RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 SH3TC1Q8TE82 1336 aa11.15□□□□□ -0.62
SCAMP1-202ENST00000506858 A0A0G2JLW4 131 aa11.15□□□□□ -0.62
SCAMP1-202ENST00000506858 GRM8O00222 908 aa11.15□□□□□ -0.62
SCAMP1-202ENST00000506858 ALDH1L1O75891 902 aa11.15□□□□□ -0.62
SCAMP1-202ENST00000506858 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.15□□□□□ -0.62
SCAMP1-202ENST00000506858 ZBTB38Q8NAP3 1195 aaPredicted RBP11.15□□□□□ -0.62
SCAMP1-202ENST00000506858 SUCLG2Q96I99 432 aa11.15□□□□□ -0.62
SCAMP1-202ENST00000506858 CRBNQ96SW2 442 aa11.15□□□□□ -0.62
SCAMP1-202ENST00000506858 RGL2O15211 777 aa11.14□□□□□ -0.63
SCAMP1-202ENST00000506858 PCCAP05165 728 aaPredicted RBP11.14□□□□□ -0.63
SCAMP1-202ENST00000506858 CENPBP07199 599 aaPredicted RBP11.14□□□□□ -0.63
SCAMP1-202ENST00000506858 KAZALD1Q96I82 304 aa11.14□□□□□ -0.63
SCAMP1-202ENST00000506858 FHDC1Q9C0D6 1143 aaPredicted RBP11.14□□□□□ -0.63
SCAMP1-202ENST00000506858 NYXQ9GZU5 481 aa11.14□□□□□ -0.63
SCAMP1-202ENST00000506858 AFDNP55196 1824 aaKnown RBP11.14□□□□□ -0.63
SCAMP1-202ENST00000506858 RNF123Q5XPI4 1314 aa11.14□□□□□ -0.63
SCAMP1-202ENST00000506858 DPEP1P16444 411 aa11.13□□□□□ -0.63
SCAMP1-202ENST00000506858 ST5P78524 1137 aa11.13□□□□□ -0.63
SCAMP1-202ENST00000506858 PLCD3Q8N3E9 789 aa11.13□□□□□ -0.63
SCAMP1-202ENST00000506858 ZBTB7BO15156 539 aaPredicted RBP11.13□□□□□ -0.63
SCAMP1-202ENST00000506858 MVPQ14764 893 aaKnown RBP11.13□□□□□ -0.63
SCAMP1-202ENST00000506858 SLC10A5Q5PT55 438 aa11.13□□□□□ -0.63
SCAMP1-202ENST00000506858 C2CD5Q86YS7 1000 aa11.13□□□□□ -0.63
SCAMP1-202ENST00000506858 LRRFIP2Q9Y608 721 aaKnown RBP11.13□□□□□ -0.63
SCAMP1-202ENST00000506858 ANKRD36CQ5JPF3 1778 aa11.13□□□□□ -0.63
SCAMP1-202ENST00000506858 UTRNP46939 3433 aa11.12□□□□□ -0.63
SCAMP1-202ENST00000506858 FOXO4P98177 505 aa11.12□□□□□ -0.63
SCAMP1-202ENST00000506858 PDE3AQ14432 1141 aa11.12□□□□□ -0.63
SCAMP1-202ENST00000506858 EXOC6Q8TAG9 804 aa11.12□□□□□ -0.63
SCAMP1-202ENST00000506858 ZNF622Q969S3 477 aaKnown RBP eCLIP11.12□□□□□ -0.63
SCAMP1-202ENST00000506858 BRIP1Q9BX63 1249 aa11.12□□□□□ -0.63
SCAMP1-202ENST00000506858 SEC31BQ9NQW1 1179 aa11.12□□□□□ -0.63
SCAMP1-202ENST00000506858 COL24A1Q17RW2 1714 aa11.11□□□□□ -0.63
SCAMP1-202ENST00000506858 UBTFL1P0CB47 393 aaPredicted RBP11.11□□□□□ -0.63
SCAMP1-202ENST00000506858 LMBR1LQ6UX01 489 aa11.11□□□□□ -0.63
SCAMP1-202ENST00000506858 NLRP3Q96P20 1036 aa11.11□□□□□ -0.63
SCAMP1-202ENST00000506858 SYT17Q9BSW7 474 aa11.11□□□□□ -0.63
SCAMP1-202ENST00000506858 BICC1Q9H694 974 aaKnown RBP11.11□□□□□ -0.63
SCAMP1-202ENST00000506858 CHMP3Q9Y3E7 222 aa11.11□□□□□ -0.63
SCAMP1-202ENST00000506858 PXDNLA1KZ92 1463 aa11.1□□□□□ -0.63
SCAMP1-202ENST00000506858 PDE8AO60658 829 aa11.1□□□□□ -0.63
SCAMP1-202ENST00000506858 KCNA3P22001 575 aa11.1□□□□□ -0.63
SCAMP1-202ENST00000506858 OLFM4Q6UX06 510 aa11.1□□□□□ -0.63
SCAMP1-202ENST00000506858 ANKRD44Q8N8A2 993 aa11.1□□□□□ -0.63
SCAMP1-202ENST00000506858 TTLL11Q8NHH1 800 aa11.1□□□□□ -0.63
SCAMP1-202ENST00000506858 GREM2Q9H772 168 aa11.1□□□□□ -0.63
SCAMP1-202ENST00000506858 C10orf71Q711Q0 1435 aa11.1□□□□□ -0.63
SCAMP1-202ENST00000506858 UTYO14607 1347 aa11.1□□□□□ -0.63
SCAMP1-202ENST00000506858 TNRC6CQ9HCJ0 1690 aaKnown RBP11.1□□□□□ -0.63
SCAMP1-202ENST00000506858 MS4A1P11836 297 aa11.09□□□□□ -0.63
SCAMP1-202ENST00000506858 CTSWP56202 376 aa11.09□□□□□ -0.63
SCAMP1-202ENST00000506858 FAM161AQ3B820 660 aa11.09□□□□□ -0.63
SCAMP1-202ENST00000506858 KLHDC4Q8TBB5 520 aa11.09□□□□□ -0.63
SCAMP1-202ENST00000506858 ZNF594Q96JF6 807 aaPredicted RBP11.09□□□□□ -0.63
SCAMP1-202ENST00000506858 ANKRD31Q8N7Z5 1873 aa11.09□□□□□ -0.63
SCAMP1-202ENST00000506858 CDHR2Q9BYE9 1310 aa11.09□□□□□ -0.63
SCAMP1-202ENST00000506858 NRXN2Q9P2S2 1712 aa11.09□□□□□ -0.63
SCAMP1-202ENST00000506858 IBTKQ9P2D0 1353 aaPredicted RBP11.09□□□□□ -0.63
SCAMP1-202ENST00000506858 H0YIN7 160 aa11.09□□□□□ -0.63
SCAMP1-202ENST00000506858 SRGNP10124 158 aa11.09□□□□□ -0.63
SCAMP1-202ENST00000506858 PDE6BP35913 854 aa11.09□□□□□ -0.63
SCAMP1-202ENST00000506858 ZBTB40Q9NUA8 1239 aa11.09□□□□□ -0.63
SCAMP1-202ENST00000506858 CD2APQ9Y5K6 639 aa11.09□□□□□ -0.63
SCAMP1-202ENST00000506858 COL4A1P02462 1669 aa11.08□□□□□ -0.63
SCAMP1-202ENST00000506858 GNAI2P04899 355 aa11.08□□□□□ -0.64
SCAMP1-202ENST00000506858 GNAI3P08754 354 aa11.08□□□□□ -0.64
SCAMP1-202ENST00000506858 POTEGQ6S5H5 508 aa11.08□□□□□ -0.64
SCAMP1-202ENST00000506858 PELP1Q8IZL8 1130 aaKnown RBP11.08□□□□□ -0.64
SCAMP1-202ENST00000506858 CELF1Q92879 486 aaKnown RBP11.08□□□□□ -0.64
SCAMP1-202ENST00000506858 DDX19BQ9UMR2 479 aa11.08□□□□□ -0.64
SCAMP1-202ENST00000506858 TAF1P21675 1872 aa11.08□□□□□ -0.64
SCAMP1-202ENST00000506858 PNMA6EA0A0J9YXQ4 647 aa11.07□□□□□ -0.64
SCAMP1-202ENST00000506858 KLRG2A4D1S0 409 aaPredicted RBP11.07□□□□□ -0.64
SCAMP1-202ENST00000506858 CSF1RP07333 972 aa11.07□□□□□ -0.64
SCAMP1-202ENST00000506858 SF3B3Q15393 1217 aaKnown RBP11.07□□□□□ -0.64
SCAMP1-202ENST00000506858 DDX60Q8IY21 1712 aaKnown RBP11.07□□□□□ -0.64
SCAMP1-202ENST00000506858 RPGRQ92834 1020 aaKnown RBP11.07□□□□□ -0.64
SCAMP1-202ENST00000506858 PLA2G12BQ9BX93 195 aa11.07□□□□□ -0.64
SCAMP1-202ENST00000506858 PA2G4Q9UQ80 394 aaKnown RBP11.07□□□□□ -0.64
SCAMP1-202ENST00000506858 N4BP2Q86UW6 1770 aaPredicted RBP11.06□□□□□ -0.64
SCAMP1-202ENST00000506858 ITGA6P23229 1130 aa11.06□□□□□ -0.64
SCAMP1-202ENST00000506858 CRY2Q49AN0 593 aa11.06□□□□□ -0.64
SCAMP1-202ENST00000506858 PCDHB15Q9Y5E8 787 aa11.06□□□□□ -0.64
SCAMP1-202ENST00000506858 WTIPA6NIX2 430 aaPredicted RBP11.06□□□□□ -0.64
SCAMP1-202ENST00000506858 NPR1P16066 1061 aa11.06□□□□□ -0.64
SCAMP1-202ENST00000506858 TGFB2P61812 414 aa11.06□□□□□ -0.64
SCAMP1-202ENST00000506858 CCDC152Q4G0S7 254 aa11.06□□□□□ -0.64
SCAMP1-202ENST00000506858 DDX46Q7L014 1031 aaKnown RBP11.06□□□□□ -0.64
SCAMP1-202ENST00000506858 SIRT2Q8IXJ6 389 aa11.06□□□□□ -0.64
SCAMP1-202ENST00000506858 MASTLQ96GX5 879 aa11.06□□□□□ -0.64
SCAMP1-202ENST00000506858 PUS3Q9BZE2 481 aaKnown RBP11.06□□□□□ -0.64
SCAMP1-202ENST00000506858 BCS1LQ9Y276 419 aa11.06□□□□□ -0.64
SCAMP1-202ENST00000506858 COL11A2P13942 1736 aaPredicted RBP11.05□□□□□ -0.64
SCAMP1-202ENST00000506858 RABL6Q3YEC7 729 aaPredicted RBP11.05□□□□□ -0.64
SCAMP1-202ENST00000506858 PRPF40BQ6NWY9 871 aaKnown RBP11.05□□□□□ -0.64
SCAMP1-202ENST00000506858 CEP85Q6P2H3 762 aa11.05□□□□□ -0.64
SCAMP1-202ENST00000506858 RBM17Q96I25 401 aaKnown RBP11.05□□□□□ -0.64
SCAMP1-202ENST00000506858 SIL1Q9H173 461 aa11.05□□□□□ -0.64
SCAMP1-202ENST00000506858 PIM2Q9P1W9 311 aa11.05□□□□□ -0.64
SCAMP1-202ENST00000506858 LAMB2P55268 1798 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms