RNA–Protein interactions for RNA: ENST00000511032.5

DHFR-205, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-205ENST00000511032 SIL1Q9H173 461 aa13.07□□□□□ -0.32
DHFR-205ENST00000511032 PA2G4Q9UQ80 394 aaKnown RBP13.07□□□□□ -0.32
DHFR-205ENST00000511032 GLRX3O76003 335 aaKnown RBP13.06□□□□□ -0.32
DHFR-205ENST00000511032 CIAO1O76071 339 aa13.06□□□□□ -0.32
DHFR-205ENST00000511032 GTF2E1P29083 439 aaPredicted RBP13.06□□□□□ -0.32
DHFR-205ENST00000511032 IL15P40933 162 aaPredicted RBP13.06□□□□□ -0.32
DHFR-205ENST00000511032 PTPN12Q05209 780 aaKnown RBP13.06□□□□□ -0.32
DHFR-205ENST00000511032 ANKRD18BA2A2Z9 1011 aa13.05□□□□□ -0.32
DHFR-205ENST00000511032 CTSWP56202 376 aa13.05□□□□□ -0.32
DHFR-205ENST00000511032 AACSQ86V21 672 aa13.05□□□□□ -0.32
DHFR-205ENST00000511032 DDRGK1Q96HY6 314 aa13.05□□□□□ -0.32
DHFR-205ENST00000511032 TRIM6-TRIM34B2RNG4 842 aa13.04□□□□□ -0.32
DHFR-205ENST00000511032 PLSCR1O15162 318 aa13.04□□□□□ -0.32
DHFR-205ENST00000511032 CSF1RP07333 972 aa13.04□□□□□ -0.32
DHFR-205ENST00000511032 RFX5P48382 616 aaPredicted RBP13.04□□□□□ -0.32
DHFR-205ENST00000511032 SETDB2Q96T68 719 aa13.04□□□□□ -0.32
DHFR-205ENST00000511032 ECHDC1Q9NTX5 307 aa13.04□□□□□ -0.32
DHFR-205ENST00000511032 UBN2Q6ZU65 1347 aa13.04□□□□□ -0.32
DHFR-205ENST00000511032 LAMB2P55268 1798 aa13.04□□□□□ -0.32
DHFR-205ENST00000511032 EYA2O00167 538 aa13.04□□□□□ -0.32
DHFR-205ENST00000511032 NPHP1O15259 732 aa13.04□□□□□ -0.32
DHFR-205ENST00000511032 GSPT1P15170 499 aaKnown RBP13.04□□□□□ -0.32
DHFR-205ENST00000511032 SSFA2P28290 1259 aa13.04□□□□□ -0.32
DHFR-205ENST00000511032 KCNQ4P56696 695 aa13.04□□□□□ -0.32
DHFR-205ENST00000511032 CCDC152Q4G0S7 254 aa13.04□□□□□ -0.32
DHFR-205ENST00000511032 SUSD4Q5VX71 490 aa13.04□□□□□ -0.32
DHFR-205ENST00000511032 NUTM1Q86Y26 1132 aa13.04□□□□□ -0.32
DHFR-205ENST00000511032 CNTROBQ8N137 903 aa13.04□□□□□ -0.32
DHFR-205ENST00000511032 OTUD7AQ8TE49 926 aaPredicted RBP13.04□□□□□ -0.32
DHFR-205ENST00000511032 GPR108Q9NPR9 543 aa13.04□□□□□ -0.32
DHFR-205ENST00000511032 AKAP2Q9Y2D5 859 aa13.04□□□□□ -0.32
DHFR-205ENST00000511032 SALL3Q9BXA9 1300 aa13.03□□□□□ -0.32
DHFR-205ENST00000511032 USP42Q9H9J4 1324 aaKnown RBP13.03□□□□□ -0.32
DHFR-205ENST00000511032 APBA3O96018 575 aa13.03□□□□□ -0.32
DHFR-205ENST00000511032 SDSP20132 328 aa13.03□□□□□ -0.32
DHFR-205ENST00000511032 USPL1Q5W0Q7 1092 aa13.03□□□□□ -0.32
DHFR-205ENST00000511032 CEP126Q9P2H0 1117 aa13.03□□□□□ -0.32
DHFR-205ENST00000511032 FAM177BA6PVY3 158 aa13.02□□□□□ -0.33
DHFR-205ENST00000511032 SASH1O94885 1247 aa13.02□□□□□ -0.33
DHFR-205ENST00000511032 TXNRD1Q16881 649 aa13.02□□□□□ -0.33
DHFR-205ENST00000511032 TPTE2Q6XPS3 522 aa13.02□□□□□ -0.33
DHFR-205ENST00000511032 FLAD1Q8NFF5 587 aa13.02□□□□□ -0.33
DHFR-205ENST00000511032 TTLL11Q8NHH1 800 aa13.02□□□□□ -0.33
DHFR-205ENST00000511032 ARHGEF1Q92888 912 aaKnown RBP13.02□□□□□ -0.33
DHFR-205ENST00000511032 RILPL2Q969X0 211 aa13.02□□□□□ -0.33
DHFR-205ENST00000511032 RGPD3A6NKT7 1758 aaPredicted RBP13.01□□□□□ -0.33
DHFR-205ENST00000511032 RGPD4Q7Z3J3 1758 aa13.01□□□□□ -0.33
DHFR-205ENST00000511032 PHF14O94880 888 aa13.01□□□□□ -0.33
DHFR-205ENST00000511032 REC8O95072 547 aa13.01□□□□□ -0.33
DHFR-205ENST00000511032 NTSR2O95665 410 aa13.01□□□□□ -0.33
DHFR-205ENST00000511032 ITGA6P23229 1130 aa13.01□□□□□ -0.33
DHFR-205ENST00000511032 MFAP1P55081 439 aaKnown RBP13.01□□□□□ -0.33
DHFR-205ENST00000511032 TNNI3KQ59H18 835 aa13.01□□□□□ -0.33
DHFR-205ENST00000511032 TBC1D9Q6ZT07 1266 aa13.01□□□□□ -0.33
DHFR-205ENST00000511032 KLHDC4Q8TBB5 520 aa13.01□□□□□ -0.33
DHFR-205ENST00000511032 CNNM1Q9NRU3 951 aa13.01□□□□□ -0.33
DHFR-205ENST00000511032 FPGT-TNNI3KV9GXZ4 949 aa13.01□□□□□ -0.33
DHFR-205ENST00000511032 RTL9Q8NET4 1388 aa13.01□□□□□ -0.33
DHFR-205ENST00000511032 C4AP0C0L4 1744 aa13.01□□□□□ -0.33
DHFR-205ENST00000511032 AK9Q5TCS8 1911 aa13.01□□□□□ -0.33
DHFR-205ENST00000511032 CARMIL3Q8ND23 1372 aa13□□□□□ -0.33
DHFR-205ENST00000511032 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13□□□□□ -0.33
DHFR-205ENST00000511032 HIP1O00291 1037 aa13□□□□□ -0.33
DHFR-205ENST00000511032 IGHMBP2P38935 993 aaKnown RBP13□□□□□ -0.33
DHFR-205ENST00000511032 TFCP2Q12800 502 aa13□□□□□ -0.33
DHFR-205ENST00000511032 SF3B2Q13435 895 aaKnown RBP13□□□□□ -0.33
DHFR-205ENST00000511032 LDHAL6AQ6ZMR3 332 aa13□□□□□ -0.33
DHFR-205ENST00000511032 NBPF5PQ86XG9 351 aaPredicted RBP13□□□□□ -0.33
DHFR-205ENST00000511032 CDC5LQ99459 802 aaKnown RBP13□□□□□ -0.33
DHFR-205ENST00000511032 DAXXQ9UER7 740 aaPredicted RBP13□□□□□ -0.33
DHFR-205ENST00000511032 UBR3Q6ZT12 1888 aa13□□□□□ -0.33
DHFR-205ENST00000511032 COL24A1Q17RW2 1714 aa13□□□□□ -0.33
DHFR-205ENST00000511032 TBC1D9BQ66K14 1250 aa12.99□□□□□ -0.33
DHFR-205ENST00000511032 BICDL1Q6ZP65 573 aa12.99□□□□□ -0.33
DHFR-205ENST00000511032 EAF2Q96CJ1 260 aaPredicted RBP12.99□□□□□ -0.33
DHFR-205ENST00000511032 MPHOSPH8Q99549 860 aa12.99□□□□□ -0.33
DHFR-205ENST00000511032 GREM2Q9H772 168 aa12.99□□□□□ -0.33
DHFR-205ENST00000511032 LRRC4BQ9NT99 713 aa12.99□□□□□ -0.33
DHFR-205ENST00000511032 MROH5Q6ZUA9 1318 aa12.98□□□□□ -0.33
DHFR-205ENST00000511032 HCLS1P14317 486 aaPredicted RBP12.98□□□□□ -0.33
DHFR-205ENST00000511032 METTL24Q5JXM2 366 aa12.98□□□□□ -0.33
DHFR-205ENST00000511032 GORABQ5T7V8 394 aa12.98□□□□□ -0.33
DHFR-205ENST00000511032 REM2Q8IYK8 340 aaPredicted RBP12.98□□□□□ -0.33
DHFR-205ENST00000511032 PI4K2BQ8TCG2 481 aa12.98□□□□□ -0.33
DHFR-205ENST00000511032 RUFY2Q8WXA3 655 aa12.98□□□□□ -0.33
DHFR-205ENST00000511032 EVI5LQ96CN4 794 aa12.98□□□□□ -0.33
DHFR-205ENST00000511032 NLRP3Q96P20 1036 aa12.98□□□□□ -0.33
DHFR-205ENST00000511032 CCDC85AQ96PX6 553 aaPredicted RBP12.98□□□□□ -0.33
DHFR-205ENST00000511032 CCDC8Q9H0W5 538 aaPredicted RBP12.98□□□□□ -0.33
DHFR-205ENST00000511032 SRP68Q9UHB9 627 aaKnown RBP12.98□□□□□ -0.33
DHFR-205ENST00000511032 DDX60Q8IY21 1712 aaKnown RBP12.98□□□□□ -0.33
DHFR-205ENST00000511032 TUBGCP6Q96RT7 1819 aa12.98□□□□□ -0.33
DHFR-205ENST00000511032 POTEAQ6S8J7 498 aa12.97□□□□□ -0.33
DHFR-205ENST00000511032 ZNF594Q96JF6 807 aaPredicted RBP12.97□□□□□ -0.33
DHFR-205ENST00000511032 NEUROD6Q96NK8 337 aa12.97□□□□□ -0.33
DHFR-205ENST00000511032 C22orf23Q9BZE7 217 aa12.97□□□□□ -0.33
DHFR-205ENST00000511032 TFCP2L1Q9NZI6 479 aa12.97□□□□□ -0.33
DHFR-205ENST00000511032 TNS1Q9HBL0 1735 aaKnown RBP12.97□□□□□ -0.33
DHFR-205ENST00000511032 LRRFIP1Q32MZ4 808 aaKnown RBP12.97□□□□□ -0.33
DHFR-205ENST00000511032 CCDC158Q5M9N0 1113 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms