RNA–Protein interactions for RNA: ENST00000506789.5

CDK7-205, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-205ENST00000506789 GRM8O00222 908 aa16.12■□□□□ 0.17
CDK7-205ENST00000506789 BBOX1O75936 387 aa16.12■□□□□ 0.17
CDK7-205ENST00000506789 FRAT1Q92837 279 aaPredicted RBP16.12■□□□□ 0.17
CDK7-205ENST00000506789 TNRC6CQ9HCJ0 1690 aaKnown RBP16.11■□□□□ 0.17
CDK7-205ENST00000506789 LAMB2P55268 1798 aa16.11■□□□□ 0.17
CDK7-205ENST00000506789 CCDC93Q567U6 631 aa16.11■□□□□ 0.17
CDK7-205ENST00000506789 ZKSCAN2Q63HK3 967 aa16.11■□□□□ 0.17
CDK7-205ENST00000506789 SYNE4Q8N205 404 aa16.11■□□□□ 0.17
CDK7-205ENST00000506789 C21orf2O43822 256 aa16.1■□□□□ 0.17
CDK7-205ENST00000506789 MS4A1P11836 297 aa16.1■□□□□ 0.17
CDK7-205ENST00000506789 CTSWP56202 376 aa16.1■□□□□ 0.17
CDK7-205ENST00000506789 GRAPQ13588 217 aa16.1■□□□□ 0.17
CDK7-205ENST00000506789 ATF7IPQ6VMQ6 1270 aa16.1■□□□□ 0.17
CDK7-205ENST00000506789 RTKN2Q8IZC4 609 aa16.1■□□□□ 0.17
CDK7-205ENST00000506789 ZNF784Q8NCA9 323 aaPredicted RBP16.1■□□□□ 0.17
CDK7-205ENST00000506789 GRAPLQ8TC17 118 aaPredicted RBP16.1■□□□□ 0.17
CDK7-205ENST00000506789 DDX60Q8IY21 1712 aaKnown RBP16.09■□□□□ 0.17
CDK7-205ENST00000506789 PPEF1O14829 653 aaPredicted RBP16.09■□□□□ 0.17
CDK7-205ENST00000506789 BCAR3O75815 825 aa16.09■□□□□ 0.17
CDK7-205ENST00000506789 CDC5LQ99459 802 aaKnown RBP16.09■□□□□ 0.17
CDK7-205ENST00000506789 PLA2G12BQ9BX93 195 aa16.09■□□□□ 0.17
CDK7-205ENST00000506789 C3orf67Q6ZVT6 689 aa16.08■□□□□ 0.16
CDK7-205ENST00000506789 FTSJ3Q8IY81 847 aaKnown RBP16.08■□□□□ 0.16
CDK7-205ENST00000506789 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.08■□□□□ 0.16
CDK7-205ENST00000506789 ZNF219Q9P2Y4 722 aaPredicted RBP16.08■□□□□ 0.16
CDK7-205ENST00000506789 RCAN3Q9UKA8 241 aa16.08■□□□□ 0.16
CDK7-205ENST00000506789 ABCC4O15439 1325 aa16.08■□□□□ 0.16
CDK7-205ENST00000506789 SAMD1Q6SPF0 538 aaPredicted RBP16.07■□□□□ 0.16
CDK7-205ENST00000506789 JARID2Q92833 1246 aaPredicted RBP16.07■□□□□ 0.16
CDK7-205ENST00000506789 RTL9Q8NET4 1388 aa16.06■□□□□ 0.16
CDK7-205ENST00000506789 LTBP3Q9NS15 1303 aa16.06■□□□□ 0.16
CDK7-205ENST00000506789 ANKRD18AQ8IVF6 992 aa16.06■□□□□ 0.16
CDK7-205ENST00000506789 TAOK3Q9H2K8 898 aa16.06■□□□□ 0.16
CDK7-205ENST00000506789 ATP6V0A2Q9Y487 856 aa16.06■□□□□ 0.16
CDK7-205ENST00000506789 CACNA1SQ13698 1873 aa16.05■□□□□ 0.16
CDK7-205ENST00000506789 UTYO14607 1347 aa16.05■□□□□ 0.16
CDK7-205ENST00000506789 GNAI3P08754 354 aa16.05■□□□□ 0.16
CDK7-205ENST00000506789 TRIM27P14373 513 aa16.05■□□□□ 0.16
CDK7-205ENST00000506789 IGHMBP2P38935 993 aaKnown RBP16.05■□□□□ 0.16
CDK7-205ENST00000506789 CASP7P55210 303 aa16.05■□□□□ 0.16
CDK7-205ENST00000506789 RPS8P62241 208 aaKnown RBP16.05■□□□□ 0.16
CDK7-205ENST00000506789 INTS3Q68E01 1043 aaKnown RBP16.05■□□□□ 0.16
CDK7-205ENST00000506789 SP8Q8IXZ3 490 aa16.05■□□□□ 0.16
CDK7-205ENST00000506789 SUPT20HQ8NEM7 779 aa16.05■□□□□ 0.16
CDK7-205ENST00000506789 TTLL11Q8NHH1 800 aa16.05■□□□□ 0.16
CDK7-205ENST00000506789 C7orf43Q8WVR3 580 aa16.05■□□□□ 0.16
CDK7-205ENST00000506789 CHMP3Q9Y3E7 222 aa16.05■□□□□ 0.16
CDK7-205ENST00000506789 SLX4Q8IY92 1834 aa16.05■□□□□ 0.16
CDK7-205ENST00000506789 GOLGB1Q14789 3259 aaKnown RBP16.04■□□□□ 0.16
CDK7-205ENST00000506789 MYH3P11055 1940 aa16.04■□□□□ 0.16
CDK7-205ENST00000506789 CHD4Q14839 1912 aa16.04■□□□□ 0.16
CDK7-205ENST00000506789 UBTFL1P0CB47 393 aaPredicted RBP16.04■□□□□ 0.16
CDK7-205ENST00000506789 LMNB1P20700 586 aa16.04■□□□□ 0.16
CDK7-205ENST00000506789 FKBP4Q02790 459 aaKnown RBP eCLIP16.04■□□□□ 0.16
CDK7-205ENST00000506789 IFIT5Q13325 482 aaKnown RBP16.04■□□□□ 0.16
CDK7-205ENST00000506789 ANKRD18BA2A2Z9 1011 aa16.03■□□□□ 0.16
CDK7-205ENST00000506789 CSF1RP07333 972 aa16.03■□□□□ 0.16
CDK7-205ENST00000506789 DSG3P32926 999 aa16.03■□□□□ 0.16
CDK7-205ENST00000506789 CCDC57Q2TAC2 916 aa16.03■□□□□ 0.16
CDK7-205ENST00000506789 TAF7LQ5H9L4 462 aa16.03■□□□□ 0.16
CDK7-205ENST00000506789 DZIP1LQ8IYY4 767 aaKnown RBP16.03■□□□□ 0.16
CDK7-205ENST00000506789 PSMD1Q99460 953 aa16.03■□□□□ 0.16
CDK7-205ENST00000506789 MPHOSPH8Q99549 860 aa16.03■□□□□ 0.16
CDK7-205ENST00000506789 ZC3H4Q9UPT8 1303 aaKnown RBP16.02■□□□□ 0.16
CDK7-205ENST00000506789 NBPF7P0C2Y1 421 aaPredicted RBP16.02■□□□□ 0.16
CDK7-205ENST00000506789 ITGA6P23229 1130 aa16.02■□□□□ 0.16
CDK7-205ENST00000506789 DPP8Q6V1X1 898 aaPredicted RBP16.02■□□□□ 0.16
CDK7-205ENST00000506789 MPNDQ8N594 471 aa16.02■□□□□ 0.16
CDK7-205ENST00000506789 CLUAP1Q96AJ1 413 aa16.02■□□□□ 0.16
CDK7-205ENST00000506789 CCDC85AQ96PX6 553 aaPredicted RBP16.02■□□□□ 0.16
CDK7-205ENST00000506789 USP44Q9H0E7 712 aa16.02■□□□□ 0.16
CDK7-205ENST00000506789 VPS33BQ9H267 617 aa16.02■□□□□ 0.16
CDK7-205ENST00000506789 CHMP4BQ9H444 224 aaKnown RBP16.02■□□□□ 0.16
CDK7-205ENST00000506789 GREM2Q9H772 168 aa16.02■□□□□ 0.16
CDK7-205ENST00000506789 RNF181Q9P0P0 153 aa16.02■□□□□ 0.16
CDK7-205ENST00000506789 C9orf131Q5VYM1 1079 aa16.01■□□□□ 0.15
CDK7-205ENST00000506789 LMBR1LQ6UX01 489 aa16.01■□□□□ 0.15
CDK7-205ENST00000506789 CELF1Q92879 486 aaKnown RBP16.01■□□□□ 0.15
CDK7-205ENST00000506789 SEC31BQ9NQW1 1179 aa16.01■□□□□ 0.15
CDK7-205ENST00000506789 NFKBIEO00221 500 aa16■□□□□ 0.15
CDK7-205ENST00000506789 FOXO4P98177 505 aa16■□□□□ 0.15
CDK7-205ENST00000506789 RASSF7Q02833 373 aa16■□□□□ 0.15
CDK7-205ENST00000506789 FAM161AQ3B820 660 aa16■□□□□ 0.15
CDK7-205ENST00000506789 SUCLG2Q96I99 432 aa16■□□□□ 0.15
CDK7-205ENST00000506789 BSDC1Q9NW68 430 aaPredicted RBP16■□□□□ 0.15
CDK7-205ENST00000506789 FER1L6Q2WGJ9 1857 aa15.99■□□□□ 0.15
CDK7-205ENST00000506789 ITPRIPQ8IWB1 547 aa15.99■□□□□ 0.15
CDK7-205ENST00000506789 JDP2Q8WYK2 163 aa15.99■□□□□ 0.15
CDK7-205ENST00000506789 EYA3Q99504 573 aa15.99■□□□□ 0.15
CDK7-205ENST00000506789 ANKIB1Q9P2G1 1089 aa15.99■□□□□ 0.15
CDK7-205ENST00000506789 RABL6Q3YEC7 729 aaPredicted RBP15.98■□□□□ 0.15
CDK7-205ENST00000506789 ANKRD2Q9GZV1 360 aa15.98■□□□□ 0.15
CDK7-205ENST00000506789 BICC1Q9H694 974 aaKnown RBP15.98■□□□□ 0.15
CDK7-205ENST00000506789 NSFL1CQ9UNZ2 370 aaKnown RBP15.98■□□□□ 0.15
CDK7-205ENST00000506789 XDHP47989 1333 aa15.97■□□□□ 0.15
CDK7-205ENST00000506789 GNAI2P04899 355 aa15.97■□□□□ 0.15
CDK7-205ENST00000506789 IARSP41252 1262 aaKnown RBP15.97■□□□□ 0.15
CDK7-205ENST00000506789 TMEM57Q8N5G2 664 aa15.97■□□□□ 0.15
CDK7-205ENST00000506789 RTFDC1Q9BY42 306 aaPredicted RBP15.97■□□□□ 0.15
CDK7-205ENST00000506789 UTRNP46939 3433 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 291.3 ms