RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 EIF5P55010 431 aaKnown RBP14.78□□□□□ -0.04
LIN54-206ENST00000506560 GREM2Q9H772 168 aa14.78□□□□□ -0.04
LIN54-206ENST00000506560 EIF5BO60841 1220 aaKnown RBP14.78□□□□□ -0.04
LIN54-206ENST00000506560 IL6STP40189 918 aaPredicted RBP14.78□□□□□ -0.04
LIN54-206ENST00000506560 DDX46Q7L014 1031 aaKnown RBP14.78□□□□□ -0.04
LIN54-206ENST00000506560 CCDC87Q9NVE4 849 aa14.78□□□□□ -0.04
LIN54-206ENST00000506560 TRMT112Q9UI30 125 aaKnown RBP14.78□□□□□ -0.04
LIN54-206ENST00000506560 SNX14Q9Y5W7 946 aa14.78□□□□□ -0.04
LIN54-206ENST00000506560 JCADQ9P266 1359 aa14.78□□□□□ -0.04
LIN54-206ENST00000506560 ST18O60284 1047 aa14.77□□□□□ -0.04
LIN54-206ENST00000506560 SSFA2P28290 1259 aa14.77□□□□□ -0.04
LIN54-206ENST00000506560 TNPO1Q92973 898 aaKnown RBP14.77□□□□□ -0.04
LIN54-206ENST00000506560 SEC62Q99442 399 aaKnown RBP14.77□□□□□ -0.04
LIN54-206ENST00000506560 TAF6LQ9Y6J9 622 aa14.77□□□□□ -0.04
LIN54-206ENST00000506560 ATP5JP18859 108 aa14.77□□□□□ -0.05
LIN54-206ENST00000506560 ADORA1P30542 326 aa14.77□□□□□ -0.05
LIN54-206ENST00000506560 CCDC57Q2TAC2 916 aa14.77□□□□□ -0.05
LIN54-206ENST00000506560 ADCK5Q3MIX3 580 aa14.77□□□□□ -0.05
LIN54-206ENST00000506560 MCCP23508 829 aa14.76□□□□□ -0.05
LIN54-206ENST00000506560 VPS72Q15906 364 aa14.76□□□□□ -0.05
LIN54-206ENST00000506560 TTLL11Q8NHH1 800 aa14.76□□□□□ -0.05
LIN54-206ENST00000506560 A0A1B0GUL7 405 aa14.76□□□□□ -0.05
LIN54-206ENST00000506560 IRS4O14654 1257 aaPredicted RBP14.76□□□□□ -0.05
LIN54-206ENST00000506560 CSF1RP07333 972 aa14.76□□□□□ -0.05
LIN54-206ENST00000506560 IL15P40933 162 aaPredicted RBP14.76□□□□□ -0.05
LIN54-206ENST00000506560 PRPF40BQ6NWY9 871 aaKnown RBP14.76□□□□□ -0.05
LIN54-206ENST00000506560 CCDC129Q6ZRS4 1044 aa14.76□□□□□ -0.05
LIN54-206ENST00000506560 TMX3Q96JJ7 454 aa14.76□□□□□ -0.05
LIN54-206ENST00000506560 USP21Q9UK80 565 aa14.76□□□□□ -0.05
LIN54-206ENST00000506560 HCLS1P14317 486 aaPredicted RBP14.75□□□□□ -0.05
LIN54-206ENST00000506560 MCM4P33991 863 aa14.75□□□□□ -0.05
LIN54-206ENST00000506560 KIAA1211Q6ZU35 1233 aa14.75□□□□□ -0.05
LIN54-206ENST00000506560 SUSD4Q5VX71 490 aa14.75□□□□□ -0.05
LIN54-206ENST00000506560 LINC00116Q8NCU8 138 aa14.75□□□□□ -0.05
LIN54-206ENST00000506560 CHAMP1Q96JM3 812 aa14.75□□□□□ -0.05
LIN54-206ENST00000506560 ZNF609O15014 1411 aa14.75□□□□□ -0.05
LIN54-206ENST00000506560 ANKRD36CQ5JPF3 1778 aa14.75□□□□□ -0.05
LIN54-206ENST00000506560 ITGA6P23229 1130 aa14.74□□□□□ -0.05
LIN54-206ENST00000506560 RAB3GAP1Q15042 981 aa14.74□□□□□ -0.05
LIN54-206ENST00000506560 ZNF34Q8IZ26 560 aa14.74□□□□□ -0.05
LIN54-206ENST00000506560 FNBP4Q8N3X1 1017 aaPredicted RBP14.74□□□□□ -0.05
LIN54-206ENST00000506560 PLA2G12BQ9BX93 195 aa14.74□□□□□ -0.05
LIN54-206ENST00000506560 CCDC171Q6TFL3 1326 aa14.74□□□□□ -0.05
LIN54-206ENST00000506560 ANAPC15P60006 121 aa14.74□□□□□ -0.05
LIN54-206ENST00000506560 GOLIM4O00461 696 aa14.73□□□□□ -0.05
LIN54-206ENST00000506560 CAMTA2O94983 1202 aa14.73□□□□□ -0.05
LIN54-206ENST00000506560 CTSWP56202 376 aa14.73□□□□□ -0.05
LIN54-206ENST00000506560 IFIT5Q13325 482 aaKnown RBP14.73□□□□□ -0.05
LIN54-206ENST00000506560 HAUS7Q99871 368 aa14.73□□□□□ -0.05
LIN54-206ENST00000506560 SNRKQ9NRH2 765 aa14.73□□□□□ -0.05
LIN54-206ENST00000506560 HSPA1LP34931 641 aa14.73□□□□□ -0.05
LIN54-206ENST00000506560 TAF7LQ5H9L4 462 aa14.73□□□□□ -0.05
LIN54-206ENST00000506560 PI16Q6UXB8 463 aa14.73□□□□□ -0.05
LIN54-206ENST00000506560 RUFY2Q8WXA3 655 aa14.73□□□□□ -0.05
LIN54-206ENST00000506560 RBM8AQ9Y5S9 174 aaKnown RBP14.73□□□□□ -0.05
LIN54-206ENST00000506560 ERVV-1B6SEH8 477 aa14.73□□□□□ -0.05
LIN54-206ENST00000506560 SNAP23O00161 211 aa14.73□□□□□ -0.05
LIN54-206ENST00000506560 SCARF1Q14162 830 aa14.73□□□□□ -0.05
LIN54-206ENST00000506560 CEP126Q9P2H0 1117 aa14.73□□□□□ -0.05
LIN54-206ENST00000506560 CDHR2Q9BYE9 1310 aa14.72□□□□□ -0.05
LIN54-206ENST00000506560 HSP90AB3PQ58FF7 597 aa14.72□□□□□ -0.05
LIN54-206ENST00000506560 IL17RAQ96F46 866 aa14.72□□□□□ -0.05
LIN54-206ENST00000506560 MED23Q9ULK4 1368 aa14.72□□□□□ -0.05
LIN54-206ENST00000506560 RIC1Q4ADV7 1423 aa14.72□□□□□ -0.05
LIN54-206ENST00000506560 CIAO1O76071 339 aa14.72□□□□□ -0.05
LIN54-206ENST00000506560 NECTIN1Q15223 517 aa14.72□□□□□ -0.05
LIN54-206ENST00000506560 FOXD4L5Q5VV16 416 aaPredicted RBP14.71□□□□□ -0.05
LIN54-206ENST00000506560 LDHAL6AQ6ZMR3 332 aa14.71□□□□□ -0.05
LIN54-206ENST00000506560 AMIGO3Q86WK7 504 aa14.71□□□□□ -0.05
LIN54-206ENST00000506560 HELBQ8NG08 1087 aaPredicted RBP14.71□□□□□ -0.05
LIN54-206ENST00000506560 FOXD4L4Q8WXT5 416 aaPredicted RBP14.71□□□□□ -0.05
LIN54-206ENST00000506560 TCEANC2Q96MN5 208 aa14.71□□□□□ -0.05
LIN54-206ENST00000506560 MYH3P11055 1940 aa14.71□□□□□ -0.05
LIN54-206ENST00000506560 CASTP20810 708 aaKnown RBP14.71□□□□□ -0.06
LIN54-206ENST00000506560 MAP4K1Q92918 833 aa14.71□□□□□ -0.06
LIN54-206ENST00000506560 XAGE2Q96GT9 111 aa14.71□□□□□ -0.06
LIN54-206ENST00000506560 SEC31BQ9NQW1 1179 aa14.71□□□□□ -0.06
LIN54-206ENST00000506560 CIZ1Q9ULV3 898 aaPredicted RBP14.71□□□□□ -0.06
LIN54-206ENST00000506560 RIPOR2Q9Y4F9 1068 aa14.71□□□□□ -0.06
LIN54-206ENST00000506560 JAKMIP1Q96N16 626 aaKnown RBP14.7□□□□□ -0.06
LIN54-206ENST00000506560 TTC14Q96N46 770 aa14.7□□□□□ -0.06
LIN54-206ENST00000506560 ZDHHC9Q9Y397 364 aa14.7□□□□□ -0.06
LIN54-206ENST00000506560 LARGE1O95461 756 aa14.7□□□□□ -0.06
LIN54-206ENST00000506560 AK2P54819 239 aa14.7□□□□□ -0.06
LIN54-206ENST00000506560 CREB3L3Q68CJ9 461 aa14.7□□□□□ -0.06
LIN54-206ENST00000506560 CERKQ8TCT0 537 aa14.7□□□□□ -0.06
LIN54-206ENST00000506560 PAG1Q9NWQ8 432 aa14.7□□□□□ -0.06
LIN54-206ENST00000506560 NIP7Q9Y221 180 aaKnown RBP eCLIP14.7□□□□□ -0.06
LIN54-206ENST00000506560 COL4A1P02462 1669 aa14.7□□□□□ -0.06
LIN54-206ENST00000506560 PDE8AO60658 829 aa14.69□□□□□ -0.06
LIN54-206ENST00000506560 TAF5LO75529 589 aa14.69□□□□□ -0.06
LIN54-206ENST00000506560 KCNJ4P48050 445 aa14.69□□□□□ -0.06
LIN54-206ENST00000506560 GSE1Q14687 1217 aa14.69□□□□□ -0.06
LIN54-206ENST00000506560 GPR108Q9NPR9 543 aa14.69□□□□□ -0.06
LIN54-206ENST00000506560 A0A0G2JLW4 131 aa14.69□□□□□ -0.06
LIN54-206ENST00000506560 IFIT1P09914 478 aaKnown RBP14.69□□□□□ -0.06
LIN54-206ENST00000506560 FKBP4Q02790 459 aaKnown RBP eCLIP14.69□□□□□ -0.06
LIN54-206ENST00000506560 METTL24Q5JXM2 366 aa14.69□□□□□ -0.06
LIN54-206ENST00000506560 RUFY3Q7L099 469 aa14.69□□□□□ -0.06
LIN54-206ENST00000506560 KBTBD3Q8NAB2 608 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms