RNA–Protein interactions for RNA: ENST00000510362.5

RETREG1-206, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best)

Gene RETREG1, Length 1,054 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-206ENST00000510362 CARD14Q9BXL6 1004 aa12.41□□□□□ -0.42
RETREG1-206ENST00000510362 GGNBP2Q9H3C7 697 aa12.41□□□□□ -0.42
RETREG1-206ENST00000510362 CD2BP2O95400 341 aaKnown RBP12.4□□□□□ -0.42
RETREG1-206ENST00000510362 ZBTB33Q86T24 672 aa12.4□□□□□ -0.42
RETREG1-206ENST00000510362 CDCA7Q9BWT1 371 aaPredicted RBP12.4□□□□□ -0.42
RETREG1-206ENST00000510362 ALG2Q9H553 416 aa12.4□□□□□ -0.42
RETREG1-206ENST00000510362 SOX11P35716 441 aa12.39□□□□□ -0.43
RETREG1-206ENST00000510362 PDE3BQ13370 1112 aa12.39□□□□□ -0.43
RETREG1-206ENST00000510362 SF3B2Q13435 895 aaKnown RBP12.39□□□□□ -0.43
RETREG1-206ENST00000510362 ANKRD24Q8TF21 1146 aa12.39□□□□□ -0.43
RETREG1-206ENST00000510362 IP6K1Q92551 441 aa12.39□□□□□ -0.43
RETREG1-206ENST00000510362 CALR3Q96L12 384 aaKnown RBP12.39□□□□□ -0.43
RETREG1-206ENST00000510362 KIF24Q5T7B8 1368 aa12.39□□□□□ -0.43
RETREG1-206ENST00000510362 MAP3K19Q56UN5 1328 aa12.38□□□□□ -0.43
RETREG1-206ENST00000510362 SMG6Q86US8 1419 aaKnown RBP12.38□□□□□ -0.43
RETREG1-206ENST00000510362 TNS1Q9HBL0 1735 aaKnown RBP12.38□□□□□ -0.43
RETREG1-206ENST00000510362 C11orf95C9JLR9 678 aaPredicted RBP12.38□□□□□ -0.43
RETREG1-206ENST00000510362 HDGFL1Q5TGJ6 251 aa12.38□□□□□ -0.43
RETREG1-206ENST00000510362 NSD2O96028 1365 aa12.38□□□□□ -0.43
RETREG1-206ENST00000510362 DISP2A7MBM2 1401 aa12.37□□□□□ -0.43
RETREG1-206ENST00000510362 HOXC9P31274 260 aa12.37□□□□□ -0.43
RETREG1-206ENST00000510362 AMPHP49418 695 aa12.37□□□□□ -0.43
RETREG1-206ENST00000510362 ERFEQ4G0M1 354 aa12.37□□□□□ -0.43
RETREG1-206ENST00000510362 PEAK1Q9H792 1746 aa12.37□□□□□ -0.43
RETREG1-206ENST00000510362 OVOS2A0A0G2JMS6 1433 aa12.37□□□□□ -0.43
RETREG1-206ENST00000510362 KIF7Q2M1P5 1343 aa12.37□□□□□ -0.43
RETREG1-206ENST00000510362 FLT4P35916 1363 aa12.36□□□□□ -0.43
RETREG1-206ENST00000510362 SEMA3FQ13275 785 aa12.36□□□□□ -0.43
RETREG1-206ENST00000510362 DDB1Q16531 1140 aa12.36□□□□□ -0.43
RETREG1-206ENST00000510362 FAM196AQ6ZSG2 479 aa12.36□□□□□ -0.43
RETREG1-206ENST00000510362 C1QTNF2Q9BXJ5 285 aa12.36□□□□□ -0.43
RETREG1-206ENST00000510362 PANK3Q9H999 370 aa12.36□□□□□ -0.43
RETREG1-206ENST00000510362 NLRP2Q9NX02 1062 aa12.36□□□□□ -0.43
RETREG1-206ENST00000510362 PCDHB9Q9Y5E1 797 aa12.36□□□□□ -0.43
RETREG1-206ENST00000510362 MAP2P11137 1827 aaKnown RBP12.36□□□□□ -0.43
RETREG1-206ENST00000510362 TNS2Q63HR2 1409 aa12.36□□□□□ -0.43
RETREG1-206ENST00000510362 RRS1Q15050 365 aaKnown RBP12.35□□□□□ -0.43
RETREG1-206ENST00000510362 SPRYD7Q5W111 196 aa12.35□□□□□ -0.43
RETREG1-206ENST00000510362 CCDC82Q8N4S0 544 aa12.35□□□□□ -0.43
RETREG1-206ENST00000510362 PRKD2Q9BZL6 878 aa12.35□□□□□ -0.43
RETREG1-206ENST00000510362 INSRP06213 1382 aa12.34□□□□□ -0.43
RETREG1-206ENST00000510362 RGPD2P0DJD1 1756 aa12.34□□□□□ -0.43
RETREG1-206ENST00000510362 VARSP26640 1264 aaKnown RBP12.34□□□□□ -0.43
RETREG1-206ENST00000510362 FAM182BQ5T319 152 aa12.34□□□□□ -0.43
RETREG1-206ENST00000510362 RC3H1Q5TC82 1133 aaKnown RBP12.34□□□□□ -0.43
RETREG1-206ENST00000510362 SBF2Q86WG5 1849 aa12.34□□□□□ -0.43
RETREG1-206ENST00000510362 BAG6P46379 1132 aa12.33□□□□□ -0.44
RETREG1-206ENST00000510362 EHBP1Q8NDI1 1231 aa12.33□□□□□ -0.44
RETREG1-206ENST00000510362 KNSTRNQ9Y448 316 aa12.33□□□□□ -0.44
RETREG1-206ENST00000510362 BCL9O00512 1426 aa12.32□□□□□ -0.44
RETREG1-206ENST00000510362 EXOC5O00471 708 aa12.32□□□□□ -0.44
RETREG1-206ENST00000510362 IL2RBP14784 551 aa12.32□□□□□ -0.44
RETREG1-206ENST00000510362 FBLN1P23142 703 aa12.32□□□□□ -0.44
RETREG1-206ENST00000510362 DZIP3Q86Y13 1208 aaKnown RBP12.32□□□□□ -0.44
RETREG1-206ENST00000510362 TRMT44Q8IYL2 757 aaKnown RBP12.32□□□□□ -0.44
RETREG1-206ENST00000510362 LTV1Q96GA3 475 aaPredicted RBP12.32□□□□□ -0.44
RETREG1-206ENST00000510362 V9GY48 417 aaPredicted RBP12.32□□□□□ -0.44
RETREG1-206ENST00000510362 RGPD3A6NKT7 1758 aaPredicted RBP12.32□□□□□ -0.44
RETREG1-206ENST00000510362 RGPD4Q7Z3J3 1758 aa12.32□□□□□ -0.44
RETREG1-206ENST00000510362 MCCD1P59942 119 aaPredicted RBP12.31□□□□□ -0.44
RETREG1-206ENST00000510362 ZNF697Q5TEC3 545 aa12.31□□□□□ -0.44
RETREG1-206ENST00000510362 ZNF598Q86UK7 904 aaKnown RBP12.31□□□□□ -0.44
RETREG1-206ENST00000510362 ZNF592Q92610 1267 aa12.31□□□□□ -0.44
RETREG1-206ENST00000510362 SLC10A4Q96EP9 437 aa12.31□□□□□ -0.44
RETREG1-206ENST00000510362 FAM174AQ8TBP5 190 aa12.3□□□□□ -0.44
RETREG1-206ENST00000510362 CCDC97Q96F63 343 aaPredicted RBP12.3□□□□□ -0.44
RETREG1-206ENST00000510362 UCN2Q96RP3 112 aa12.3□□□□□ -0.44
RETREG1-206ENST00000510362 ARID3AQ99856 593 aa12.3□□□□□ -0.44
RETREG1-206ENST00000510362 EMILIN1Q9Y6C2 1016 aa12.3□□□□□ -0.44
RETREG1-206ENST00000510362 WASHC2AQ641Q2 1341 aa12.3□□□□□ -0.44
RETREG1-206ENST00000510362 PARD3Q8TEW0 1356 aa12.3□□□□□ -0.44
RETREG1-206ENST00000510362 NHSQ6T4R5 1651 aa12.29□□□□□ -0.44
RETREG1-206ENST00000510362 WNT7AO00755 349 aa12.29□□□□□ -0.44
RETREG1-206ENST00000510362 TRIM37O94972 964 aa12.29□□□□□ -0.44
RETREG1-206ENST00000510362 HSP90AB2PQ58FF8 381 aa12.29□□□□□ -0.44
RETREG1-206ENST00000510362 DEFB132Q7Z7B7 95 aa12.29□□□□□ -0.44
RETREG1-206ENST00000510362 CEP126Q9P2H0 1117 aa12.29□□□□□ -0.44
RETREG1-206ENST00000510362 SERPINA10Q9UK55 444 aa12.29□□□□□ -0.44
RETREG1-206ENST00000510362 RREB1Q92766 1687 aa12.29□□□□□ -0.44
RETREG1-206ENST00000510362 MORC1Q86VD1 984 aa12.28□□□□□ -0.44
RETREG1-206ENST00000510362 MARCH10Q8NA82 808 aaPredicted RBP12.28□□□□□ -0.44
RETREG1-206ENST00000510362 POLKQ9UBT6 870 aa12.28□□□□□ -0.44
RETREG1-206ENST00000510362 SHANK3Q9BYB0 1731 aa12.28□□□□□ -0.44
RETREG1-206ENST00000510362 PPM1GO15355 546 aaPredicted RBP12.27□□□□□ -0.45
RETREG1-206ENST00000510362 TNNT2P45379 298 aaPredicted RBP12.27□□□□□ -0.45
RETREG1-206ENST00000510362 MRGPRX2Q96LB1 330 aa12.27□□□□□ -0.45
RETREG1-206ENST00000510362 NCAPD2Q15021 1401 aa12.27□□□□□ -0.45
RETREG1-206ENST00000510362 MEGF6O75095 1541 aa12.27□□□□□ -0.45
RETREG1-206ENST00000510362 SIAH2O43255 324 aa12.26□□□□□ -0.45
RETREG1-206ENST00000510362 APBA3O96018 575 aa12.26□□□□□ -0.45
RETREG1-206ENST00000510362 NBPF6Q5VWK0 638 aa12.26□□□□□ -0.45
RETREG1-206ENST00000510362 RAPGEF4Q8WZA2 1011 aa12.26□□□□□ -0.45
RETREG1-206ENST00000510362 NBPF4Q96M43 638 aa12.26□□□□□ -0.45
RETREG1-206ENST00000510362 NPC1L1Q9UHC9 1359 aa12.26□□□□□ -0.45
RETREG1-206ENST00000510362 PKD1L3Q7Z443 1732 aa12.25□□□□□ -0.45
RETREG1-206ENST00000510362 PIK3CDO00329 1044 aa12.25□□□□□ -0.45
RETREG1-206ENST00000510362 PKD2L1Q9P0L9 805 aa12.25□□□□□ -0.45
RETREG1-206ENST00000510362 CDV3Q9UKY7 258 aaKnown RBP12.25□□□□□ -0.45
RETREG1-206ENST00000510362 TLL2Q9Y6L7 1015 aa12.25□□□□□ -0.45
RETREG1-206ENST00000510362 NUP188Q5SRE5 1749 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms