RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 CPNE3O75131 537 aaKnown RBP9.89□□□□□ -0.83
HERC4-213ENST00000506515 PHACTR2O75167 634 aa9.89□□□□□ -0.83
HERC4-213ENST00000506515 TARSP26639 723 aaKnown RBP9.89□□□□□ -0.83
HERC4-213ENST00000506515 TTC39BQ5VTQ0 682 aaPredicted RBP9.89□□□□□ -0.83
HERC4-213ENST00000506515 FOXR1Q6PIV2 292 aa9.89□□□□□ -0.83
HERC4-213ENST00000506515 PNMA5Q96PV4 448 aa9.89□□□□□ -0.83
HERC4-213ENST00000506515 C11orf16Q9NQ32 467 aa9.89□□□□□ -0.83
HERC4-213ENST00000506515 ABI2Q9NYB9 513 aaPredicted RBP9.89□□□□□ -0.83
HERC4-213ENST00000506515 ATXN7L1Q9ULK2 861 aaPredicted RBP9.89□□□□□ -0.83
HERC4-213ENST00000506515 PRPF40AO75400 957 aaKnown RBP9.88□□□□□ -0.83
HERC4-213ENST00000506515 XPCQ01831 940 aaPredicted RBP9.88□□□□□ -0.83
HERC4-213ENST00000506515 SPEM2Q0P670 501 aa9.88□□□□□ -0.83
HERC4-213ENST00000506515 USPL1Q5W0Q7 1092 aa9.88□□□□□ -0.83
HERC4-213ENST00000506515 RAB44Q7Z6P3 723 aaPredicted RBP9.88□□□□□ -0.83
HERC4-213ENST00000506515 TRERF1Q96PN7 1200 aa9.88□□□□□ -0.83
HERC4-213ENST00000506515 DUSP9Q99956 384 aaKnown RBP9.88□□□□□ -0.83
HERC4-213ENST00000506515 DNAJC25Q9H1X3 360 aa9.88□□□□□ -0.83
HERC4-213ENST00000506515 RNF19AQ9NV58 838 aa9.88□□□□□ -0.83
HERC4-213ENST00000506515 PHF24Q9UPV7 400 aa9.88□□□□□ -0.83
HERC4-213ENST00000506515 FGFR3P22607 806 aa9.87□□□□□ -0.83
HERC4-213ENST00000506515 VEGFBP49765 207 aa9.87□□□□□ -0.83
HERC4-213ENST00000506515 FGD1P98174 961 aa9.87□□□□□ -0.83
HERC4-213ENST00000506515 ALG1LQ6GMV1 187 aa9.87□□□□□ -0.83
HERC4-213ENST00000506515 SV2AQ7L0J3 742 aa9.87□□□□□ -0.83
HERC4-213ENST00000506515 C1orf127Q8N9H9 656 aa9.87□□□□□ -0.83
HERC4-213ENST00000506515 SLC30A3Q99726 388 aa9.87□□□□□ -0.83
HERC4-213ENST00000506515 ZFYVE28Q9HCC9 887 aa9.87□□□□□ -0.83
HERC4-213ENST00000506515 KIAA1522Q9P206 1035 aaPredicted RBP9.87□□□□□ -0.83
HERC4-213ENST00000506515 CNTN3Q9P232 1028 aa9.87□□□□□ -0.83
HERC4-213ENST00000506515 PARP2Q9UGN5 583 aa9.87□□□□□ -0.83
HERC4-213ENST00000506515 RARAP10276 462 aa9.86□□□□□ -0.83
HERC4-213ENST00000506515 NFKB1P19838 968 aa9.86□□□□□ -0.83
HERC4-213ENST00000506515 BHMTQ93088 406 aa9.86□□□□□ -0.83
HERC4-213ENST00000506515 FAM161BQ96MY7 647 aa9.86□□□□□ -0.83
HERC4-213ENST00000506515 CFHR5Q9BXR6 569 aa9.86□□□□□ -0.83
HERC4-213ENST00000506515 BCL11AQ9H165 835 aa9.86□□□□□ -0.83
HERC4-213ENST00000506515 ZFATQ9P243 1243 aa9.86□□□□□ -0.83
HERC4-213ENST00000506515 POLR3DP05423 398 aaPredicted RBP9.85□□□□□ -0.83
HERC4-213ENST00000506515 CHRDQ9H2X0 955 aa9.85□□□□□ -0.83
HERC4-213ENST00000506515 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.85□□□□□ -0.83
HERC4-213ENST00000506515 EREGO14944 169 aa9.84□□□□□ -0.83
HERC4-213ENST00000506515 MMP20O60882 483 aa9.84□□□□□ -0.83
HERC4-213ENST00000506515 CYP2E1P05181 493 aaPredicted RBP9.84□□□□□ -0.83
HERC4-213ENST00000506515 CES1P23141 567 aa9.84□□□□□ -0.83
HERC4-213ENST00000506515 CTBSQ01459 385 aa9.84□□□□□ -0.83
HERC4-213ENST00000506515 CCDC74AQ96AQ1 378 aa9.84□□□□□ -0.83
HERC4-213ENST00000506515 NANOS1Q8WY41 292 aaKnown RBP9.83□□□□□ -0.84
HERC4-213ENST00000506515 MRS2Q9HD23 443 aa9.83□□□□□ -0.84
HERC4-213ENST00000506515 KANSL3Q9P2N6 904 aa9.83□□□□□ -0.84
HERC4-213ENST00000506515 NXF1Q9UBU9 619 aaKnown RBP9.83□□□□□ -0.84
HERC4-213ENST00000506515 IRS1P35568 1242 aa9.82□□□□□ -0.84
HERC4-213ENST00000506515 PSMD2Q13200 908 aa9.82□□□□□ -0.84
HERC4-213ENST00000506515 EPS8L3Q8TE67 593 aaKnown RBP9.82□□□□□ -0.84
HERC4-213ENST00000506515 FBF1Q8TES7 1133 aa9.82□□□□□ -0.84
HERC4-213ENST00000506515 PMEPA1Q969W9 287 aa9.82□□□□□ -0.84
HERC4-213ENST00000506515 PRR12Q9ULL5 1215 aa9.82□□□□□ -0.84
HERC4-213ENST00000506515 PHF20L1A8MW92 1017 aa9.81□□□□□ -0.84
HERC4-213ENST00000506515 NEUROD1Q13562 356 aa9.81□□□□□ -0.84
HERC4-213ENST00000506515 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.81□□□□□ -0.84
HERC4-213ENST00000506515 FAM182BQ5T319 152 aa9.81□□□□□ -0.84
HERC4-213ENST00000506515 PI16Q6UXB8 463 aa9.81□□□□□ -0.84
HERC4-213ENST00000506515 OR13H1Q8NG92 308 aa9.81□□□□□ -0.84
HERC4-213ENST00000506515 NPHS2Q9NP85 383 aa9.81□□□□□ -0.84
HERC4-213ENST00000506515 NLRP2Q9NX02 1062 aa9.81□□□□□ -0.84
HERC4-213ENST00000506515 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.81□□□□□ -0.84
HERC4-213ENST00000506515 PSAPP07602 524 aa9.8□□□□□ -0.84
HERC4-213ENST00000506515 BMP4P12644 408 aa9.8□□□□□ -0.84
HERC4-213ENST00000506515 DAB2P98082 770 aa9.8□□□□□ -0.84
HERC4-213ENST00000506515 TMC4Q7Z404 712 aa9.8□□□□□ -0.84
HERC4-213ENST00000506515 IGFLR1Q9H665 355 aa9.8□□□□□ -0.84
HERC4-213ENST00000506515 EFCC1Q9HA90 598 aa9.8□□□□□ -0.84
HERC4-213ENST00000506515 C2CD2LO14523 706 aa9.79□□□□□ -0.84
HERC4-213ENST00000506515 SORBS3O60504 671 aa9.79□□□□□ -0.84
HERC4-213ENST00000506515 GNA15P30679 374 aa9.79□□□□□ -0.84
HERC4-213ENST00000506515 TSNAXIP1Q2TAA8 658 aa9.79□□□□□ -0.84
HERC4-213ENST00000506515 DHX32Q7L7V1 743 aaKnown RBP9.79□□□□□ -0.84
HERC4-213ENST00000506515 TLR7Q9NYK1 1049 aaKnown RBP9.79□□□□□ -0.84
HERC4-213ENST00000506515 SPG7Q9UQ90 795 aa9.79□□□□□ -0.84
HERC4-213ENST00000506515 GADD45BO75293 160 aaPredicted RBP9.78□□□□□ -0.84
HERC4-213ENST00000506515 MX2P20592 715 aa9.78□□□□□ -0.84
HERC4-213ENST00000506515 TBC1D8BQ0IIM8 1120 aa9.78□□□□□ -0.84
HERC4-213ENST00000506515 ZNF787Q6DD87 383 aa9.78□□□□□ -0.84
HERC4-213ENST00000506515 GALNT12Q8IXK2 581 aa9.78□□□□□ -0.84
HERC4-213ENST00000506515 VTI1BQ9UEU0 232 aa9.78□□□□□ -0.84
HERC4-213ENST00000506515 MAP3K6O95382 1288 aa9.77□□□□□ -0.85
HERC4-213ENST00000506515 PLAURQ03405 335 aa9.77□□□□□ -0.85
HERC4-213ENST00000506515 MRPL58Q14197 206 aaKnown RBP9.77□□□□□ -0.85
HERC4-213ENST00000506515 SYT9Q86SS6 491 aa9.77□□□□□ -0.85
HERC4-213ENST00000506515 NCAPG2Q86XI2 1143 aa9.77□□□□□ -0.85
HERC4-213ENST00000506515 GPR161Q8N6U8 529 aaKnown RBP9.77□□□□□ -0.85
HERC4-213ENST00000506515 NSUN5Q96P11 429 aaKnown RBP9.77□□□□□ -0.85
HERC4-213ENST00000506515 LATS2Q9NRM7 1088 aa9.77□□□□□ -0.85
HERC4-213ENST00000506515 VAMP1P23763 118 aa9.76□□□□□ -0.85
HERC4-213ENST00000506515 PCBP4P57723 403 aaKnown RBP9.76□□□□□ -0.85
HERC4-213ENST00000506515 COL13A1Q5TAT6 717 aaPredicted RBP9.76□□□□□ -0.85
HERC4-213ENST00000506515 SALL4Q9UJQ4 1053 aa9.76□□□□□ -0.85
HERC4-213ENST00000506515 H3BM21 787 aa9.75□□□□□ -0.85
HERC4-213ENST00000506515 RECKO95980 971 aa9.75□□□□□ -0.85
HERC4-213ENST00000506515 EDN3P14138 238 aa9.75□□□□□ -0.85
HERC4-213ENST00000506515 SOX18P35713 384 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms