RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 UTP14AQ9BVJ6 771 aaKnown RBP21.75■■□□□ 1.07
SNF8-205ENST00000507302 GLIS2Q9BZE0 524 aaPredicted RBP21.75■■□□□ 1.07
SNF8-205ENST00000507302 CCDC85CA6NKD9 419 aa21.74■■□□□ 1.07
SNF8-205ENST00000507302 CIAPIN1Q6FI81 312 aa21.74■■□□□ 1.07
SNF8-205ENST00000507302 TAF1P21675 1872 aa21.74■■□□□ 1.07
SNF8-205ENST00000507302 GRM1Q13255 1194 aa21.73■■□□□ 1.07
SNF8-205ENST00000507302 MCOLN1Q9GZU1 580 aa21.73■■□□□ 1.07
SNF8-205ENST00000507302 TMX4Q9H1E5 349 aaPredicted RBP21.73■■□□□ 1.07
SNF8-205ENST00000507302 TSKSQ9UJT2 592 aa21.73■■□□□ 1.07
SNF8-205ENST00000507302 TNIP1Q15025 636 aa21.72■■□□□ 1.07
SNF8-205ENST00000507302 DPP8Q6V1X1 898 aaPredicted RBP21.72■■□□□ 1.07
SNF8-205ENST00000507302 CDC37L1Q7L3B6 337 aa21.72■■□□□ 1.07
SNF8-205ENST00000507302 MPNDQ8N594 471 aa21.72■■□□□ 1.07
SNF8-205ENST00000507302 BABAM1Q9NWV8 329 aa21.72■■□□□ 1.07
SNF8-205ENST00000507302 DDX60Q8IY21 1712 aaKnown RBP21.72■■□□□ 1.07
SNF8-205ENST00000507302 YDJCA8MPS7 323 aa21.71■■□□□ 1.07
SNF8-205ENST00000507302 NEFMP07197 916 aa21.71■■□□□ 1.07
SNF8-205ENST00000507302 PROSER3Q2NL68 480 aa21.71■■□□□ 1.07
SNF8-205ENST00000507302 NLRP10Q86W26 655 aa21.71■■□□□ 1.07
SNF8-205ENST00000507302 TRPM4Q8TD43 1214 aa21.71■■□□□ 1.07
SNF8-205ENST00000507302 POLR2AP24928 1970 aaKnown RBP21.69■■□□□ 1.06
SNF8-205ENST00000507302 NOGQ13253 232 aa21.69■■□□□ 1.06
SNF8-205ENST00000507302 GRAPQ13588 217 aa21.69■■□□□ 1.06
SNF8-205ENST00000507302 TMC4Q7Z404 712 aa21.69■■□□□ 1.06
SNF8-205ENST00000507302 GRAPLQ8TC17 118 aaPredicted RBP21.69■■□□□ 1.06
SNF8-205ENST00000507302 DPF2Q92785 391 aa21.69■■□□□ 1.06
SNF8-205ENST00000507302 CNOT7Q9UIV1 285 aaKnown RBP21.69■■□□□ 1.06
SNF8-205ENST00000507302 RAD17O75943 681 aa21.68■■□□□ 1.06
SNF8-205ENST00000507302 HSP90AB3PQ58FF7 597 aa21.68■■□□□ 1.06
SNF8-205ENST00000507302 ZIC5Q96T25 663 aa21.68■■□□□ 1.06
SNF8-205ENST00000507302 SHTN1A0MZ66 631 aa21.67■■□□□ 1.06
SNF8-205ENST00000507302 HCLS1P14317 486 aaPredicted RBP21.67■■□□□ 1.06
SNF8-205ENST00000507302 BCL2L13Q9BXK5 485 aa21.67■■□□□ 1.06
SNF8-205ENST00000507302 TSPYL4Q9UJ04 414 aa21.67■■□□□ 1.06
SNF8-205ENST00000507302 FAM155AB1AL88 458 aaPredicted RBP21.66■■□□□ 1.06
SNF8-205ENST00000507302 TCIRG1Q13488 830 aa21.66■■□□□ 1.06
SNF8-205ENST00000507302 DDX46Q7L014 1031 aaKnown RBP21.66■■□□□ 1.06
SNF8-205ENST00000507302 PNNQ9H307 717 aaKnown RBP21.66■■□□□ 1.06
SNF8-205ENST00000507302 SH3TC1Q8TE82 1336 aa21.65■■□□□ 1.06
SNF8-205ENST00000507302 ANXA1P04083 346 aa21.65■■□□□ 1.06
SNF8-205ENST00000507302 COPS6Q7L5N1 327 aa21.65■■□□□ 1.06
SNF8-205ENST00000507302 PCDH10Q9P2E7 1040 aa21.65■■□□□ 1.06
SNF8-205ENST00000507302 COL4A1P02462 1669 aa21.64■■□□□ 1.05
SNF8-205ENST00000507302 H7C1D1 291 aa21.64■■□□□ 1.05
SNF8-205ENST00000507302 MICALL2Q8IY33 904 aa21.64■■□□□ 1.05
SNF8-205ENST00000507302 SAGE1Q9NXZ1 904 aa21.64■■□□□ 1.05
SNF8-205ENST00000507302 PDE4DIPQ5VU43 2346 aa21.64■■□□□ 1.05
SNF8-205ENST00000507302 EIF2S2P20042 333 aaKnown RBP21.63■■□□□ 1.05
SNF8-205ENST00000507302 HUNKP57058 714 aa21.63■■□□□ 1.05
SNF8-205ENST00000507302 DGKZQ13574 1117 aa21.63■■□□□ 1.05
SNF8-205ENST00000507302 USP48Q86UV5 1035 aa21.63■■□□□ 1.05
SNF8-205ENST00000507302 TRMT112Q9UI30 125 aaKnown RBP21.63■■□□□ 1.05
SNF8-205ENST00000507302 MAPK8IP3Q9UPT6 1336 aa21.62■■□□□ 1.05
SNF8-205ENST00000507302 SF3B3Q15393 1217 aaKnown RBP21.62■■□□□ 1.05
SNF8-205ENST00000507302 XAGE3Q8WTP9 111 aa21.62■■□□□ 1.05
SNF8-205ENST00000507302 ZNF408Q9H9D4 720 aa21.62■■□□□ 1.05
SNF8-205ENST00000507302 SCN9AQ15858 1988 aa21.61■■□□□ 1.05
SNF8-205ENST00000507302 AKAP11Q9UKA4 1901 aa21.61■■□□□ 1.05
SNF8-205ENST00000507302 PSMD14O00487 310 aa21.61■■□□□ 1.05
SNF8-205ENST00000507302 EGFRP00533 1210 aa21.61■■□□□ 1.05
SNF8-205ENST00000507302 RPS12P25398 132 aaKnown RBP21.61■■□□□ 1.05
SNF8-205ENST00000507302 RGMBQ6NW40 437 aa21.61■■□□□ 1.05
SNF8-205ENST00000507302 DLK2Q6UY11 383 aa21.61■■□□□ 1.05
SNF8-205ENST00000507302 ZBTB12Q9Y330 459 aaPredicted RBP21.61■■□□□ 1.05
SNF8-205ENST00000507302 ZNF609O15014 1411 aa21.61■■□□□ 1.05
SNF8-205ENST00000507302 WASHC4Q2M389 1173 aa21.6■■□□□ 1.05
SNF8-205ENST00000507302 SAMD7Q7Z3H4 446 aa21.6■■□□□ 1.05
SNF8-205ENST00000507302 RTL9Q8NET4 1388 aa21.6■■□□□ 1.05
SNF8-205ENST00000507302 PSME4Q14997 1843 aa21.59■■□□□ 1.05
SNF8-205ENST00000507302 ISCA1Q9BUE6 129 aa21.59■■□□□ 1.05
SNF8-205ENST00000507302 GBA2Q9HCG7 927 aaPredicted RBP21.59■■□□□ 1.05
SNF8-205ENST00000507302 RIPK4P57078 832 aa21.58■■□□□ 1.05
SNF8-205ENST00000507302 KRT26Q7Z3Y9 468 aa21.58■■□□□ 1.05
SNF8-205ENST00000507302 CELF1Q92879 486 aaKnown RBP21.58■■□□□ 1.05
SNF8-205ENST00000507302 CCDC102AQ96A19 550 aa21.58■■□□□ 1.05
SNF8-205ENST00000507302 POLLQ9UGP5 575 aa21.58■■□□□ 1.05
SNF8-205ENST00000507302 AIMP1Q12904 312 aaKnown RBP21.57■■□□□ 1.04
SNF8-205ENST00000507302 CHL1O00533 1208 aa21.56■■□□□ 1.04
SNF8-205ENST00000507302 TMPOP42166 694 aaKnown RBP21.56■■□□□ 1.04
SNF8-205ENST00000507302 TBC1D10BQ4KMP7 808 aaPredicted RBP21.56■■□□□ 1.04
SNF8-205ENST00000507302 PLBD2Q8NHP8 589 aa21.56■■□□□ 1.04
SNF8-205ENST00000507302 DBNDD1Q9H9R9 158 aa21.56■■□□□ 1.04
SNF8-205ENST00000507302 KCNQ5Q9NR82 932 aa21.56■■□□□ 1.04
SNF8-205ENST00000507302 VIL1P09327 827 aaKnown RBP21.55■■□□□ 1.04
SNF8-205ENST00000507302 KIF23Q02241 960 aaPredicted RBP21.55■■□□□ 1.04
SNF8-205ENST00000507302 TRIM28Q13263 835 aaKnown RBP21.55■■□□□ 1.04
SNF8-205ENST00000507302 C2orf69Q8N8R5 385 aa21.55■■□□□ 1.04
SNF8-205ENST00000507302 NSFL1CQ9UNZ2 370 aaKnown RBP21.55■■□□□ 1.04
SNF8-205ENST00000507302 ADM5C9JUS6 153 aa21.54■■□□□ 1.04
SNF8-205ENST00000507302 ECE2O60344 883 aa21.54■■□□□ 1.04
SNF8-205ENST00000507302 SLC10A3P09131 477 aa21.54■■□□□ 1.04
SNF8-205ENST00000507302 GPSM2P81274 684 aa21.54■■□□□ 1.04
SNF8-205ENST00000507302 LMOD3Q0VAK6 560 aa21.54■■□□□ 1.04
SNF8-205ENST00000507302 RNF186Q9NXI6 227 aa21.54■■□□□ 1.04
SNF8-205ENST00000507302 PODXL2Q9NZ53 605 aa21.54■■□□□ 1.04
SNF8-205ENST00000507302 HOXB7P09629 217 aa21.53■■□□□ 1.04
SNF8-205ENST00000507302 KRT24Q2M2I5 525 aa21.53■■□□□ 1.04
SNF8-205ENST00000507302 TBC1D16Q8TBP0 767 aa21.53■■□□□ 1.04
SNF8-205ENST00000507302 DCPSQ96C86 337 aaKnown RBP21.53■■□□□ 1.04
SNF8-205ENST00000507302 CHPF2Q9P2E5 772 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms