RNA–Protein interactions for RNA: ENST00000511355.5

NME1-209, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 5 BASIC

Gene NME1, Length 1,645 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-209ENST00000511355 MSL1Q68DK7 614 aa17.03■□□□□ 0.32
NME1-209ENST00000511355 C4AP0C0L4 1744 aa17.03■□□□□ 0.32
NME1-209ENST00000511355 ADRA2BP18089 450 aa17.03■□□□□ 0.32
NME1-209ENST00000511355 AFDNP55196 1824 aaKnown RBP17.03■□□□□ 0.32
NME1-209ENST00000511355 PHF14O94880 888 aa17.02■□□□□ 0.31
NME1-209ENST00000511355 HSP90AB3PQ58FF7 597 aa17.02■□□□□ 0.31
NME1-209ENST00000511355 GIGYF2Q6Y7W6 1299 aaKnown RBP17.02■□□□□ 0.31
NME1-209ENST00000511355 MYD88Q99836 296 aa17.02■□□□□ 0.31
NME1-209ENST00000511355 NEURL1BA8MQ27 555 aa17.01■□□□□ 0.31
NME1-209ENST00000511355 BAG4O95429 457 aaKnown RBP17.01■□□□□ 0.31
NME1-209ENST00000511355 IGKV5-2P06315 115 aa17.01■□□□□ 0.31
NME1-209ENST00000511355 MCCP23508 829 aa17.01■□□□□ 0.31
NME1-209ENST00000511355 ATP8B2P98198 1209 aa17.01■□□□□ 0.31
NME1-209ENST00000511355 ZNF784Q8NCA9 323 aaPredicted RBP17.01■□□□□ 0.31
NME1-209ENST00000511355 NLGN2Q8NFZ4 835 aa17.01■□□□□ 0.31
NME1-209ENST00000511355 MEIS3Q99687 375 aa17.01■□□□□ 0.31
NME1-209ENST00000511355 STAP2Q9UGK3 403 aa17.01■□□□□ 0.31
NME1-209ENST00000511355 TBC1D2BQ9UPU7 963 aa17.01■□□□□ 0.31
NME1-209ENST00000511355 NUP98P52948 1817 aa17.01■□□□□ 0.31
NME1-209ENST00000511355 SALL3Q9BXA9 1300 aa17■□□□□ 0.31
NME1-209ENST00000511355 CAMTA2O94983 1202 aa17■□□□□ 0.31
NME1-209ENST00000511355 CD2BP2O95400 341 aaKnown RBP17■□□□□ 0.31
NME1-209ENST00000511355 PDE1AP54750 535 aa17■□□□□ 0.31
NME1-209ENST00000511355 ZNF445P59923 1031 aa17■□□□□ 0.31
NME1-209ENST00000511355 CWF19L2Q2TBE0 894 aaKnown RBP17■□□□□ 0.31
NME1-209ENST00000511355 TCIRG1Q13488 830 aa16.99■□□□□ 0.31
NME1-209ENST00000511355 USP44Q9H0E7 712 aa16.99■□□□□ 0.31
NME1-209ENST00000511355 ZNF652Q9Y2D9 606 aa16.99■□□□□ 0.31
NME1-209ENST00000511355 TRIM28Q13263 835 aaKnown RBP16.99■□□□□ 0.31
NME1-209ENST00000511355 CCDC191Q8NCU4 936 aa16.99■□□□□ 0.31
NME1-209ENST00000511355 INTS4Q96HW7 963 aaKnown RBP16.99■□□□□ 0.31
NME1-209ENST00000511355 ISCA1Q9BUE6 129 aa16.99■□□□□ 0.31
NME1-209ENST00000511355 UTYO14607 1347 aa16.98■□□□□ 0.31
NME1-209ENST00000511355 RAB11FIP3O75154 756 aa16.98■□□□□ 0.31
NME1-209ENST00000511355 CCDC173Q0VFZ6 552 aa16.98■□□□□ 0.31
NME1-209ENST00000511355 GCKRQ14397 625 aa16.98■□□□□ 0.31
NME1-209ENST00000511355 HS1BP3Q53T59 392 aa16.98■□□□□ 0.31
NME1-209ENST00000511355 TRAPPC3LQ5T215 181 aa16.98■□□□□ 0.31
NME1-209ENST00000511355 CLEC4GQ6UXB4 293 aa16.98■□□□□ 0.31
NME1-209ENST00000511355 ANP32BQ92688 251 aaKnown RBP16.98■□□□□ 0.31
NME1-209ENST00000511355 LRRCC1Q9C099 1032 aa16.98■□□□□ 0.31
NME1-209ENST00000511355 GZF1Q9H116 711 aaPredicted RBP16.98■□□□□ 0.31
NME1-209ENST00000511355 NARFQ9UHQ1 456 aa16.98■□□□□ 0.31
NME1-209ENST00000511355 HDAC5Q9UQL6 1122 aa16.98■□□□□ 0.31
NME1-209ENST00000511355 GRM8O00222 908 aa16.97■□□□□ 0.31
NME1-209ENST00000511355 UBTFL1P0CB47 393 aaPredicted RBP16.97■□□□□ 0.31
NME1-209ENST00000511355 HLFQ16534 295 aa16.97■□□□□ 0.31
NME1-209ENST00000511355 AMIGO3Q86WK7 504 aa16.97■□□□□ 0.31
NME1-209ENST00000511355 PPP1R9BQ96SB3 815 aa16.97■□□□□ 0.31
NME1-209ENST00000511355 CWC25Q9NXE8 425 aaPredicted RBP16.97■□□□□ 0.31
NME1-209ENST00000511355 C9orf78Q9NZ63 289 aaPredicted RBP16.97■□□□□ 0.31
NME1-209ENST00000511355 USP42Q9H9J4 1324 aaKnown RBP16.97■□□□□ 0.31
NME1-209ENST00000511355 ATP5J2-PTCD1G3V325 749 aa16.96■□□□□ 0.31
NME1-209ENST00000511355 C16orf71Q8IYS4 520 aaPredicted RBP16.96■□□□□ 0.31
NME1-209ENST00000511355 ARHGEF1Q92888 912 aaKnown RBP16.96■□□□□ 0.31
NME1-209ENST00000511355 ZPR1O75312 459 aa16.96■□□□□ 0.3
NME1-209ENST00000511355 RFC4P35249 363 aa16.96■□□□□ 0.3
NME1-209ENST00000511355 NLGN1Q8N2Q7 840 aa16.96■□□□□ 0.3
NME1-209ENST00000511355 TRIM44Q96DX7 344 aaPredicted RBP16.96■□□□□ 0.3
NME1-209ENST00000511355 RRAGDQ9NQL2 400 aaPredicted RBP16.96■□□□□ 0.3
NME1-209ENST00000511355 NBPF7P0C2Y1 421 aaPredicted RBP16.95■□□□□ 0.3
NME1-209ENST00000511355 ZNF34Q8IZ26 560 aa16.95■□□□□ 0.3
NME1-209ENST00000511355 DDX49Q9Y6V7 483 aaKnown RBP16.95■□□□□ 0.3
NME1-209ENST00000511355 CUL4AQ13619 759 aa16.94■□□□□ 0.3
NME1-209ENST00000511355 YBX3P16989 372 aaKnown RBP eCLIP16.93■□□□□ 0.31e-8■■■□□ 18.2
NME1-209ENST00000511355 PARP10Q53GL7 1025 aa16.93■□□□□ 0.3
NME1-209ENST00000511355 USPL1Q5W0Q7 1092 aa16.93■□□□□ 0.3
NME1-209ENST00000511355 SMIM5Q71RC9 77 aa16.93■□□□□ 0.3
NME1-209ENST00000511355 NLRP10Q86W26 655 aa16.93■□□□□ 0.3
NME1-209ENST00000511355 ESYT1Q9BSJ8 1104 aa16.93■□□□□ 0.3
NME1-209ENST00000511355 UBN2Q6ZU65 1347 aa16.93■□□□□ 0.3
NME1-209ENST00000511355 ESPNB1AK53 854 aa16.92■□□□□ 0.3
NME1-209ENST00000511355 MBD3O95983 291 aa16.92■□□□□ 0.3
NME1-209ENST00000511355 MX1P20591 662 aa16.92■□□□□ 0.3
NME1-209ENST00000511355 HSP90AB4PQ58FF6 505 aa16.92■□□□□ 0.3
NME1-209ENST00000511355 H7C1W4 665 aa16.92■□□□□ 0.3
NME1-209ENST00000511355 GPTP24298 496 aa16.92■□□□□ 0.3
NME1-209ENST00000511355 UBE3BQ7Z3V4 1068 aa16.92■□□□□ 0.3
NME1-209ENST00000511355 SSH3Q8TE77 659 aa16.92■□□□□ 0.3
NME1-209ENST00000511355 PANK2Q9BZ23 570 aa16.92■□□□□ 0.3
NME1-209ENST00000511355 BCL2L12Q9HB09 334 aa16.92■□□□□ 0.3
NME1-209ENST00000511355 LMBRD1Q9NUN5 540 aa16.92■□□□□ 0.3
NME1-209ENST00000511355 SRP68Q9UHB9 627 aaKnown RBP16.92■□□□□ 0.3
NME1-209ENST00000511355 LRRFIP2Q9Y608 721 aaKnown RBP16.92■□□□□ 0.3
NME1-209ENST00000511355 MMP10P09238 476 aa16.91■□□□□ 0.3
NME1-209ENST00000511355 CASP7P55210 303 aa16.91■□□□□ 0.3
NME1-209ENST00000511355 ZBTB38Q8NAP3 1195 aaPredicted RBP16.91■□□□□ 0.3
NME1-209ENST00000511355 OTUD7AQ8TE49 926 aaPredicted RBP16.91■□□□□ 0.3
NME1-209ENST00000511355 NIP7Q9Y221 180 aaKnown RBP eCLIP16.91■□□□□ 0.3
NME1-209ENST00000511355 PCCAP05165 728 aaPredicted RBP16.9■□□□□ 0.3
NME1-209ENST00000511355 GAS2L3Q86XJ1 694 aa16.9■□□□□ 0.3
NME1-209ENST00000511355 SMARCA5O60264 1052 aaPredicted RBP16.89■□□□□ 0.29
NME1-209ENST00000511355 PDIA4P13667 645 aaKnown RBP16.89■□□□□ 0.29
NME1-209ENST00000511355 LAMB2P55268 1798 aa16.89■□□□□ 0.29
NME1-209ENST00000511355 CDHR2Q9BYE9 1310 aa16.89■□□□□ 0.29
NME1-209ENST00000511355 GYS1P13807 737 aa16.88■□□□□ 0.29
NME1-209ENST00000511355 CHMLP26374 656 aa16.88■□□□□ 0.29
NME1-209ENST00000511355 NASPP49321 788 aaPredicted RBP16.88■□□□□ 0.29
NME1-209ENST00000511355 TGFB2P61812 414 aa16.88■□□□□ 0.29
NME1-209ENST00000511355 MTX1Q13505 466 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms