RNA–Protein interactions for RNA: ENST00000508854.1

SH3D21-206, Transcript of SH3 domain containing 21, humanhuman

TSL 5

Gene SH3D21, Length 1,134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-206ENST00000508854 KIAA2012Q0VF49 1180 aa13.11□□□□□ -0.31
SH3D21-206ENST00000508854 GRAPQ13588 217 aa13.11□□□□□ -0.31
SH3D21-206ENST00000508854 PDIA6Q15084 440 aa13.11□□□□□ -0.31
SH3D21-206ENST00000508854 C3orf67Q6ZVT6 689 aa13.11□□□□□ -0.31
SH3D21-206ENST00000508854 CDC37L1Q7L3B6 337 aa13.11□□□□□ -0.31
SH3D21-206ENST00000508854 LRP10Q7Z4F1 713 aa13.11□□□□□ -0.31
SH3D21-206ENST00000508854 GRAPLQ8TC17 118 aaPredicted RBP13.11□□□□□ -0.31
SH3D21-206ENST00000508854 TRMT112Q9UI30 125 aaKnown RBP13.11□□□□□ -0.31
SH3D21-206ENST00000508854 SH3TC1Q8TE82 1336 aa13.11□□□□□ -0.31
SH3D21-206ENST00000508854 THSD7BQ9C0I4 1608 aa13.1□□□□□ -0.31
SH3D21-206ENST00000508854 TCIRG1Q13488 830 aa13.1□□□□□ -0.31
SH3D21-206ENST00000508854 COPS6Q7L5N1 327 aa13.1□□□□□ -0.31
SH3D21-206ENST00000508854 SAPCD2Q86UD0 394 aa13.1□□□□□ -0.31
SH3D21-206ENST00000508854 NLRP10Q86W26 655 aa13.1□□□□□ -0.31
SH3D21-206ENST00000508854 BRPF1P55201 1214 aaPredicted RBP13.09□□□□□ -0.31
SH3D21-206ENST00000508854 AIMP1Q12904 312 aaKnown RBP13.09□□□□□ -0.31
SH3D21-206ENST00000508854 ANKRD36CQ5JPF3 1778 aa13.09□□□□□ -0.31
SH3D21-206ENST00000508854 CCDC85CA6NKD9 419 aa13.08□□□□□ -0.32
SH3D21-206ENST00000508854 RAD17O75943 681 aa13.08□□□□□ -0.32
SH3D21-206ENST00000508854 HCLS1P14317 486 aaPredicted RBP13.08□□□□□ -0.32
SH3D21-206ENST00000508854 FMR1Q06787 632 aaKnown RBP eCLIP13.08□□□□□ -0.32
SH3D21-206ENST00000508854 RALBP1Q15311 655 aa13.08□□□□□ -0.32
SH3D21-206ENST00000508854 XAGE3Q8WTP9 111 aa13.08□□□□□ -0.32
SH3D21-206ENST00000508854 DPF2Q92785 391 aa13.08□□□□□ -0.32
SH3D21-206ENST00000508854 GLIS2Q9BZE0 524 aaPredicted RBP13.08□□□□□ -0.32
SH3D21-206ENST00000508854 CNOT7Q9UIV1 285 aaKnown RBP13.08□□□□□ -0.32
SH3D21-206ENST00000508854 AOC2O75106 756 aa13.07□□□□□ -0.32
SH3D21-206ENST00000508854 HSP90B1P14625 803 aaKnown RBP13.07□□□□□ -0.32
SH3D21-206ENST00000508854 TMPOP42166 694 aaKnown RBP13.07□□□□□ -0.32
SH3D21-206ENST00000508854 NOGQ13253 232 aa13.07□□□□□ -0.32
SH3D21-206ENST00000508854 WASHC4Q2M389 1173 aa13.07□□□□□ -0.32
SH3D21-206ENST00000508854 PROSER3Q2NL68 480 aa13.07□□□□□ -0.32
SH3D21-206ENST00000508854 ANXA1P04083 346 aa13.06□□□□□ -0.32
SH3D21-206ENST00000508854 HOXB7P09629 217 aa13.06□□□□□ -0.32
SH3D21-206ENST00000508854 RPS12P25398 132 aaKnown RBP13.06□□□□□ -0.32
SH3D21-206ENST00000508854 MLLT1Q03111 559 aaPredicted RBP13.06□□□□□ -0.32
SH3D21-206ENST00000508854 PLBD2Q8NHP8 589 aa13.06□□□□□ -0.32
SH3D21-206ENST00000508854 EYA3Q99504 573 aa13.06□□□□□ -0.32
SH3D21-206ENST00000508854 ZNF408Q9H9D4 720 aa13.06□□□□□ -0.32
SH3D21-206ENST00000508854 RGS19P49795 217 aa13.05□□□□□ -0.32
SH3D21-206ENST00000508854 HIRAP54198 1017 aaPredicted RBP13.05□□□□□ -0.32
SH3D21-206ENST00000508854 FAM161AQ3B820 660 aa13.05□□□□□ -0.32
SH3D21-206ENST00000508854 ANKRD13DQ6ZTN6 518 aa13.05□□□□□ -0.32
SH3D21-206ENST00000508854 MICALL2Q8IY33 904 aa13.05□□□□□ -0.32
SH3D21-206ENST00000508854 NECTIN2Q92692 538 aa13.05□□□□□ -0.32
SH3D21-206ENST00000508854 DBF4Q9UBU7 674 aaPredicted RBP13.05□□□□□ -0.32
SH3D21-206ENST00000508854 NSFL1CQ9UNZ2 370 aaKnown RBP13.05□□□□□ -0.32
SH3D21-206ENST00000508854 C6orf229H3BNL8 230 aa13.04□□□□□ -0.32
SH3D21-206ENST00000508854 CHL1O00533 1208 aa13.04□□□□□ -0.32
SH3D21-206ENST00000508854 SF3B3Q15393 1217 aaKnown RBP13.04□□□□□ -0.32
SH3D21-206ENST00000508854 SLC51AQ86UW1 340 aa13.04□□□□□ -0.32
SH3D21-206ENST00000508854 C2orf69Q8N8R5 385 aa13.04□□□□□ -0.32
SH3D21-206ENST00000508854 TRPM4Q8TD43 1214 aa13.04□□□□□ -0.32
SH3D21-206ENST00000508854 CCDC102AQ96A19 550 aa13.04□□□□□ -0.32
SH3D21-206ENST00000508854 DCPSQ96C86 337 aaKnown RBP13.04□□□□□ -0.32
SH3D21-206ENST00000508854 HYPKQ9NX55 129 aa13.04□□□□□ -0.32
SH3D21-206ENST00000508854 LAMB2P55268 1798 aa13.04□□□□□ -0.32
SH3D21-206ENST00000508854 YDJCA8MPS7 323 aa13.03□□□□□ -0.32
SH3D21-206ENST00000508854 G3V3G9 751 aa13.03□□□□□ -0.32
SH3D21-206ENST00000508854 HUNKP57058 714 aa13.03□□□□□ -0.32
SH3D21-206ENST00000508854 DCAF8Q5TAQ9 597 aa13.03□□□□□ -0.32
SH3D21-206ENST00000508854 HDGFL1Q5TGJ6 251 aa13.03□□□□□ -0.32
SH3D21-206ENST00000508854 USP48Q86UV5 1035 aa13.03□□□□□ -0.32
SH3D21-206ENST00000508854 LAS1LQ9Y4W2 734 aaKnown RBP13.03□□□□□ -0.32
SH3D21-206ENST00000508854 PSMD14O00487 310 aa13.02□□□□□ -0.33
SH3D21-206ENST00000508854 TRIM28Q13263 835 aaKnown RBP13.02□□□□□ -0.33
SH3D21-206ENST00000508854 KRT26Q7Z3Y9 468 aa13.02□□□□□ -0.33
SH3D21-206ENST00000508854 RUNDC1Q96C34 613 aa13.02□□□□□ -0.33
SH3D21-206ENST00000508854 FAM89AQ96GI7 184 aa13.02□□□□□ -0.33
SH3D21-206ENST00000508854 ISCA1Q9BUE6 129 aa13.02□□□□□ -0.33
SH3D21-206ENST00000508854 ZC3H12CQ9C0D7 883 aaKnown RBP13.02□□□□□ -0.33
SH3D21-206ENST00000508854 MCOLN1Q9GZU1 580 aa13.02□□□□□ -0.33
SH3D21-206ENST00000508854 CHPF2Q9P2E5 772 aa13.02□□□□□ -0.33
SH3D21-206ENST00000508854 TSKSQ9UJT2 592 aa13.02□□□□□ -0.33
SH3D21-206ENST00000508854 RIMBP2O15034 1052 aa13.01□□□□□ -0.33
SH3D21-206ENST00000508854 RPS8P62241 208 aaKnown RBP13.01□□□□□ -0.33
SH3D21-206ENST00000508854 WDR43Q15061 677 aaKnown RBP eCLIP13.01□□□□□ -0.33
SH3D21-206ENST00000508854 NEUROD2Q15784 382 aa13.01□□□□□ -0.33
SH3D21-206ENST00000508854 RGMBQ6NW40 437 aa13.01□□□□□ -0.33
SH3D21-206ENST00000508854 REM2Q8IYK8 340 aaPredicted RBP13.01□□□□□ -0.33
SH3D21-206ENST00000508854 CFAP44Q96MT7 982 aa13.01□□□□□ -0.33
SH3D21-206ENST00000508854 CHMP4AQ9BY43 222 aa13.01□□□□□ -0.33
SH3D21-206ENST00000508854 GBA2Q9HCG7 927 aaPredicted RBP13.01□□□□□ -0.33
SH3D21-206ENST00000508854 SAGE1Q9NXZ1 904 aa13.01□□□□□ -0.33
SH3D21-206ENST00000508854 ZBTB12Q9Y330 459 aaPredicted RBP13.01□□□□□ -0.33
SH3D21-206ENST00000508854 LRRC37AA6NMS7 1700 aa13.01□□□□□ -0.33
SH3D21-206ENST00000508854 IRS4O14654 1257 aaPredicted RBP13□□□□□ -0.33
SH3D21-206ENST00000508854 ECE2O60344 883 aa13□□□□□ -0.33
SH3D21-206ENST00000508854 DGKZQ13574 1117 aa13□□□□□ -0.33
SH3D21-206ENST00000508854 TBC1D10BQ4KMP7 808 aaPredicted RBP13□□□□□ -0.33
SH3D21-206ENST00000508854 SAMD7Q7Z3H4 446 aa13□□□□□ -0.33
SH3D21-206ENST00000508854 SULF1Q8IWU6 871 aa13□□□□□ -0.33
SH3D21-206ENST00000508854 CELF1Q92879 486 aaKnown RBP13□□□□□ -0.33
SH3D21-206ENST00000508854 DBNDD1Q9H9R9 158 aa13□□□□□ -0.33
SH3D21-206ENST00000508854 ATP5J2-PTCD1G3V325 749 aa12.99□□□□□ -0.33
SH3D21-206ENST00000508854 SLC34A2O95436 690 aa12.99□□□□□ -0.33
SH3D21-206ENST00000508854 GPSM2P81274 684 aa12.99□□□□□ -0.33
SH3D21-206ENST00000508854 GOLGA2Q08379 1002 aa12.99□□□□□ -0.33
SH3D21-206ENST00000508854 TBC1D16Q8TBP0 767 aa12.99□□□□□ -0.33
SH3D21-206ENST00000508854 PODXL2Q9NZ53 605 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms