RNA–Protein interactions for RNA: ENST00000509518.1

CHRNA9-203, Transcript of cholinergic receptor nicotinic alpha 9 subunit, humanhuman

TSL 3

Gene CHRNA9, Length 465 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9-203ENST00000509518 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.16□□□□□ -0.62
CHRNA9-203ENST00000509518 H3BQV1 296 aa11.15□□□□□ -0.62
CHRNA9-203ENST00000509518 PNMA6AP0CW24 399 aaPredicted RBP11.15□□□□□ -0.62
CHRNA9-203ENST00000509518 SFPQP23246 707 aaKnown RBP eCLIP11.15□□□□□ -0.62
CHRNA9-203ENST00000509518 RPS6KB1P23443 525 aa11.15□□□□□ -0.62
CHRNA9-203ENST00000509518 RESTQ13127 1097 aa11.15□□□□□ -0.62
CHRNA9-203ENST00000509518 OS9Q13438 667 aaPredicted RBP11.15□□□□□ -0.62
CHRNA9-203ENST00000509518 NECTIN1Q15223 517 aa11.15□□□□□ -0.62
CHRNA9-203ENST00000509518 ME3Q16798 604 aa11.15□□□□□ -0.62
CHRNA9-203ENST00000509518 IFFO2Q5TF58 517 aa11.15□□□□□ -0.62
CHRNA9-203ENST00000509518 NUTM2DQ5VT03 806 aaPredicted RBP11.15□□□□□ -0.62
CHRNA9-203ENST00000509518 CREB3L3Q68CJ9 461 aa11.15□□□□□ -0.62
CHRNA9-203ENST00000509518 PRPF40BQ6NWY9 871 aaKnown RBP11.15□□□□□ -0.62
CHRNA9-203ENST00000509518 G2E3Q7L622 706 aa11.15□□□□□ -0.62
CHRNA9-203ENST00000509518 UBXN4Q92575 508 aa11.15□□□□□ -0.62
CHRNA9-203ENST00000509518 NUDT16Q96DE0 195 aaKnown RBP11.15□□□□□ -0.62
CHRNA9-203ENST00000509518 RASSF4Q9H2L5 321 aa11.15□□□□□ -0.62
CHRNA9-203ENST00000509518 YY1AP1Q9H869 796 aa11.15□□□□□ -0.62
CHRNA9-203ENST00000509518 RBM8AQ9Y5S9 174 aaKnown RBP11.15□□□□□ -0.62
CHRNA9-203ENST00000509518 NCAPD2Q15021 1401 aa11.15□□□□□ -0.62
CHRNA9-203ENST00000509518 MED23Q9ULK4 1368 aa11.15□□□□□ -0.63
CHRNA9-203ENST00000509518 SPEF2Q9C093 1822 aa11.14□□□□□ -0.63
CHRNA9-203ENST00000509518 IGSF1Q8N6C5 1336 aa11.14□□□□□ -0.63
CHRNA9-203ENST00000509518 EFCAB8A8MWE9 144 aa11.14□□□□□ -0.63
CHRNA9-203ENST00000509518 POTEB2H3BUK9 544 aa11.14□□□□□ -0.63
CHRNA9-203ENST00000509518 ZSCAN12O43309 604 aa11.14□□□□□ -0.63
CHRNA9-203ENST00000509518 IVLP07476 585 aa11.14□□□□□ -0.63
CHRNA9-203ENST00000509518 FAM160A1Q05DH4 1040 aa11.14□□□□□ -0.63
CHRNA9-203ENST00000509518 PSME1Q06323 249 aa11.14□□□□□ -0.63
CHRNA9-203ENST00000509518 RRS1Q15050 365 aaKnown RBP11.14□□□□□ -0.63
CHRNA9-203ENST00000509518 CAMK4Q16566 473 aa11.14□□□□□ -0.63
CHRNA9-203ENST00000509518 LRRFIP1Q32MZ4 808 aaKnown RBP11.14□□□□□ -0.63
CHRNA9-203ENST00000509518 CCDC144BQ3MJ40 725 aa11.14□□□□□ -0.63
CHRNA9-203ENST00000509518 CWC27Q6UX04 472 aaKnown RBP11.14□□□□□ -0.63
CHRNA9-203ENST00000509518 PPP1R42Q7Z4L9 355 aa11.14□□□□□ -0.63
CHRNA9-203ENST00000509518 NUTM1Q86Y26 1132 aa11.14□□□□□ -0.63
CHRNA9-203ENST00000509518 CCDC144CPQ8IYA2 1237 aa11.14□□□□□ -0.63
CHRNA9-203ENST00000509518 RGS22Q8NE09 1264 aa11.14□□□□□ -0.63
CHRNA9-203ENST00000509518 NRBP1Q9UHY1 535 aa11.14□□□□□ -0.63
CHRNA9-203ENST00000509518 STAG3Q9UJ98 1225 aa11.14□□□□□ -0.63
CHRNA9-203ENST00000509518 OVOS2A0A0G2JMS6 1433 aa11.14□□□□□ -0.63
CHRNA9-203ENST00000509518 ERBB3P21860 1342 aa11.13□□□□□ -0.63
CHRNA9-203ENST00000509518 ERICH4A6NGS2 130 aa11.13□□□□□ -0.63
CHRNA9-203ENST00000509518 SRGAP3O43295 1099 aa11.13□□□□□ -0.63
CHRNA9-203ENST00000509518 HMGB1P09429 215 aaKnown RBP11.13□□□□□ -0.63
CHRNA9-203ENST00000509518 IFIT2P09913 472 aaKnown RBP11.13□□□□□ -0.63
CHRNA9-203ENST00000509518 CCDC93Q567U6 631 aa11.13□□□□□ -0.63
CHRNA9-203ENST00000509518 TAF7LQ5H9L4 462 aa11.13□□□□□ -0.63
CHRNA9-203ENST00000509518 WAPLQ7Z5K2 1190 aa11.13□□□□□ -0.63
CHRNA9-203ENST00000509518 CCAR1Q8IX12 1150 aaKnown RBP11.13□□□□□ -0.63
CHRNA9-203ENST00000509518 MSL3Q8N5Y2 521 aaKnown RBP11.13□□□□□ -0.63
CHRNA9-203ENST00000509518 MAP4K1Q92918 833 aa11.13□□□□□ -0.63
CHRNA9-203ENST00000509518 GTF3C6Q969F1 213 aa11.13□□□□□ -0.63
CHRNA9-203ENST00000509518 DDX11Q96FC9 970 aa11.13□□□□□ -0.63
CHRNA9-203ENST00000509518 PPP1R13BQ96KQ4 1090 aa11.13□□□□□ -0.63
CHRNA9-203ENST00000509518 MPHOSPH8Q99549 860 aa11.13□□□□□ -0.63
CHRNA9-203ENST00000509518 USP44Q9H0E7 712 aa11.13□□□□□ -0.63
CHRNA9-203ENST00000509518 IL1RAPL2Q9NP60 686 aa11.13□□□□□ -0.63
CHRNA9-203ENST00000509518 FHOD1Q9Y613 1164 aa11.13□□□□□ -0.63
CHRNA9-203ENST00000509518 NPHP4O75161 1426 aaPredicted RBP11.12□□□□□ -0.63
CHRNA9-203ENST00000509518 SLC27A2O14975 620 aa11.12□□□□□ -0.63
CHRNA9-203ENST00000509518 IGSF3O75054 1194 aa11.12□□□□□ -0.63
CHRNA9-203ENST00000509518 NR1I2O75469 434 aa11.12□□□□□ -0.63
CHRNA9-203ENST00000509518 EIF3JO75822 258 aaKnown RBP11.12□□□□□ -0.63
CHRNA9-203ENST00000509518 ALDH1L1O75891 902 aa11.12□□□□□ -0.63
CHRNA9-203ENST00000509518 ZRANB2O95218 330 aaKnown RBP eCLIP11.12□□□□□ -0.63
CHRNA9-203ENST00000509518 TNNT3P45378 269 aaPredicted RBP11.12□□□□□ -0.63
CHRNA9-203ENST00000509518 CLCN6P51797 869 aa11.12□□□□□ -0.63
CHRNA9-203ENST00000509518 HDGFP51858 240 aaKnown RBP11.12□□□□□ -0.63
CHRNA9-203ENST00000509518 ETF1P62495 437 aaKnown RBP11.12□□□□□ -0.63
CHRNA9-203ENST00000509518 ST3GAL1Q11201 340 aa11.12□□□□□ -0.63
CHRNA9-203ENST00000509518 TUBB2AQ13885 445 aa11.12□□□□□ -0.63
CHRNA9-203ENST00000509518 ARHGAP29Q52LW3 1261 aa11.12□□□□□ -0.63
CHRNA9-203ENST00000509518 IQUBQ8NA54 791 aa11.12□□□□□ -0.63
CHRNA9-203ENST00000509518 GOLGA5Q8TBA6 731 aa11.12□□□□□ -0.63
CHRNA9-203ENST00000509518 EXOC4Q96A65 974 aa11.12□□□□□ -0.63
CHRNA9-203ENST00000509518 TUBB2BQ9BVA1 445 aa11.12□□□□□ -0.63
CHRNA9-203ENST00000509518 IL25Q9H293 177 aa11.12□□□□□ -0.63
CHRNA9-203ENST00000509518 ORC3Q9UBD5 711 aaPredicted RBP11.12□□□□□ -0.63
CHRNA9-203ENST00000509518 TPCN1Q9ULQ1 816 aa11.12□□□□□ -0.63
CHRNA9-203ENST00000509518 SPG7Q9UQ90 795 aa11.12□□□□□ -0.63
CHRNA9-203ENST00000509518 LMTK3Q96Q04 1460 aa11.12□□□□□ -0.63
CHRNA9-203ENST00000509518 PIK3C2AO00443 1686 aa11.11□□□□□ -0.63
CHRNA9-203ENST00000509518 A0A1W2PQ27 194 aa11.11□□□□□ -0.63
CHRNA9-203ENST00000509518 A0A1W2PQ64 194 aa11.11□□□□□ -0.63
CHRNA9-203ENST00000509518 A0A1W2PQD8 194 aa11.11□□□□□ -0.63
CHRNA9-203ENST00000509518 GNAT3A8MTJ3 354 aa11.11□□□□□ -0.63
CHRNA9-203ENST00000509518 TUBBP07437 444 aa11.11□□□□□ -0.63
CHRNA9-203ENST00000509518 RAD51AP2Q09MP3 1159 aa11.11□□□□□ -0.63
CHRNA9-203ENST00000509518 GPR161Q8N6U8 529 aaKnown RBP11.11□□□□□ -0.63
CHRNA9-203ENST00000509518 ACBD3Q9H3P7 528 aa11.11□□□□□ -0.63
CHRNA9-203ENST00000509518 BRMS1Q9HCU9 246 aa11.11□□□□□ -0.63
CHRNA9-203ENST00000509518 ZNF446Q9NWS9 450 aa11.11□□□□□ -0.63
CHRNA9-203ENST00000509518 FEZ2Q9UHY8 353 aaPredicted RBP11.11□□□□□ -0.63
CHRNA9-203ENST00000509518 RCOR1Q9UKL0 485 aa11.11□□□□□ -0.63
CHRNA9-203ENST00000509518 U3KPZ7 1027 aaPredicted RBP11.11□□□□□ -0.63
CHRNA9-203ENST00000509518 MAP3K19Q56UN5 1328 aa11.1□□□□□ -0.63
CHRNA9-203ENST00000509518 PHRF1Q9P1Y6 1649 aaKnown RBP11.1□□□□□ -0.63
CHRNA9-203ENST00000509518 IKBKBO14920 756 aa11.1□□□□□ -0.63
CHRNA9-203ENST00000509518 TADA3O75528 432 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms