RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 NBPF14Q5TI25 921 aa13.08□□□□□ -0.32
SEC31A-228ENST00000509142 NBPF10Q6P3W6 841 aaKnown RBP13.08□□□□□ -0.32
SEC31A-228ENST00000509142 MPNDQ8N594 471 aa13.08□□□□□ -0.32
SEC31A-228ENST00000509142 NBPF15Q8N660 670 aa13.08□□□□□ -0.32
SEC31A-228ENST00000509142 VPS37CA5D8V6 355 aaPredicted RBP13.08□□□□□ -0.32
SEC31A-228ENST00000509142 HSP90AA2PQ14568 343 aaPredicted RBP13.08□□□□□ -0.32
SEC31A-228ENST00000509142 RABL6Q3YEC7 729 aaPredicted RBP13.08□□□□□ -0.32
SEC31A-228ENST00000509142 RFX5P48382 616 aaPredicted RBP13.07□□□□□ -0.32
SEC31A-228ENST00000509142 NECAB1Q8N987 351 aa13.07□□□□□ -0.32
SEC31A-228ENST00000509142 TCEANC2Q96MN5 208 aa13.07□□□□□ -0.32
SEC31A-228ENST00000509142 TMEM87AQ8NBN3 555 aa13.07□□□□□ -0.32
SEC31A-228ENST00000509142 PHF14O94880 888 aa13.06□□□□□ -0.32
SEC31A-228ENST00000509142 FGD1P98174 961 aa13.06□□□□□ -0.32
SEC31A-228ENST00000509142 ANKRD1Q15327 319 aa13.06□□□□□ -0.32
SEC31A-228ENST00000509142 DDX46Q7L014 1031 aaKnown RBP13.06□□□□□ -0.32
SEC31A-228ENST00000509142 TSPY26PQ9H489 355 aa13.06□□□□□ -0.32
SEC31A-228ENST00000509142 TMOD3Q9NYL9 352 aa13.06□□□□□ -0.32
SEC31A-228ENST00000509142 TAF6LQ9Y6J9 622 aa13.06□□□□□ -0.32
SEC31A-228ENST00000509142 FIBPO43427 364 aa13.06□□□□□ -0.32
SEC31A-228ENST00000509142 RRP9O43818 475 aaKnown RBP13.06□□□□□ -0.32
SEC31A-228ENST00000509142 CARD10Q9BWT7 1032 aa13.06□□□□□ -0.32
SEC31A-228ENST00000509142 R3HCC1Q9Y3T6 440 aaKnown RBP13.06□□□□□ -0.32
SEC31A-228ENST00000509142 ZNF589Q86UQ0 364 aaPredicted RBP13.06□□□□□ -0.32
SEC31A-228ENST00000509142 ADAMTS7Q9UKP4 1686 aa13.05□□□□□ -0.32
SEC31A-228ENST00000509142 H7C1W4 665 aa13.05□□□□□ -0.32
SEC31A-228ENST00000509142 F13A1P00488 732 aa13.05□□□□□ -0.32
SEC31A-228ENST00000509142 HMG20BQ9P0W2 317 aa13.05□□□□□ -0.32
SEC31A-228ENST00000509142 PLEKHG2Q9H7P9 1386 aa13.05□□□□□ -0.32
SEC31A-228ENST00000509142 TPM2P07951 284 aa13.05□□□□□ -0.32
SEC31A-228ENST00000509142 ME3Q16798 604 aa13.05□□□□□ -0.32
SEC31A-228ENST00000509142 C5P01031 1676 aa13.05□□□□□ -0.32
SEC31A-228ENST00000509142 CSPP1Q1MSJ5 1256 aa13.05□□□□□ -0.32
SEC31A-228ENST00000509142 GORABQ5T7V8 394 aa13.05□□□□□ -0.32
SEC31A-228ENST00000509142 LARP1BQ659C4 914 aaKnown RBP13.05□□□□□ -0.32
SEC31A-228ENST00000509142 KCNB2Q92953 911 aa13.05□□□□□ -0.32
SEC31A-228ENST00000509142 TIMM10P62072 90 aa13.04□□□□□ -0.32
SEC31A-228ENST00000509142 TAF7LQ5H9L4 462 aa13.04□□□□□ -0.32
SEC31A-228ENST00000509142 CCDC191Q8NCU4 936 aa13.04□□□□□ -0.32
SEC31A-228ENST00000509142 COL18A1P39060 1754 aa13.04□□□□□ -0.32
SEC31A-228ENST00000509142 STK3Q13188 491 aa13.04□□□□□ -0.32
SEC31A-228ENST00000509142 KRT32Q14532 448 aa13.04□□□□□ -0.32
SEC31A-228ENST00000509142 ZNF830Q96NB3 372 aaPredicted RBP13.04□□□□□ -0.32
SEC31A-228ENST00000509142 GOLIM4O00461 696 aa13.04□□□□□ -0.32
SEC31A-228ENST00000509142 AP5Z1O43299 807 aa13.04□□□□□ -0.32
SEC31A-228ENST00000509142 TAF5LO75529 589 aa13.04□□□□□ -0.32
SEC31A-228ENST00000509142 HSP90B1P14625 803 aaKnown RBP13.04□□□□□ -0.32
SEC31A-228ENST00000509142 IL15P40933 162 aaPredicted RBP13.04□□□□□ -0.32
SEC31A-228ENST00000509142 TPCN1Q9ULQ1 816 aa13.04□□□□□ -0.32
SEC31A-228ENST00000509142 CASP7P55210 303 aa13.03□□□□□ -0.32
SEC31A-228ENST00000509142 FOXO4P98177 505 aa13.03□□□□□ -0.32
SEC31A-228ENST00000509142 CCDC57Q2TAC2 916 aa13.03□□□□□ -0.32
SEC31A-228ENST00000509142 MCMDC2Q4G0Z9 681 aa13.03□□□□□ -0.32
SEC31A-228ENST00000509142 CCDC129Q6ZRS4 1044 aa13.03□□□□□ -0.32
SEC31A-228ENST00000509142 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.03□□□□□ -0.323e-7■■□□□ 13.8
SEC31A-228ENST00000509142 ZNF335Q9H4Z2 1342 aaPredicted RBP13.03□□□□□ -0.32
SEC31A-228ENST00000509142 RPS6KB1P23443 525 aa13.03□□□□□ -0.32
SEC31A-228ENST00000509142 RBM10P98175 930 aaKnown RBP13.03□□□□□ -0.32
SEC31A-228ENST00000509142 ZNF594Q96JF6 807 aaPredicted RBP13.03□□□□□ -0.32
SEC31A-228ENST00000509142 HAUS7Q99871 368 aa13.03□□□□□ -0.32
SEC31A-228ENST00000509142 MTMR6Q9Y217 621 aa13.03□□□□□ -0.32
SEC31A-228ENST00000509142 SOS2Q07890 1332 aaPredicted RBP13.03□□□□□ -0.32
SEC31A-228ENST00000509142 STRCP1A6NGW2 1772 aa13.03□□□□□ -0.32
SEC31A-228ENST00000509142 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.03□□□□□ -0.32
SEC31A-228ENST00000509142 KIF6Q6ZMV9 814 aa13.03□□□□□ -0.32
SEC31A-228ENST00000509142 CCDC85AQ96PX6 553 aaPredicted RBP13.03□□□□□ -0.32
SEC31A-228ENST00000509142 FUCA2Q9BTY2 467 aa13.03□□□□□ -0.32
SEC31A-228ENST00000509142 CEP126Q9P2H0 1117 aa13.03□□□□□ -0.32
SEC31A-228ENST00000509142 U3KPZ7 1027 aaPredicted RBP13.03□□□□□ -0.32
SEC31A-228ENST00000509142 MRC1P22897 1456 aa13.03□□□□□ -0.32
SEC31A-228ENST00000509142 KAT6BQ8WYB5 2073 aa13.03□□□□□ -0.32
SEC31A-228ENST00000509142 PDCP20941 246 aa13.02□□□□□ -0.32
SEC31A-228ENST00000509142 DNM1Q05193 864 aaKnown RBP13.02□□□□□ -0.32
SEC31A-228ENST00000509142 SEC62Q99442 399 aaKnown RBP13.02□□□□□ -0.32
SEC31A-228ENST00000509142 HCLS1P14317 486 aaPredicted RBP13.02□□□□□ -0.33
SEC31A-228ENST00000509142 USP25Q9UHP3 1055 aa13.02□□□□□ -0.33
SEC31A-228ENST00000509142 EYA2O00167 538 aa13.02□□□□□ -0.33
SEC31A-228ENST00000509142 NKX1-1Q15270 411 aaPredicted RBP13.02□□□□□ -0.33
SEC31A-228ENST00000509142 NEK1Q96PY6 1258 aa13.02□□□□□ -0.33
SEC31A-228ENST00000509142 SNRKQ9NRH2 765 aa13.02□□□□□ -0.33
SEC31A-228ENST00000509142 MED23Q9ULK4 1368 aa13.02□□□□□ -0.33
SEC31A-228ENST00000509142 IFIT1P09914 478 aaKnown RBP13.01□□□□□ -0.33
SEC31A-228ENST00000509142 KBTBD3Q8NAB2 608 aa13.01□□□□□ -0.33
SEC31A-228ENST00000509142 PAG1Q9NWQ8 432 aa13.01□□□□□ -0.33
SEC31A-228ENST00000509142 ABCC6O95255 1503 aa13.01□□□□□ -0.33
SEC31A-228ENST00000509142 CHGBP05060 677 aa13.01□□□□□ -0.33
SEC31A-228ENST00000509142 UBE2HP62256 183 aa13.01□□□□□ -0.33
SEC31A-228ENST00000509142 LRRC24Q50LG9 513 aa13.01□□□□□ -0.33
SEC31A-228ENST00000509142 FERMT3Q86UX7 667 aa13.01□□□□□ -0.33
SEC31A-228ENST00000509142 CCDC39Q9UFE4 941 aa13.01□□□□□ -0.33
SEC31A-228ENST00000509142 A0A0G2JS52 829 aa13.01□□□□□ -0.33
SEC31A-228ENST00000509142 STARD3NLO95772 234 aa13.01□□□□□ -0.33
SEC31A-228ENST00000509142 COL15A1P39059 1388 aa13.01□□□□□ -0.33
SEC31A-228ENST00000509142 GIMAP6Q6P9H5 292 aa13□□□□□ -0.33
SEC31A-228ENST00000509142 C17orf53Q8N3J3 647 aaPredicted RBP13□□□□□ -0.33
SEC31A-228ENST00000509142 NAP1L2Q9ULW6 460 aaPredicted RBP13□□□□□ -0.33
SEC31A-228ENST00000509142 FAM173BQ6P4H8 233 aa13□□□□□ -0.33
SEC31A-228ENST00000509142 ATG9AQ7Z3C6 839 aa13□□□□□ -0.33
SEC31A-228ENST00000509142 SYTL4Q96C24 671 aaPredicted RBP13□□□□□ -0.33
SEC31A-228ENST00000509142 TEX13AQ9BXU3 409 aaPredicted RBP13□□□□□ -0.33
SEC31A-228ENST00000509142 COL5A2P05997 1499 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms