RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 SASH1O94885 1247 aa14.72□□□□□ -0.05
POLR2J3-211ENST00000506060 NTSR2O95665 410 aa14.72□□□□□ -0.05
POLR2J3-211ENST00000506060 TTLL11Q8NHH1 800 aa14.72□□□□□ -0.05
POLR2J3-211ENST00000506060 OTUD7AQ8TE49 926 aaPredicted RBP14.72□□□□□ -0.05
POLR2J3-211ENST00000506060 CEP126Q9P2H0 1117 aa14.72□□□□□ -0.05
POLR2J3-211ENST00000506060 AKAP2Q9Y2D5 859 aa14.72□□□□□ -0.05
POLR2J3-211ENST00000506060 RGPD3A6NKT7 1758 aaPredicted RBP14.72□□□□□ -0.05
POLR2J3-211ENST00000506060 RGPD4Q7Z3J3 1758 aa14.72□□□□□ -0.05
POLR2J3-211ENST00000506060 LAMB2P55268 1798 aa14.71□□□□□ -0.05
POLR2J3-211ENST00000506060 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.71□□□□□ -0.05
POLR2J3-211ENST00000506060 FAM177BA6PVY3 158 aa14.71□□□□□ -0.05
POLR2J3-211ENST00000506060 NPHP1O15259 732 aa14.71□□□□□ -0.05
POLR2J3-211ENST00000506060 SF3B2Q13435 895 aaKnown RBP14.71□□□□□ -0.05
POLR2J3-211ENST00000506060 TPTE2Q6XPS3 522 aa14.71□□□□□ -0.05
POLR2J3-211ENST00000506060 NBPF5PQ86XG9 351 aaPredicted RBP14.71□□□□□ -0.05
POLR2J3-211ENST00000506060 NUTM1Q86Y26 1132 aa14.71□□□□□ -0.05
POLR2J3-211ENST00000506060 KLHDC4Q8TBB5 520 aa14.71□□□□□ -0.05
POLR2J3-211ENST00000506060 ECHDC1Q9NTX5 307 aa14.71□□□□□ -0.05
POLR2J3-211ENST00000506060 UBR3Q6ZT12 1888 aa14.71□□□□□ -0.05
POLR2J3-211ENST00000506060 RTL9Q8NET4 1388 aa14.71□□□□□ -0.06
POLR2J3-211ENST00000506060 GSPT1P15170 499 aaKnown RBP14.7□□□□□ -0.06
POLR2J3-211ENST00000506060 ITGA6P23229 1130 aa14.7□□□□□ -0.06
POLR2J3-211ENST00000506060 TBC1D9BQ66K14 1250 aa14.7□□□□□ -0.06
POLR2J3-211ENST00000506060 SRP68Q9UHB9 627 aaKnown RBP14.7□□□□□ -0.06
POLR2J3-211ENST00000506060 C4AP0C0L4 1744 aa14.69□□□□□ -0.06
POLR2J3-211ENST00000506060 TRIM6-TRIM34B2RNG4 842 aa14.69□□□□□ -0.06
POLR2J3-211ENST00000506060 HCLS1P14317 486 aaPredicted RBP14.69□□□□□ -0.06
POLR2J3-211ENST00000506060 SDSP20132 328 aa14.69□□□□□ -0.06
POLR2J3-211ENST00000506060 TFCP2Q12800 502 aa14.69□□□□□ -0.06
POLR2J3-211ENST00000506060 TNNI3KQ59H18 835 aa14.69□□□□□ -0.06
POLR2J3-211ENST00000506060 SLC10A5Q5PT55 438 aa14.69□□□□□ -0.06
POLR2J3-211ENST00000506060 LDHAL6AQ6ZMR3 332 aa14.69□□□□□ -0.06
POLR2J3-211ENST00000506060 BICDL1Q6ZP65 573 aa14.69□□□□□ -0.06
POLR2J3-211ENST00000506060 CNTROBQ8N137 903 aa14.69□□□□□ -0.06
POLR2J3-211ENST00000506060 CDC5LQ99459 802 aaKnown RBP14.69□□□□□ -0.06
POLR2J3-211ENST00000506060 TFCP2L1Q9NZI6 479 aa14.69□□□□□ -0.06
POLR2J3-211ENST00000506060 FPGT-TNNI3KV9GXZ4 949 aa14.69□□□□□ -0.06
POLR2J3-211ENST00000506060 CARMIL3Q8ND23 1372 aa14.69□□□□□ -0.06
POLR2J3-211ENST00000506060 SYNE4Q8N205 404 aa14.68□□□□□ -0.06
POLR2J3-211ENST00000506060 GREM2Q9H772 168 aa14.68□□□□□ -0.06
POLR2J3-211ENST00000506060 BCL2L12Q9HB09 334 aa14.68□□□□□ -0.06
POLR2J3-211ENST00000506060 CNNM1Q9NRU3 951 aa14.68□□□□□ -0.06
POLR2J3-211ENST00000506060 COL24A1Q17RW2 1714 aa14.68□□□□□ -0.06
POLR2J3-211ENST00000506060 TNS1Q9HBL0 1735 aaKnown RBP14.67□□□□□ -0.06
POLR2J3-211ENST00000506060 IGHMBP2P38935 993 aaKnown RBP14.67□□□□□ -0.06
POLR2J3-211ENST00000506060 TBC1D9Q6ZT07 1266 aa14.67□□□□□ -0.06
POLR2J3-211ENST00000506060 ATG9AQ7Z3C6 839 aa14.67□□□□□ -0.06
POLR2J3-211ENST00000506060 RILPL2Q969X0 211 aa14.67□□□□□ -0.06
POLR2J3-211ENST00000506060 EAF2Q96CJ1 260 aaPredicted RBP14.67□□□□□ -0.06
POLR2J3-211ENST00000506060 ZNF594Q96JF6 807 aaPredicted RBP14.67□□□□□ -0.06
POLR2J3-211ENST00000506060 NLRP3Q96P20 1036 aa14.67□□□□□ -0.06
POLR2J3-211ENST00000506060 MPHOSPH8Q99549 860 aa14.67□□□□□ -0.06
POLR2J3-211ENST00000506060 MROH5Q6ZUA9 1318 aa14.66□□□□□ -0.06
POLR2J3-211ENST00000506060 SF3B3Q15393 1217 aaKnown RBP14.66□□□□□ -0.06
POLR2J3-211ENST00000506060 ERFEQ4G0M1 354 aa14.66□□□□□ -0.06
POLR2J3-211ENST00000506060 METTL24Q5JXM2 366 aa14.66□□□□□ -0.06
POLR2J3-211ENST00000506060 PROM2Q8N271 834 aa14.66□□□□□ -0.06
POLR2J3-211ENST00000506060 PI4K2BQ8TCG2 481 aa14.66□□□□□ -0.06
POLR2J3-211ENST00000506060 CCDC85AQ96PX6 553 aaPredicted RBP14.66□□□□□ -0.06
POLR2J3-211ENST00000506060 CCDC8Q9H0W5 538 aaPredicted RBP14.66□□□□□ -0.06
POLR2J3-211ENST00000506060 AK9Q5TCS8 1911 aa14.66□□□□□ -0.06
POLR2J3-211ENST00000506060 DDX60Q8IY21 1712 aaKnown RBP14.66□□□□□ -0.06
POLR2J3-211ENST00000506060 HIP1O00291 1037 aa14.65□□□□□ -0.06
POLR2J3-211ENST00000506060 REC8O95072 547 aa14.65□□□□□ -0.06
POLR2J3-211ENST00000506060 BAG6P46379 1132 aa14.65□□□□□ -0.06
POLR2J3-211ENST00000506060 MFAP1P55081 439 aaKnown RBP14.65□□□□□ -0.06
POLR2J3-211ENST00000506060 LRRC24Q50LG9 513 aa14.65□□□□□ -0.06
POLR2J3-211ENST00000506060 GORABQ5T7V8 394 aa14.65□□□□□ -0.06
POLR2J3-211ENST00000506060 DDRGK1Q96HY6 314 aa14.65□□□□□ -0.06
POLR2J3-211ENST00000506060 NEUROD6Q96NK8 337 aa14.65□□□□□ -0.06
POLR2J3-211ENST00000506060 GYS1P13807 737 aa14.64□□□□□ -0.07
POLR2J3-211ENST00000506060 ATP5JP18859 108 aa14.64□□□□□ -0.07
POLR2J3-211ENST00000506060 ST5P78524 1137 aa14.64□□□□□ -0.07
POLR2J3-211ENST00000506060 TSHZ3Q63HK5 1081 aa14.64□□□□□ -0.07
POLR2J3-211ENST00000506060 ANKRD18AQ8IVF6 992 aa14.64□□□□□ -0.07
POLR2J3-211ENST00000506060 NLGN1Q8N2Q7 840 aa14.64□□□□□ -0.07
POLR2J3-211ENST00000506060 CNBD1Q8NA66 436 aa14.64□□□□□ -0.07
POLR2J3-211ENST00000506060 AKT1S1Q96B36 256 aa14.64□□□□□ -0.07
POLR2J3-211ENST00000506060 EVI5LQ96CN4 794 aa14.64□□□□□ -0.07
POLR2J3-211ENST00000506060 RIPOR2Q9Y4F9 1068 aa14.64□□□□□ -0.07
POLR2J3-211ENST00000506060 MSH5O43196 834 aa14.63□□□□□ -0.07
POLR2J3-211ENST00000506060 NFIXQ14938 502 aa14.63□□□□□ -0.07
POLR2J3-211ENST00000506060 CCDC158Q5M9N0 1113 aa14.63□□□□□ -0.07
POLR2J3-211ENST00000506060 SMIM5Q71RC9 77 aa14.63□□□□□ -0.07
POLR2J3-211ENST00000506060 TICAM2Q86XR7 235 aa14.63□□□□□ -0.07
POLR2J3-211ENST00000506060 RUFY2Q8WXA3 655 aa14.63□□□□□ -0.07
POLR2J3-211ENST00000506060 PUS3Q9BZE2 481 aaKnown RBP14.63□□□□□ -0.07
POLR2J3-211ENST00000506060 TUBGCP6Q96RT7 1819 aa14.63□□□□□ -0.07
POLR2J3-211ENST00000506060 ZNF609O15014 1411 aa14.63□□□□□ -0.07
POLR2J3-211ENST00000506060 A0A1B0GUL7 405 aa14.62□□□□□ -0.07
POLR2J3-211ENST00000506060 ATP2B3Q16720 1220 aa14.62□□□□□ -0.07
POLR2J3-211ENST00000506060 RIC1Q4ADV7 1423 aa14.62□□□□□ -0.07
POLR2J3-211ENST00000506060 AMIGO3Q86WK7 504 aa14.62□□□□□ -0.07
POLR2J3-211ENST00000506060 STK32BQ9NY57 414 aa14.62□□□□□ -0.07
POLR2J3-211ENST00000506060 DBNLQ9UJU6 430 aaKnown RBP14.62□□□□□ -0.07
POLR2J3-211ENST00000506060 ABCC12Q96J65 1359 aa14.61□□□□□ -0.07
POLR2J3-211ENST00000506060 PUM3Q15397 648 aaKnown RBP14.61□□□□□ -0.07
POLR2J3-211ENST00000506060 LRRFIP1Q32MZ4 808 aaKnown RBP14.61□□□□□ -0.07
POLR2J3-211ENST00000506060 DDX46Q7L014 1031 aaKnown RBP14.61□□□□□ -0.07
POLR2J3-211ENST00000506060 CCDC125Q86Z20 511 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms