RNA–Protein interactions for RNA: ENST00000509712.5

CCDC30-213, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-213ENST00000509712 ANKRD33BA6NCL7 494 aa6.54□□□□□ -1.36
CCDC30-213ENST00000509712 H7C1W4 665 aa6.54□□□□□ -1.36
CCDC30-213ENST00000509712 TREHO43280 583 aa6.54□□□□□ -1.36
CCDC30-213ENST00000509712 IRX6P78412 446 aaPredicted RBP6.54□□□□□ -1.36
CCDC30-213ENST00000509712 DNM1Q05193 864 aaKnown RBP6.54□□□□□ -1.36
CCDC30-213ENST00000509712 TNP2Q05952 138 aa6.54□□□□□ -1.36
CCDC30-213ENST00000509712 DSC3Q14574 896 aa6.54□□□□□ -1.36
CCDC30-213ENST00000509712 FIGNL1Q6PIW4 674 aa6.54□□□□□ -1.36
CCDC30-213ENST00000509712 ALKBH8Q96BT7 664 aaKnown RBP6.54□□□□□ -1.36
CCDC30-213ENST00000509712 GGNBP2Q9H3C7 697 aa6.54□□□□□ -1.36
CCDC30-213ENST00000509712 BRD7Q9NPI1 651 aa6.54□□□□□ -1.36
CCDC30-213ENST00000509712 RTCBQ9Y3I0 505 aaKnown RBP6.54□□□□□ -1.36
CCDC30-213ENST00000509712 PCDHGC4Q9Y5F7 938 aa6.54□□□□□ -1.36
CCDC30-213ENST00000509712 ATXN7O15265 892 aaPredicted RBP6.53□□□□□ -1.36
CCDC30-213ENST00000509712 BNIP3LO60238 219 aa6.53□□□□□ -1.36
CCDC30-213ENST00000509712 AXDND1Q5T1B0 1012 aaPredicted RBP6.53□□□□□ -1.36
CCDC30-213ENST00000509712 NANOS1Q8WY41 292 aaKnown RBP6.53□□□□□ -1.36
CCDC30-213ENST00000509712 CEP63Q96MT8 703 aa6.53□□□□□ -1.36
CCDC30-213ENST00000509712 FAM13BQ9NYF5 915 aa6.53□□□□□ -1.36
CCDC30-213ENST00000509712 GJA3Q9Y6H8 435 aa6.53□□□□□ -1.36
CCDC30-213ENST00000509712 DCDC2BA2VCK2 349 aa6.52□□□□□ -1.36
CCDC30-213ENST00000509712 EGFRP00533 1210 aa6.52□□□□□ -1.36
CCDC30-213ENST00000509712 USP5P45974 858 aa6.52□□□□□ -1.36
CCDC30-213ENST00000509712 FMR1Q06787 632 aaKnown RBP eCLIP6.52□□□□□ -1.36
CCDC30-213ENST00000509712 FOXD4L4Q8WXT5 416 aaPredicted RBP6.52□□□□□ -1.36
CCDC30-213ENST00000509712 ZNF622Q969S3 477 aaKnown RBP eCLIP6.52□□□□□ -1.36
CCDC30-213ENST00000509712 NEUROD4Q9HD90 331 aa6.52□□□□□ -1.36
CCDC30-213ENST00000509712 C11orf16Q9NQ32 467 aa6.52□□□□□ -1.36
CCDC30-213ENST00000509712 STRN4Q9NRL3 753 aa6.52□□□□□ -1.36
CCDC30-213ENST00000509712 ERBB4Q15303 1308 aa6.52□□□□□ -1.37
CCDC30-213ENST00000509712 CDC14CA4D256 554 aa6.52□□□□□ -1.37
CCDC30-213ENST00000509712 A6NHS1 94 aa6.52□□□□□ -1.37
CCDC30-213ENST00000509712 VSIG8P0DPA2 414 aa6.52□□□□□ -1.37
CCDC30-213ENST00000509712 MAPTP10636 758 aaKnown RBP6.52□□□□□ -1.37
CCDC30-213ENST00000509712 SFSWAPQ12872 951 aaKnown RBP6.52□□□□□ -1.37
CCDC30-213ENST00000509712 LAMC2Q13753 1193 aa6.52□□□□□ -1.37
CCDC30-213ENST00000509712 COL19A1Q14993 1142 aa6.52□□□□□ -1.37
CCDC30-213ENST00000509712 FBXO33Q7Z6M2 555 aa6.52□□□□□ -1.37
CCDC30-213ENST00000509712 ZSCAN29Q8IWY8 852 aaPredicted RBP6.52□□□□□ -1.37
CCDC30-213ENST00000509712 VWA5B2Q8N398 1253 aa6.52□□□□□ -1.37
CCDC30-213ENST00000509712 ZSCAN1Q8NBB4 408 aa6.52□□□□□ -1.37
CCDC30-213ENST00000509712 PIK3R5Q8WYR1 880 aa6.52□□□□□ -1.37
CCDC30-213ENST00000509712 DMRTB1Q96MA1 342 aa6.52□□□□□ -1.37
CCDC30-213ENST00000509712 AMOTL2Q9Y2J4 779 aa6.52□□□□□ -1.37
CCDC30-213ENST00000509712 WASHC2AQ641Q2 1341 aa6.51□□□□□ -1.37
CCDC30-213ENST00000509712 HSP90AA1P07900 732 aaKnown RBP6.51□□□□□ -1.37
CCDC30-213ENST00000509712 ANP32AP39687 249 aaKnown RBP6.51□□□□□ -1.37
CCDC30-213ENST00000509712 MMP14P50281 582 aa6.51□□□□□ -1.37
CCDC30-213ENST00000509712 GRIN2CQ14957 1233 aa6.51□□□□□ -1.37
CCDC30-213ENST00000509712 XKR5Q6UX68 686 aa6.51□□□□□ -1.37
CCDC30-213ENST00000509712 GTPBP3Q969Y2 492 aaKnown RBP6.51□□□□□ -1.37
CCDC30-213ENST00000509712 ABHD17AQ96GS6 310 aa6.51□□□□□ -1.37
CCDC30-213ENST00000509712 ATXN7L1Q9ULK2 861 aaPredicted RBP6.51□□□□□ -1.37
CCDC30-213ENST00000509712 KHNYNO15037 678 aaKnown RBP6.5□□□□□ -1.37
CCDC30-213ENST00000509712 EPB42P16452 691 aa6.5□□□□□ -1.37
CCDC30-213ENST00000509712 GMPRP36959 345 aa6.5□□□□□ -1.37
CCDC30-213ENST00000509712 PDE3BQ13370 1112 aa6.5□□□□□ -1.37
CCDC30-213ENST00000509712 SV2AQ7L0J3 742 aa6.5□□□□□ -1.37
CCDC30-213ENST00000509712 GPR161Q8N6U8 529 aaKnown RBP6.5□□□□□ -1.37
CCDC30-213ENST00000509712 RPLP1P05386 114 aaKnown RBP6.49□□□□□ -1.37
CCDC30-213ENST00000509712 P4HBP07237 508 aaKnown RBP6.49□□□□□ -1.37
CCDC30-213ENST00000509712 FAM193AP78312 1265 aa6.49□□□□□ -1.37
CCDC30-213ENST00000509712 EHHADHQ08426 723 aa6.49□□□□□ -1.37
CCDC30-213ENST00000509712 FAM182BQ5T319 152 aa6.49□□□□□ -1.37
CCDC30-213ENST00000509712 PDE12Q6L8Q7 609 aaKnown RBP6.49□□□□□ -1.37
CCDC30-213ENST00000509712 CMTR1Q8N1G2 835 aaKnown RBP6.49□□□□□ -1.37
CCDC30-213ENST00000509712 CFHR5Q9BXR6 569 aa6.49□□□□□ -1.37
CCDC30-213ENST00000509712 KCNH4Q9UQ05 1017 aa6.49□□□□□ -1.37
CCDC30-213ENST00000509712 RBM47A0AV96 593 aaKnown RBP6.48□□□□□ -1.37
CCDC30-213ENST00000509712 GPR25O00155 361 aa6.48□□□□□ -1.37
CCDC30-213ENST00000509712 XP32Q5T750 250 aa6.48□□□□□ -1.37
CCDC30-213ENST00000509712 IRF7Q92985 503 aa6.48□□□□□ -1.37
CCDC30-213ENST00000509712 TRIM44Q96DX7 344 aaPredicted RBP6.48□□□□□ -1.37
CCDC30-213ENST00000509712 GSX2Q9BZM3 304 aa6.48□□□□□ -1.37
CCDC30-213ENST00000509712 NOP58Q9Y2X3 529 aaKnown RBP6.48□□□□□ -1.37
CCDC30-213ENST00000509712 UBAP1LF5GYI3 381 aa6.48□□□□□ -1.37
CCDC30-213ENST00000509712 XYLBO75191 536 aa6.48□□□□□ -1.37
CCDC30-213ENST00000509712 PCSK2P16519 638 aa6.48□□□□□ -1.37
CCDC30-213ENST00000509712 CD33P20138 364 aa6.48□□□□□ -1.37
CCDC30-213ENST00000509712 GAS6Q14393 721 aa6.48□□□□□ -1.37
CCDC30-213ENST00000509712 SLC30A3Q99726 388 aa6.48□□□□□ -1.37
CCDC30-213ENST00000509712 PDCL3Q9H2J4 239 aa6.48□□□□□ -1.37
CCDC30-213ENST00000509712 MARK1Q9P0L2 795 aa6.48□□□□□ -1.37
CCDC30-213ENST00000509712 TMEM63CQ9P1W3 806 aa6.48□□□□□ -1.37
CCDC30-213ENST00000509712 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.47□□□□□ -1.37
CCDC30-213ENST00000509712 TNFRSF21O75509 655 aa6.47□□□□□ -1.37
CCDC30-213ENST00000509712 FGFR3P22607 806 aa6.47□□□□□ -1.37
CCDC30-213ENST00000509712 TAGLNQ01995 201 aaKnown RBP6.47□□□□□ -1.37
CCDC30-213ENST00000509712 ORC1Q13415 861 aa6.47□□□□□ -1.37
CCDC30-213ENST00000509712 C8orf34Q49A92 452 aa6.47□□□□□ -1.37
CCDC30-213ENST00000509712 DNAJC2Q99543 621 aaKnown RBP6.47□□□□□ -1.37
CCDC30-213ENST00000509712 NIF3L1Q9GZT8 377 aa6.47□□□□□ -1.37
CCDC30-213ENST00000509712 CHRDQ9H2X0 955 aa6.47□□□□□ -1.37
CCDC30-213ENST00000509712 PRDM10Q9NQV6 1147 aa6.47□□□□□ -1.37
CCDC30-213ENST00000509712 ZFATQ9P243 1243 aa6.47□□□□□ -1.37
CCDC30-213ENST00000509712 FNDC3AQ9Y2H6 1198 aaKnown RBP6.47□□□□□ -1.37
CCDC30-213ENST00000509712 C2CD2LO14523 706 aa6.46□□□□□ -1.38
CCDC30-213ENST00000509712 LORP23490 312 aaPredicted RBP6.46□□□□□ -1.38
CCDC30-213ENST00000509712 CTBSQ01459 385 aa6.46□□□□□ -1.38
CCDC30-213ENST00000509712 SPEM2Q0P670 501 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms