RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 TDRD7Q8NHU6 1098 aaKnown RBP15.89■□□□□ 0.13
SNCAIP-209ENST00000508017 BICD2Q8TD16 824 aa15.89■□□□□ 0.13
SNCAIP-209ENST00000508017 DDX11Q96FC9 970 aa15.89■□□□□ 0.13
SNCAIP-209ENST00000508017 LMO7Q8WWI1 1683 aa15.89■□□□□ 0.13
SNCAIP-209ENST00000508017 ZNF165P49910 485 aa15.88■□□□□ 0.13
SNCAIP-209ENST00000508017 ANKRD1Q15327 319 aa15.88■□□□□ 0.13
SNCAIP-209ENST00000508017 CCDC144BQ3MJ40 725 aa15.88■□□□□ 0.13
SNCAIP-209ENST00000508017 CCDC144CPQ8IYA2 1237 aa15.88■□□□□ 0.13
SNCAIP-209ENST00000508017 IP6K1Q92551 441 aa15.88■□□□□ 0.13
SNCAIP-209ENST00000508017 TBX22Q9Y458 520 aa15.88■□□□□ 0.13
SNCAIP-209ENST00000508017 ADGRL3Q9HAR2 1447 aa15.88■□□□□ 0.13
SNCAIP-209ENST00000508017 GRM8O00222 908 aa15.88■□□□□ 0.13
SNCAIP-209ENST00000508017 RNF20Q5VTR2 975 aa15.88■□□□□ 0.13
SNCAIP-209ENST00000508017 CACTINQ8WUQ7 758 aaKnown RBP15.88■□□□□ 0.13
SNCAIP-209ENST00000508017 PXDNQ92626 1479 aa15.88■□□□□ 0.13
SNCAIP-209ENST00000508017 GIGYF1O75420 1035 aaPredicted RBP15.87■□□□□ 0.13
SNCAIP-209ENST00000508017 AIMP1Q12904 312 aaKnown RBP15.87■□□□□ 0.13
SNCAIP-209ENST00000508017 NAA30Q147X3 362 aaPredicted RBP15.87■□□□□ 0.13
SNCAIP-209ENST00000508017 COL15A1P39059 1388 aa15.87■□□□□ 0.13
SNCAIP-209ENST00000508017 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.87■□□□□ 0.13
SNCAIP-209ENST00000508017 CHGBP05060 677 aa15.87■□□□□ 0.13
SNCAIP-209ENST00000508017 RESTQ13127 1097 aa15.87■□□□□ 0.13
SNCAIP-209ENST00000508017 AKAP4Q5JQC9 854 aa15.87■□□□□ 0.13
SNCAIP-209ENST00000508017 BRF1Q92994 677 aa15.87■□□□□ 0.13
SNCAIP-209ENST00000508017 ANKARQ7Z5J8 1434 aa15.87■□□□□ 0.13
SNCAIP-209ENST00000508017 TNNT1P13805 278 aa15.86■□□□□ 0.13
SNCAIP-209ENST00000508017 BCL11BQ9C0K0 894 aaPredicted RBP15.86■□□□□ 0.13
SNCAIP-209ENST00000508017 ALDH8A1Q9H2A2 487 aaPredicted RBP15.86■□□□□ 0.13
SNCAIP-209ENST00000508017 CLIP2Q9UDT6 1046 aa15.86■□□□□ 0.13
SNCAIP-209ENST00000508017 NDUFB9Q9Y6M9 179 aa15.86■□□□□ 0.13
SNCAIP-209ENST00000508017 TAF5LO75529 589 aa15.86■□□□□ 0.13
SNCAIP-209ENST00000508017 PDIA4P13667 645 aaKnown RBP15.86■□□□□ 0.13
SNCAIP-209ENST00000508017 KCNA6P17658 529 aa15.86■□□□□ 0.13
SNCAIP-209ENST00000508017 GTF3C6Q969F1 213 aa15.86■□□□□ 0.13
SNCAIP-209ENST00000508017 CHMP4AQ9BY43 222 aa15.86■□□□□ 0.13
SNCAIP-209ENST00000508017 JCADQ9P266 1359 aa15.85■□□□□ 0.13
SNCAIP-209ENST00000508017 SMTNL1A8MU46 457 aa15.85■□□□□ 0.13
SNCAIP-209ENST00000508017 RNMTO43148 476 aaKnown RBP15.85■□□□□ 0.13
SNCAIP-209ENST00000508017 CEBPZQ03701 1054 aaKnown RBP15.85■□□□□ 0.13
SNCAIP-209ENST00000508017 ARID5BQ14865 1188 aa15.85■□□□□ 0.13
SNCAIP-209ENST00000508017 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.85■□□□□ 0.13
SNCAIP-209ENST00000508017 LINS1Q8NG48 757 aa15.85■□□□□ 0.13
SNCAIP-209ENST00000508017 NFAT5O94916 1531 aa15.85■□□□□ 0.13
SNCAIP-209ENST00000508017 C11orf57Q6ZUT1 292 aaPredicted RBP15.85■□□□□ 0.13
SNCAIP-209ENST00000508017 A0A087WWV3 80 aa15.84■□□□□ 0.13
SNCAIP-209ENST00000508017 IGSF3O75054 1194 aa15.84■□□□□ 0.13
SNCAIP-209ENST00000508017 FOSBP53539 338 aa15.84■□□□□ 0.13
SNCAIP-209ENST00000508017 CCDC129Q6ZRS4 1044 aa15.84■□□□□ 0.13
SNCAIP-209ENST00000508017 SLIT1O75093 1534 aa15.84■□□□□ 0.13
SNCAIP-209ENST00000508017 Q6ZUG5 572 aa15.84■□□□□ 0.13
SNCAIP-209ENST00000508017 LRRC2Q9BYS8 371 aa15.84■□□□□ 0.13
SNCAIP-209ENST00000508017 GTPBP4Q9BZE4 634 aaKnown RBP15.84■□□□□ 0.13
SNCAIP-209ENST00000508017 FTOQ9C0B1 505 aaKnown RBP eCLIP15.84■□□□□ 0.13
SNCAIP-209ENST00000508017 HMG20BQ9P0W2 317 aa15.84■□□□□ 0.13
SNCAIP-209ENST00000508017 UTYO14607 1347 aa15.84■□□□□ 0.13
SNCAIP-209ENST00000508017 IGKV5-2P06315 115 aa15.83■□□□□ 0.12
SNCAIP-209ENST00000508017 IQCB1Q15051 598 aa15.83■□□□□ 0.12
SNCAIP-209ENST00000508017 TPD52L1Q16890 204 aaPredicted RBP15.83■□□□□ 0.12
SNCAIP-209ENST00000508017 TSGA10IPQ3SY00 556 aa15.83■□□□□ 0.12
SNCAIP-209ENST00000508017 EPHA10Q5JZY3 1008 aa15.83■□□□□ 0.12
SNCAIP-209ENST00000508017 USP27XA6NNY8 438 aa15.83■□□□□ 0.12
SNCAIP-209ENST00000508017 HSP90B1P14625 803 aaKnown RBP15.83■□□□□ 0.12
SNCAIP-209ENST00000508017 PLEKHO1Q53GL0 409 aaPredicted RBP15.83■□□□□ 0.12
SNCAIP-209ENST00000508017 SEC62Q99442 399 aaKnown RBP15.83■□□□□ 0.12
SNCAIP-209ENST00000508017 ARHGAP23Q9P227 1491 aa15.83■□□□□ 0.12
SNCAIP-209ENST00000508017 H3BQV1 296 aa15.82■□□□□ 0.12
SNCAIP-209ENST00000508017 IFFO2Q5TF58 517 aa15.82■□□□□ 0.12
SNCAIP-209ENST00000508017 USPL1Q5W0Q7 1092 aa15.82■□□□□ 0.12
SNCAIP-209ENST00000508017 NEK1Q96PY6 1258 aa15.82■□□□□ 0.12
SNCAIP-209ENST00000508017 HEG1Q9ULI3 1381 aa15.82■□□□□ 0.12
SNCAIP-209ENST00000508017 HDAC5Q9UQL6 1122 aa15.82■□□□□ 0.12
SNCAIP-209ENST00000508017 MYH15Q9Y2K3 1946 aa15.82■□□□□ 0.12
SNCAIP-209ENST00000508017 ZNF592Q92610 1267 aa15.82■□□□□ 0.12
SNCAIP-209ENST00000508017 SCRN1Q12765 414 aa15.81■□□□□ 0.12
SNCAIP-209ENST00000508017 C1orf141Q5JVX7 400 aa15.81■□□□□ 0.12
SNCAIP-209ENST00000508017 GOLPH3LQ9H4A5 285 aa15.81■□□□□ 0.12
SNCAIP-209ENST00000508017 PHF8Q9UPP1 1060 aa15.81■□□□□ 0.12
SNCAIP-209ENST00000508017 ZNF609O15014 1411 aa15.81■□□□□ 0.12
SNCAIP-209ENST00000508017 ADD1P35611 737 aaKnown RBP15.8■□□□□ 0.12
SNCAIP-209ENST00000508017 PDIA6Q15084 440 aa15.8■□□□□ 0.12
SNCAIP-209ENST00000508017 LRRC8AQ8IWT6 810 aa15.8■□□□□ 0.12
SNCAIP-209ENST00000508017 CCDC112Q8NEF3 446 aa15.8■□□□□ 0.12
SNCAIP-209ENST00000508017 RBM33Q96EV2 1170 aaKnown RBP15.8■□□□□ 0.12
SNCAIP-209ENST00000508017 CTNNA3Q9UI47 895 aa15.8■□□□□ 0.12
SNCAIP-209ENST00000508017 DBNLQ9UJU6 430 aaKnown RBP15.8■□□□□ 0.12
SNCAIP-209ENST00000508017 GOLGA6L19H0YKK7 550 aa15.8■□□□□ 0.12
SNCAIP-209ENST00000508017 CYP21A2P08686 494 aa15.8■□□□□ 0.12
SNCAIP-209ENST00000508017 CDC25BP30305 580 aa15.8■□□□□ 0.12
SNCAIP-209ENST00000508017 MRC1P22897 1456 aa15.8■□□□□ 0.12
SNCAIP-209ENST00000508017 LAMA4Q16363 1823 aa15.79■□□□□ 0.12
SNCAIP-209ENST00000508017 PPFIA3O75145 1194 aa15.79■□□□□ 0.12
SNCAIP-209ENST00000508017 KRT32Q14532 448 aa15.79■□□□□ 0.12
SNCAIP-209ENST00000508017 CEP135Q66GS9 1140 aa15.79■□□□□ 0.12
SNCAIP-209ENST00000508017 RIC3Q7Z5B4 369 aa15.79■□□□□ 0.12
SNCAIP-209ENST00000508017 DDX21Q9NR30 783 aaKnown RBP eCLIP15.79■□□□□ 0.12
SNCAIP-209ENST00000508017 DDX58O95786 925 aaKnown RBP15.79■□□□□ 0.12
SNCAIP-209ENST00000508017 SYCP1Q15431 976 aa15.79■□□□□ 0.12
SNCAIP-209ENST00000508017 STOX1Q6ZVD7 989 aa15.79■□□□□ 0.12
SNCAIP-209ENST00000508017 CCAR1Q8IX12 1150 aaKnown RBP15.79■□□□□ 0.12
SNCAIP-209ENST00000508017 PAXBP1Q9Y5B6 917 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms