■□□□□ 0.56
SCLT1-209ENST00000511426 RBM25P49756 843 aaKnown RBP18.54■□□□□ 0.56
SCLT1-209ENST00000511426 MFAP1P55081 439 aaKnown RBP18.54■□□□□ 0.56
SCLT1-209ENST00000511426 LDHAL6AQ6ZMR3 332 aa18.54■□□□□ 0.56
SCLT1-209ENST00000511426 SYNE4Q8N205 404 aa18.54■□□□□ 0.56
SCLT1-209ENST00000511426 EVI5LQ96CN4 794 aa18.54■□□□□ 0.56
SCLT1-209ENST00000511426 RIPOR2Q9Y4F9 1068 aa18.54■□□□□ 0.56
SCLT1-209ENST00000511426 MROH5Q6ZUA9 1318 aa18.54■□□□□ 0.56
SCLT1-209ENST00000511426 RFX7Q2KHR2 1363 aa18.54■□□□□ 0.56
SCLT1-209ENST00000511426 HIP1O00291 1037 aa18.54■□□□□ 0.56
SCLT1-209ENST00000511426 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.54■□□□□ 0.562e-6■■□□□ 12.4
SCLT1-209ENST00000511426 CDC5LQ99459 802 aaKnown RBP18.54■□□□□ 0.56
SCLT1-209ENST00000511426 C22orf23Q9BZE7 217 aa18.54■□□□□ 0.56
SCLT1-209ENST00000511426 SRP68Q9UHB9 627 aaKnown RBP18.54■□□□□ 0.56
SCLT1-209ENST00000511426 GTF2E1P29083 439 aaPredicted RBP18.53■□□□□ 0.56
SCLT1-209ENST00000511426 LRRC24Q50LG9 513 aa18.53■□□□□ 0.56
SCLT1-209ENST00000511426 PROM2Q8N271 834 aa18.53■□□□□ 0.56
SCLT1-209ENST00000511426 IPO9Q96P70 1041 aaKnown RBP18.53■□□□□ 0.56
SCLT1-209ENST00000511426 CCDC8Q9H0W5 538 aaPredicted RBP18.53■□□□□ 0.56
SCLT1-209ENST00000511426 DBNLQ9UJU6 430 aaKnown RBP18.53■□□□□ 0.56
SCLT1-209ENST00000511426 HCLS1P14317 486 aaPredicted RBP18.52■□□□□ 0.56
SCLT1-209ENST00000511426 TSHZ3Q63HK5 1081 aa18.52■□□□□ 0.56
SCLT1-209ENST00000511426 NBPF5PQ86XG9 351 aaPredicted RBP18.52■□□□□ 0.56
SCLT1-209ENST00000511426 RILPL2Q969X0 211 aa18.52■□□□□ 0.56
SCLT1-209ENST00000511426 ZNF594Q96JF6 807 aaPredicted RBP18.52■□□□□ 0.56
SCLT1-209ENST00000511426 CNNM1Q9NRU3 951 aa18.52■□□□□ 0.56
SCLT1-209ENST00000511426 PHF14O94880 888 aa18.51■□□□□ 0.55
SCLT1-209ENST00000511426 IGHMBP2P38935 993 aaKnown RBP18.51■□□□□ 0.55
SCLT1-209ENST00000511426 CHMLP26374 656 aa18.5■□□□□ 0.55
SCLT1-209ENST00000511426 AMIGO3Q86WK7 504 aa18.5■□□□□ 0.55
SCLT1-209ENST00000511426 NLRP3Q96P20 1036 aa18.5■□□□□ 0.55
SCLT1-209ENST00000511426 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.5■□□□□ 0.55
SCLT1-209ENST00000511426 A0A1B0GUL7 405 aa18.5■□□□□ 0.55
SCLT1-209ENST00000511426 ERFEQ4G0M1 354 aa18.5■□□□□ 0.55
SCLT1-209ENST00000511426 METTL24Q5JXM2 366 aa18.5■□□□□ 0.55
SCLT1-209ENST00000511426 RUFY2Q8WXA3 655 aa18.5■□□□□ 0.55
SCLT1-209ENST00000511426 AKT1S1Q96B36 256 aa18.5■□□□□ 0.55
SCLT1-209ENST00000511426 MPHOSPH8Q99549 860 aa18.5■□□□□ 0.55
SCLT1-209ENST00000511426 PUS3Q9BZE2 481 aaKnown RBP18.5■□□□□ 0.55
SCLT1-209ENST00000511426 FAM177BA6PVY3 158 aa18.49■□□□□ 0.55
SCLT1-209ENST00000511426 GYS1P13807 737 aa18.49■□□□□ 0.55
SCLT1-209ENST00000511426 VGLL2Q8N8G2 317 aa18.49■□□□□ 0.55
SCLT1-209ENST00000511426 IL27Q8NEV9 243 aa18.49■□□□□ 0.55
SCLT1-209ENST00000511426 TLR7Q9NYK1 1049 aaKnown RBP18.49■□□□□ 0.55
SCLT1-209ENST00000511426 SPEF2Q9C093 1822 aa18.49■□□□□ 0.55
SCLT1-209ENST00000511426 PDE8BO95263 885 aa18.48■□□□□ 0.55
SCLT1-209ENST00000511426 BICDL1Q6ZP65 573 aa18.48■□□□□ 0.55
SCLT1-209ENST00000511426 ZNF512BQ96KM6 892 aaPredicted RBP18.48■□□□□ 0.55
SCLT1-209ENST00000511426 CCDC85AQ96PX6 553 aaPredicted RBP18.48■□□□□ 0.55
SCLT1-209ENST00000511426 DBNDD2Q9BQY9 259 aa18.48■□□□□ 0.55
SCLT1-209ENST00000511426 ESYT1Q9BSJ8 1104 aa18.48■□□□□ 0.55
SCLT1-209ENST00000511426 NFIXQ14938 502 aa18.47■□□□□ 0.55
SCLT1-209ENST00000511426 CCDC158Q5M9N0 1113 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 274.5 ms