RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 NEUROD2Q15784 382 aa17.57■□□□□ 0.4
POLR2J3-212ENST00000507355 CIAPIN1Q6FI81 312 aa17.57■□□□□ 0.4
POLR2J3-212ENST00000507355 PPP1R42Q7Z4L9 355 aa17.57■□□□□ 0.4
POLR2J3-212ENST00000507355 ZNRF3Q9ULT6 936 aa17.57■□□□□ 0.4
POLR2J3-212ENST00000507355 LMOD3Q0VAK6 560 aa17.56■□□□□ 0.4
POLR2J3-212ENST00000507355 DGKZQ13574 1117 aa17.56■□□□□ 0.4
POLR2J3-212ENST00000507355 PROSER3Q2NL68 480 aa17.56■□□□□ 0.4
POLR2J3-212ENST00000507355 PARP10Q53GL7 1025 aa17.56■□□□□ 0.4
POLR2J3-212ENST00000507355 NECTIN2Q92692 538 aa17.56■□□□□ 0.4
POLR2J3-212ENST00000507355 PDE4DIPQ5VU43 2346 aa17.56■□□□□ 0.4
POLR2J3-212ENST00000507355 RAD17O75943 681 aa17.55■□□□□ 0.4
POLR2J3-212ENST00000507355 CCDC146Q8IYE0 955 aa17.55■□□□□ 0.4
POLR2J3-212ENST00000507355 NLRP3Q96P20 1036 aa17.55■□□□□ 0.4
POLR2J3-212ENST00000507355 BCL2L13Q9BXK5 485 aa17.55■□□□□ 0.4
POLR2J3-212ENST00000507355 ATP6V0A2Q9Y487 856 aa17.55■□□□□ 0.4
POLR2J3-212ENST00000507355 ABCC4O15439 1325 aa17.54■□□□□ 0.4
POLR2J3-212ENST00000507355 AIMP1Q12904 312 aaKnown RBP17.54■□□□□ 0.4
POLR2J3-212ENST00000507355 SLC10A5Q5PT55 438 aa17.54■□□□□ 0.4
POLR2J3-212ENST00000507355 DPP8Q6V1X1 898 aaPredicted RBP17.54■□□□□ 0.4
POLR2J3-212ENST00000507355 COPS6Q7L5N1 327 aa17.54■□□□□ 0.4
POLR2J3-212ENST00000507355 SUPT20HQ8NEM7 779 aa17.54■□□□□ 0.4
POLR2J3-212ENST00000507355 HHIPL1Q96JK4 782 aa17.54■□□□□ 0.4
POLR2J3-212ENST00000507355 UTP14AQ9BVJ6 771 aaKnown RBP17.54■□□□□ 0.4
POLR2J3-212ENST00000507355 MYBBP1AQ9BQG0 1328 aaKnown RBP17.53■□□□□ 0.4
POLR2J3-212ENST00000507355 SHTN1A0MZ66 631 aa17.53■□□□□ 0.4
POLR2J3-212ENST00000507355 TRPM4Q8TD43 1214 aa17.53■□□□□ 0.4
POLR2J3-212ENST00000507355 CHL1O00533 1208 aa17.52■□□□□ 0.4
POLR2J3-212ENST00000507355 HIRAP54198 1017 aaPredicted RBP17.52■□□□□ 0.4
POLR2J3-212ENST00000507355 KRT24Q2M2I5 525 aa17.52■□□□□ 0.4
POLR2J3-212ENST00000507355 XAGE3Q8WTP9 111 aa17.52■□□□□ 0.4
POLR2J3-212ENST00000507355 RUNDC1Q96C34 613 aa17.52■□□□□ 0.4
POLR2J3-212ENST00000507355 ZIC5Q96T25 663 aa17.52■□□□□ 0.4
POLR2J3-212ENST00000507355 VPS33BQ9H267 617 aa17.52■□□□□ 0.4
POLR2J3-212ENST00000507355 LAS1LQ9Y4W2 734 aaKnown RBP17.52■□□□□ 0.4
POLR2J3-212ENST00000507355 LAMB2P55268 1798 aa17.52■□□□□ 0.4
POLR2J3-212ENST00000507355 HUNKP57058 714 aa17.51■□□□□ 0.39
POLR2J3-212ENST00000507355 TNIP1Q15025 636 aa17.51■□□□□ 0.39
POLR2J3-212ENST00000507355 DLK2Q6UY11 383 aa17.51■□□□□ 0.39
POLR2J3-212ENST00000507355 CDC37L1Q7L3B6 337 aa17.51■□□□□ 0.39
POLR2J3-212ENST00000507355 PGAP2Q9UHJ9 254 aa17.51■□□□□ 0.39
POLR2J3-212ENST00000507355 TRIM35Q9UPQ4 493 aa17.51■□□□□ 0.39
POLR2J3-212ENST00000507355 CDHR2Q9BYE9 1310 aa17.5■□□□□ 0.39
POLR2J3-212ENST00000507355 NOGQ13253 232 aa17.5■□□□□ 0.39
POLR2J3-212ENST00000507355 WDR43Q15061 677 aaKnown RBP eCLIP17.5■□□□□ 0.39
POLR2J3-212ENST00000507355 HSP90AB3PQ58FF7 597 aa17.5■□□□□ 0.39
POLR2J3-212ENST00000507355 USP48Q86UV5 1035 aa17.5■□□□□ 0.39
POLR2J3-212ENST00000507355 NLRP10Q86W26 655 aa17.5■□□□□ 0.39
POLR2J3-212ENST00000507355 MPNDQ8N594 471 aa17.5■□□□□ 0.39
POLR2J3-212ENST00000507355 ZC3H15Q8WU90 426 aaKnown RBP17.5■□□□□ 0.39
POLR2J3-212ENST00000507355 RTFDC1Q9BY42 306 aaPredicted RBP17.5■□□□□ 0.39
POLR2J3-212ENST00000507355 PCDH10Q9P2E7 1040 aa17.5■□□□□ 0.39
POLR2J3-212ENST00000507355 CNOT7Q9UIV1 285 aaKnown RBP17.5■□□□□ 0.39
POLR2J3-212ENST00000507355 ADAMTS8Q9UP79 889 aa17.5■□□□□ 0.39
POLR2J3-212ENST00000507355 HCLS1P14317 486 aaPredicted RBP17.49■□□□□ 0.39
POLR2J3-212ENST00000507355 KIAA2012Q0VF49 1180 aa17.49■□□□□ 0.39
POLR2J3-212ENST00000507355 TCIRG1Q13488 830 aa17.49■□□□□ 0.39
POLR2J3-212ENST00000507355 MICALL2Q8IY33 904 aa17.49■□□□□ 0.39
POLR2J3-212ENST00000507355 TAF1P21675 1872 aa17.49■□□□□ 0.39
POLR2J3-212ENST00000507355 SOX10P56693 466 aa17.48■□□□□ 0.39
POLR2J3-212ENST00000507355 TRMT112Q9UI30 125 aaKnown RBP17.48■□□□□ 0.39
POLR2J3-212ENST00000507355 ANKRD36CQ5JPF3 1778 aa17.48■□□□□ 0.39
POLR2J3-212ENST00000507355 YDJCA8MPS7 323 aa17.47■□□□□ 0.39
POLR2J3-212ENST00000507355 H7C1D1 291 aa17.47■□□□□ 0.39
POLR2J3-212ENST00000507355 BBOX1O75936 387 aa17.47■□□□□ 0.39
POLR2J3-212ENST00000507355 SP8Q8IXZ3 490 aa17.47■□□□□ 0.39
POLR2J3-212ENST00000507355 ZNF428Q96B54 188 aa17.47■□□□□ 0.39
POLR2J3-212ENST00000507355 CHPF2Q9P2E5 772 aa17.47■□□□□ 0.39
POLR2J3-212ENST00000507355 ZBTB12Q9Y330 459 aaPredicted RBP17.47■□□□□ 0.39
POLR2J3-212ENST00000507355 DUOX1Q9NRD9 1551 aa17.46■□□□□ 0.39
POLR2J3-212ENST00000507355 DDX46Q7L014 1031 aaKnown RBP17.46■□□□□ 0.39
POLR2J3-212ENST00000507355 SAMD7Q7Z3H4 446 aa17.46■□□□□ 0.39
POLR2J3-212ENST00000507355 TBC1D10BQ4KMP7 808 aaPredicted RBP17.45■□□□□ 0.38
POLR2J3-212ENST00000507355 HDGFL1Q5TGJ6 251 aa17.45■□□□□ 0.38
POLR2J3-212ENST00000507355 RGMBQ6NW40 437 aa17.45■□□□□ 0.38
POLR2J3-212ENST00000507355 KRT26Q7Z3Y9 468 aa17.45■□□□□ 0.38
POLR2J3-212ENST00000507355 POLR2AP24928 1970 aaKnown RBP17.44■□□□□ 0.38
POLR2J3-212ENST00000507355 ADM5C9JUS6 153 aa17.44■□□□□ 0.38
POLR2J3-212ENST00000507355 GRAPQ13588 217 aa17.44■□□□□ 0.38
POLR2J3-212ENST00000507355 ANKRD13DQ6ZTN6 518 aa17.44■□□□□ 0.38
POLR2J3-212ENST00000507355 PLBD2Q8NHP8 589 aa17.44■□□□□ 0.38
POLR2J3-212ENST00000507355 GRAPLQ8TC17 118 aaPredicted RBP17.44■□□□□ 0.38
POLR2J3-212ENST00000507355 SH3TC1Q8TE82 1336 aa17.44■□□□□ 0.38
POLR2J3-212ENST00000507355 FAM155AB1AL88 458 aaPredicted RBP17.43■□□□□ 0.38
POLR2J3-212ENST00000507355 EGFRP00533 1210 aa17.43■□□□□ 0.38
POLR2J3-212ENST00000507355 HOXB7P09629 217 aa17.43■□□□□ 0.38
POLR2J3-212ENST00000507355 RBM26Q5T8P6 1007 aaKnown RBP17.43■□□□□ 0.38
POLR2J3-212ENST00000507355 DBNDD1Q9H9R9 158 aa17.43■□□□□ 0.38
POLR2J3-212ENST00000507355 GBA2Q9HCG7 927 aaPredicted RBP17.43■□□□□ 0.38
POLR2J3-212ENST00000507355 DBF4Q9UBU7 674 aaPredicted RBP17.43■□□□□ 0.38
POLR2J3-212ENST00000507355 LRRC37AA6NMS7 1700 aa17.43■□□□□ 0.38
POLR2J3-212ENST00000507355 PSMD14O00487 310 aa17.42■□□□□ 0.38
POLR2J3-212ENST00000507355 TRPA1O75762 1119 aa17.42■□□□□ 0.38
POLR2J3-212ENST00000507355 ZNF157P51786 506 aaPredicted RBP17.42■□□□□ 0.38
POLR2J3-212ENST00000507355 KIF23Q02241 960 aaPredicted RBP17.42■□□□□ 0.38
POLR2J3-212ENST00000507355 DUSP27Q5VZP5 1158 aa17.42■□□□□ 0.38
POLR2J3-212ENST00000507355 C2orf69Q8N8R5 385 aa17.42■□□□□ 0.38
POLR2J3-212ENST00000507355 PRKRIP1Q9H875 184 aaPredicted RBP17.42■□□□□ 0.38
POLR2J3-212ENST00000507355 SAGE1Q9NXZ1 904 aa17.42■□□□□ 0.38
POLR2J3-212ENST00000507355 AKAP11Q9UKA4 1901 aa17.42■□□□□ 0.38
POLR2J3-212ENST00000507355 ATP5J2-PTCD1G3V325 749 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms