RNA–Protein interactions for RNA: ENST00000509517.1

OTUD4-207, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 617 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-207ENST00000509517 NCOA4Q13772 614 aa6.68□□□□□ -1.34
OTUD4-207ENST00000509517 CCINQ13939 588 aa6.68□□□□□ -1.34
OTUD4-207ENST00000509517 UBL7Q96S82 380 aaPredicted RBP6.68□□□□□ -1.34
OTUD4-207ENST00000509517 C1orf115Q9H7X2 142 aa6.68□□□□□ -1.34
OTUD4-207ENST00000509517 SUPT5HO00267 1087 aaKnown RBP6.67□□□□□ -1.34
OTUD4-207ENST00000509517 C21orf2O43822 256 aa6.67□□□□□ -1.34
OTUD4-207ENST00000509517 HFE2Q6ZVN8 426 aa6.67□□□□□ -1.34
OTUD4-207ENST00000509517 ZDHHC13Q8IUH4 622 aa6.67□□□□□ -1.34
OTUD4-207ENST00000509517 ALDH16A1Q8IZ83 802 aa6.67□□□□□ -1.34
OTUD4-207ENST00000509517 TMEM130Q8N3G9 435 aa6.67□□□□□ -1.34
OTUD4-207ENST00000509517 NFATC2IPQ8NCF5 419 aa6.67□□□□□ -1.34
OTUD4-207ENST00000509517 BCS1LQ9Y276 419 aa6.67□□□□□ -1.34
OTUD4-207ENST00000509517 RAXQ9Y2V3 346 aa6.67□□□□□ -1.34
OTUD4-207ENST00000509517 TARSP26639 723 aaKnown RBP6.66□□□□□ -1.34
OTUD4-207ENST00000509517 ELMSAN1Q6PJG2 1045 aa6.66□□□□□ -1.34
OTUD4-207ENST00000509517 KRT25Q7Z3Z0 450 aa6.66□□□□□ -1.34
OTUD4-207ENST00000509517 PNMA5Q96PV4 448 aa6.66□□□□□ -1.34
OTUD4-207ENST00000509517 FRRS1LQ9P0K9 344 aa6.66□□□□□ -1.34
OTUD4-207ENST00000509517 ADGRE2Q9UHX3 823 aa6.66□□□□□ -1.34
OTUD4-207ENST00000509517 DMGDHQ9UI17 866 aaKnown RBP6.66□□□□□ -1.34
OTUD4-207ENST00000509517 PRR19A6NJB7 356 aa6.65□□□□□ -1.34
OTUD4-207ENST00000509517 TPCN2Q8NHX9 752 aa6.65□□□□□ -1.34
OTUD4-207ENST00000509517 PPP1R12CQ9BZL4 782 aa6.65□□□□□ -1.34
OTUD4-207ENST00000509517 SMG9Q9H0W8 520 aaKnown RBP6.65□□□□□ -1.34
OTUD4-207ENST00000509517 PALM3A6NDB9 673 aaPredicted RBP6.64□□□□□ -1.35
OTUD4-207ENST00000509517 USP17L5A8MUK1 530 aa6.64□□□□□ -1.35
OTUD4-207ENST00000509517 ATP9BO43861 1147 aa6.64□□□□□ -1.35
OTUD4-207ENST00000509517 Q6ZS46 218 aa6.64□□□□□ -1.35
OTUD4-207ENST00000509517 ARMC10Q8N2F6 343 aa6.64□□□□□ -1.35
OTUD4-207ENST00000509517 TRPM4Q8TD43 1214 aa6.64□□□□□ -1.35
OTUD4-207ENST00000509517 TTC9Q92623 222 aa6.64□□□□□ -1.35
OTUD4-207ENST00000509517 IFT43Q96FT9 208 aa6.64□□□□□ -1.35
OTUD4-207ENST00000509517 KRTAP4-11Q9BYQ6 195 aa6.64□□□□□ -1.35
OTUD4-207ENST00000509517 EFCC1Q9HA90 598 aa6.64□□□□□ -1.35
OTUD4-207ENST00000509517 STOML1Q9UBI4 398 aa6.64□□□□□ -1.35
OTUD4-207ENST00000509517 CLDN10P78369 228 aa6.63□□□□□ -1.35
OTUD4-207ENST00000509517 OGFOD2Q6N063 350 aa6.63□□□□□ -1.35
OTUD4-207ENST00000509517 DHX32Q7L7V1 743 aaKnown RBP6.63□□□□□ -1.35
OTUD4-207ENST00000509517 CCDC82Q8N4S0 544 aa6.63□□□□□ -1.35
OTUD4-207ENST00000509517 TSEN2Q8NCE0 465 aaKnown RBP6.63□□□□□ -1.35
OTUD4-207ENST00000509517 GAS2L2Q8NHY3 880 aa6.63□□□□□ -1.35
OTUD4-207ENST00000509517 NGLY1Q96IV0 654 aa6.63□□□□□ -1.35
OTUD4-207ENST00000509517 MRPL18Q9H0U6 180 aaKnown RBP6.63□□□□□ -1.35
OTUD4-207ENST00000509517 TFIP11Q9UBB9 837 aaKnown RBP6.63□□□□□ -1.35
OTUD4-207ENST00000509517 SERPINA10Q9UK55 444 aa6.63□□□□□ -1.35
OTUD4-207ENST00000509517 MAFBQ9Y5Q3 323 aaPredicted RBP6.63□□□□□ -1.35
OTUD4-207ENST00000509517 USP17L3A6NCW0 530 aa6.62□□□□□ -1.35
OTUD4-207ENST00000509517 USP17L4A6NCW7 530 aa6.62□□□□□ -1.35
OTUD4-207ENST00000509517 PTCD1O75127 700 aaKnown RBP6.62□□□□□ -1.35
OTUD4-207ENST00000509517 GLB1P16278 677 aa6.62□□□□□ -1.35
OTUD4-207ENST00000509517 CFAP70Q5T0N1 1121 aa6.62□□□□□ -1.35
OTUD4-207ENST00000509517 CCDC102BQ68D86 513 aa6.62□□□□□ -1.35
OTUD4-207ENST00000509517 USP17L2Q6R6M4 530 aa6.62□□□□□ -1.35
OTUD4-207ENST00000509517 USP17L1Q7RTZ2 530 aa6.62□□□□□ -1.35
OTUD4-207ENST00000509517 DTX1Q86Y01 620 aa6.62□□□□□ -1.35
OTUD4-207ENST00000509517 PLEKHM2Q8IWE5 1019 aa6.62□□□□□ -1.35
OTUD4-207ENST00000509517 CCDC97Q96F63 343 aaPredicted RBP6.62□□□□□ -1.35
OTUD4-207ENST00000509517 J3QW42 95 aa6.61□□□□□ -1.35
OTUD4-207ENST00000509517 PPP1R12BO60237 982 aaPredicted RBP6.61□□□□□ -1.35
OTUD4-207ENST00000509517 LZTS3O60299 673 aaPredicted RBP6.61□□□□□ -1.35
OTUD4-207ENST00000509517 SASH3O75995 380 aa6.61□□□□□ -1.35
OTUD4-207ENST00000509517 MAP3K6O95382 1288 aa6.61□□□□□ -1.35
OTUD4-207ENST00000509517 SETDB1Q15047 1291 aa6.61□□□□□ -1.35
OTUD4-207ENST00000509517 HMX2A2RU54 273 aa6.6□□□□□ -1.35
OTUD4-207ENST00000509517 WNT11O96014 354 aa6.6□□□□□ -1.35
OTUD4-207ENST00000509517 NFIAQ12857 509 aa6.6□□□□□ -1.35
OTUD4-207ENST00000509517 GDF6Q6KF10 455 aaPredicted RBP6.6□□□□□ -1.35
OTUD4-207ENST00000509517 TRIM42Q8IWZ5 723 aa6.6□□□□□ -1.35
OTUD4-207ENST00000509517 C2orf49Q9BVC5 232 aaPredicted RBP6.6□□□□□ -1.35
OTUD4-207ENST00000509517 WISP1O95388 367 aa6.59□□□□□ -1.35
OTUD4-207ENST00000509517 LMOD1P29536 600 aaPredicted RBP6.59□□□□□ -1.35
OTUD4-207ENST00000509517 GPLD1P80108 840 aa6.59□□□□□ -1.35
OTUD4-207ENST00000509517 IL22RA1Q8N6P7 574 aa6.59□□□□□ -1.35
OTUD4-207ENST00000509517 C7orf69Q9H7B7 122 aa6.59□□□□□ -1.35
OTUD4-207ENST00000509517 CHMP3Q9Y3E7 222 aa6.59□□□□□ -1.35
OTUD4-207ENST00000509517 ATAD2Q6PL18 1390 aa6.58□□□□□ -1.36
OTUD4-207ENST00000509517 LGR5O75473 907 aa6.58□□□□□ -1.36
OTUD4-207ENST00000509517 DKK1O94907 266 aa6.58□□□□□ -1.36
OTUD4-207ENST00000509517 C8AP07357 584 aa6.58□□□□□ -1.36
OTUD4-207ENST00000509517 HOXA10P31260 410 aaPredicted RBP6.58□□□□□ -1.36
OTUD4-207ENST00000509517 INPP5BP32019 993 aa6.58□□□□□ -1.36
OTUD4-207ENST00000509517 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.58□□□□□ -1.36
OTUD4-207ENST00000509517 ABI1Q8IZP0 508 aa6.58□□□□□ -1.36
OTUD4-207ENST00000509517 GALNT11Q8NCW6 608 aa6.58□□□□□ -1.36
OTUD4-207ENST00000509517 GSC2O15499 205 aa6.57□□□□□ -1.36
OTUD4-207ENST00000509517 RARAP10276 462 aa6.57□□□□□ -1.36
OTUD4-207ENST00000509517 EIF2AK2P19525 551 aaKnown RBP6.57□□□□□ -1.36
OTUD4-207ENST00000509517 PCSK7Q16549 785 aa6.57□□□□□ -1.36
OTUD4-207ENST00000509517 IER5Q5VY09 327 aa6.57□□□□□ -1.36
OTUD4-207ENST00000509517 CHMP7Q8WUX9 453 aaPredicted RBP6.57□□□□□ -1.36
OTUD4-207ENST00000509517 PLD4Q96BZ4 506 aa6.57□□□□□ -1.36
OTUD4-207ENST00000509517 KCNK4Q9NYG8 393 aa6.57□□□□□ -1.36
OTUD4-207ENST00000509517 USP20Q9Y2K6 914 aa6.57□□□□□ -1.36
OTUD4-207ENST00000509517 TGFBR3LH3BV60 316 aa6.56□□□□□ -1.36
OTUD4-207ENST00000509517 RFX1P22670 979 aa6.56□□□□□ -1.36
OTUD4-207ENST00000509517 KANK4Q5T7N3 995 aaPredicted RBP6.56□□□□□ -1.36
OTUD4-207ENST00000509517 INTS5Q6P9B9 1019 aaKnown RBP6.56□□□□□ -1.36
OTUD4-207ENST00000509517 TRIM50Q86XT4 487 aa6.56□□□□□ -1.36
OTUD4-207ENST00000509517 SCG3Q8WXD2 468 aaKnown RBP6.56□□□□□ -1.36
OTUD4-207ENST00000509517 COL26A1Q96A83 441 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms