RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 ZBTB38Q8NAP3 1195 aaPredicted RBP11.6□□□□□ -0.55
POLR2J3-215ENST00000511313 XRN1Q8IZH2 1706 aaKnown RBP11.6□□□□□ -0.55
POLR2J3-215ENST00000511313 ATP2B3Q16720 1220 aa11.59□□□□□ -0.55
POLR2J3-215ENST00000511313 MBIPQ9NS73 344 aa11.59□□□□□ -0.55
POLR2J3-215ENST00000511313 CHPF2Q9P2E5 772 aa11.59□□□□□ -0.55
POLR2J3-215ENST00000511313 PI4KAP2A4QPH2 592 aa11.59□□□□□ -0.55
POLR2J3-215ENST00000511313 HIBADHP31937 336 aaKnown RBP11.59□□□□□ -0.55
POLR2J3-215ENST00000511313 TRIM29Q14134 588 aa11.59□□□□□ -0.55
POLR2J3-215ENST00000511313 PI4KAP1Q8N8J0 262 aa11.59□□□□□ -0.55
POLR2J3-215ENST00000511313 CCDC43Q96MW1 224 aaKnown RBP11.59□□□□□ -0.55
POLR2J3-215ENST00000511313 FSD1Q9BTV5 496 aa11.59□□□□□ -0.55
POLR2J3-215ENST00000511313 IREB2P48200 963 aaKnown RBP11.59□□□□□ -0.55
POLR2J3-215ENST00000511313 TNPO1Q92973 898 aaKnown RBP11.59□□□□□ -0.55
POLR2J3-215ENST00000511313 ATG3Q9NT62 314 aa11.59□□□□□ -0.55
POLR2J3-215ENST00000511313 HACL1Q9UJ83 578 aa11.59□□□□□ -0.55
POLR2J3-215ENST00000511313 TAOK2Q9UL54 1235 aa11.59□□□□□ -0.55
POLR2J3-215ENST00000511313 APBB1O00213 710 aa11.58□□□□□ -0.56
POLR2J3-215ENST00000511313 LDHBP07195 334 aaKnown RBP11.58□□□□□ -0.56
POLR2J3-215ENST00000511313 GRAPQ13588 217 aa11.58□□□□□ -0.56
POLR2J3-215ENST00000511313 GRAPLQ8TC17 118 aaPredicted RBP11.58□□□□□ -0.56
POLR2J3-215ENST00000511313 PXDNQ92626 1479 aa11.58□□□□□ -0.56
POLR2J3-215ENST00000511313 CLUAP1Q96AJ1 413 aa11.58□□□□□ -0.56
POLR2J3-215ENST00000511313 ASAP1Q9ULH1 1129 aa11.58□□□□□ -0.56
POLR2J3-215ENST00000511313 PDE4BQ07343 736 aa11.58□□□□□ -0.56
POLR2J3-215ENST00000511313 COA1Q9GZY4 146 aa11.58□□□□□ -0.56
POLR2J3-215ENST00000511313 CHD2O14647 1828 aaKnown RBP11.58□□□□□ -0.56
POLR2J3-215ENST00000511313 UBE4AQ14139 1066 aa11.58□□□□□ -0.56
POLR2J3-215ENST00000511313 RAD21O60216 631 aa11.57□□□□□ -0.56
POLR2J3-215ENST00000511313 PUM3Q15397 648 aaKnown RBP11.57□□□□□ -0.56
POLR2J3-215ENST00000511313 ZNF444Q8N0Y2 327 aaPredicted RBP11.57□□□□□ -0.56
POLR2J3-215ENST00000511313 FMN2Q9NZ56 1722 aa11.57□□□□□ -0.56
POLR2J3-215ENST00000511313 SLFN5Q08AF3 891 aa11.57□□□□□ -0.56
POLR2J3-215ENST00000511313 ABCF2Q9UG63 623 aa11.57□□□□□ -0.56
POLR2J3-215ENST00000511313 DEFB132Q7Z7B7 95 aa11.57□□□□□ -0.56
POLR2J3-215ENST00000511313 SMC1BQ8NDV3 1235 aa11.57□□□□□ -0.56
POLR2J3-215ENST00000511313 VEGFAP15692 232 aaPredicted RBP11.56□□□□□ -0.56
POLR2J3-215ENST00000511313 PODNQ7Z5L7 613 aa11.56□□□□□ -0.56
POLR2J3-215ENST00000511313 DNAI2Q9GZS0 605 aa11.56□□□□□ -0.56
POLR2J3-215ENST00000511313 CYP27B1O15528 508 aa11.56□□□□□ -0.56
POLR2J3-215ENST00000511313 KRT32Q14532 448 aa11.56□□□□□ -0.56
POLR2J3-215ENST00000511313 CENPQQ7L2Z9 268 aaPredicted RBP11.56□□□□□ -0.56
POLR2J3-215ENST00000511313 SP8Q8IXZ3 490 aa11.56□□□□□ -0.56
POLR2J3-215ENST00000511313 GTF3C2Q8WUA4 911 aaPredicted RBP11.56□□□□□ -0.56
POLR2J3-215ENST00000511313 SAFBQ15424 915 aaKnown RBP eCLIP11.56□□□□□ -0.56
POLR2J3-215ENST00000511313 ABT1Q9ULW3 272 aaKnown RBP11.56□□□□□ -0.56
POLR2J3-215ENST00000511313 SUGT1Q9Y2Z0 365 aa11.56□□□□□ -0.56
POLR2J3-215ENST00000511313 CCNA1P78396 465 aa11.56□□□□□ -0.56
POLR2J3-215ENST00000511313 VPS53Q5VIR6 699 aa11.56□□□□□ -0.56
POLR2J3-215ENST00000511313 SLIT2O94813 1529 aa11.55□□□□□ -0.56
POLR2J3-215ENST00000511313 DCTN1Q14203 1278 aa11.55□□□□□ -0.56
POLR2J3-215ENST00000511313 CCDC47Q96A33 483 aaKnown RBP11.55□□□□□ -0.56
POLR2J3-215ENST00000511313 ATP10DQ9P241 1426 aa11.55□□□□□ -0.56
POLR2J3-215ENST00000511313 PDIA4P13667 645 aaKnown RBP11.55□□□□□ -0.56
POLR2J3-215ENST00000511313 TDO2P48775 406 aa11.55□□□□□ -0.56
POLR2J3-215ENST00000511313 CSPP1Q1MSJ5 1256 aa11.55□□□□□ -0.56
POLR2J3-215ENST00000511313 ANKRD45Q5TZF3 282 aa11.55□□□□□ -0.56
POLR2J3-215ENST00000511313 ARHGEF1Q92888 912 aaKnown RBP11.55□□□□□ -0.56
POLR2J3-215ENST00000511313 TEKT1Q969V4 418 aa11.55□□□□□ -0.56
POLR2J3-215ENST00000511313 PNMA3Q9UL41 463 aa11.55□□□□□ -0.56
POLR2J3-215ENST00000511313 MPHOSPH10O00566 681 aaKnown RBP11.55□□□□□ -0.56
POLR2J3-215ENST00000511313 TICAM2Q86XR7 235 aa11.55□□□□□ -0.56
POLR2J3-215ENST00000511313 TBC1D2Q9BYX2 928 aa11.55□□□□□ -0.56
POLR2J3-215ENST00000511313 MKNK2Q9HBH9 465 aa11.55□□□□□ -0.56
POLR2J3-215ENST00000511313 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.55□□□□□ -0.56
POLR2J3-215ENST00000511313 NFXL1Q6ZNB6 911 aa11.55□□□□□ -0.56
POLR2J3-215ENST00000511313 NOB1Q9ULX3 412 aaKnown RBP11.55□□□□□ -0.56
POLR2J3-215ENST00000511313 PER1O15534 1290 aaPredicted RBP11.54□□□□□ -0.56
POLR2J3-215ENST00000511313 A1BGP04217 495 aa11.54□□□□□ -0.56
POLR2J3-215ENST00000511313 RTL5Q5HYW3 569 aaPredicted RBP11.54□□□□□ -0.56
POLR2J3-215ENST00000511313 VEZTQ9HBM0 779 aa11.54□□□□□ -0.56
POLR2J3-215ENST00000511313 ZBTB1Q9Y2K1 713 aa11.54□□□□□ -0.56
POLR2J3-215ENST00000511313 LPIN2Q92539 896 aa11.54□□□□□ -0.56
POLR2J3-215ENST00000511313 IVNS1ABPQ9Y6Y0 642 aa11.54□□□□□ -0.56
POLR2J3-215ENST00000511313 INTS3Q68E01 1043 aaKnown RBP11.54□□□□□ -0.56
POLR2J3-215ENST00000511313 ATP5J2-PTCD1G3V325 749 aa11.53□□□□□ -0.56
POLR2J3-215ENST00000511313 CPLX1O14810 134 aa11.53□□□□□ -0.56
POLR2J3-215ENST00000511313 CYP19A1P11511 503 aaPredicted RBP11.53□□□□□ -0.56
POLR2J3-215ENST00000511313 AACSQ86V21 672 aa11.53□□□□□ -0.56
POLR2J3-215ENST00000511313 CUL5Q93034 780 aa11.53□□□□□ -0.56
POLR2J3-215ENST00000511313 IBTKQ9P2D0 1353 aaPredicted RBP11.53□□□□□ -0.56
POLR2J3-215ENST00000511313 TRIM28Q13263 835 aaKnown RBP11.53□□□□□ -0.56
POLR2J3-215ENST00000511313 GCKRQ14397 625 aa11.53□□□□□ -0.56
POLR2J3-215ENST00000511313 HSP90AA2PQ14568 343 aaPredicted RBP11.53□□□□□ -0.56
POLR2J3-215ENST00000511313 COPB2P35606 906 aa11.53□□□□□ -0.56
POLR2J3-215ENST00000511313 CTSWP56202 376 aa11.53□□□□□ -0.56
POLR2J3-215ENST00000511313 NAA16Q6N069 864 aaPredicted RBP11.53□□□□□ -0.56
POLR2J3-215ENST00000511313 ARHGEF10LQ9HCE6 1279 aa11.53□□□□□ -0.56
POLR2J3-215ENST00000511313 MIS18AQ9NYP9 233 aa11.53□□□□□ -0.56
POLR2J3-215ENST00000511313 CDHR2Q9BYE9 1310 aa11.53□□□□□ -0.56
POLR2J3-215ENST00000511313 ALDH1A1P00352 501 aa11.53□□□□□ -0.56
POLR2J3-215ENST00000511313 SREBF2Q12772 1141 aa11.53□□□□□ -0.56
POLR2J3-215ENST00000511313 TSR2Q969E8 191 aaKnown RBP11.53□□□□□ -0.56
POLR2J3-215ENST00000511313 RILPL2Q969X0 211 aa11.53□□□□□ -0.56
POLR2J3-215ENST00000511313 LGR6Q9HBX8 967 aa11.53□□□□□ -0.56
POLR2J3-215ENST00000511313 GINM1Q9NU53 330 aa11.53□□□□□ -0.56
POLR2J3-215ENST00000511313 SPC25Q9HBM1 224 aa11.52□□□□□ -0.56
POLR2J3-215ENST00000511313 USP42Q9H9J4 1324 aaKnown RBP11.52□□□□□ -0.57
POLR2J3-215ENST00000511313 FKBP4Q02790 459 aaKnown RBP eCLIP11.52□□□□□ -0.57
POLR2J3-215ENST00000511313 LMBR1LQ6UX01 489 aa11.52□□□□□ -0.57
POLR2J3-215ENST00000511313 IQCA1Q86XH1 822 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 219.1 ms