RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 NUP98P52948 1817 aa13.83□□□□□ -0.2
CPNE4-206ENST00000505957 TRAF5O00463 557 aa13.83□□□□□ -0.2
CPNE4-206ENST00000505957 CXCL9Q07325 125 aa13.83□□□□□ -0.2
CPNE4-206ENST00000505957 NFE2L2Q16236 605 aa13.83□□□□□ -0.2
CPNE4-206ENST00000505957 AOC3Q16853 763 aa13.83□□□□□ -0.2
CPNE4-206ENST00000505957 C3orf67Q6ZVT6 689 aa13.83□□□□□ -0.2
CPNE4-206ENST00000505957 PAXIP1Q6ZW49 1069 aaPredicted RBP13.83□□□□□ -0.2
CPNE4-206ENST00000505957 WWC1Q8IX03 1113 aa13.83□□□□□ -0.2
CPNE4-206ENST00000505957 PGAP2Q9UHJ9 254 aa13.83□□□□□ -0.2
CPNE4-206ENST00000505957 CDHR2Q9BYE9 1310 aa13.83□□□□□ -0.2
CPNE4-206ENST00000505957 TCERG1O14776 1098 aaKnown RBP13.82□□□□□ -0.2
CPNE4-206ENST00000505957 CA12O43570 354 aa13.82□□□□□ -0.2
CPNE4-206ENST00000505957 BBOX1O75936 387 aa13.82□□□□□ -0.2
CPNE4-206ENST00000505957 SLC34A2O95436 690 aa13.82□□□□□ -0.2
CPNE4-206ENST00000505957 RGS19P49795 217 aa13.82□□□□□ -0.2
CPNE4-206ENST00000505957 LRP10Q7Z4F1 713 aa13.82□□□□□ -0.2
CPNE4-206ENST00000505957 SAPCD2Q86UD0 394 aa13.82□□□□□ -0.2
CPNE4-206ENST00000505957 SP8Q8IXZ3 490 aa13.82□□□□□ -0.2
CPNE4-206ENST00000505957 ZC3H15Q8WU90 426 aaKnown RBP13.82□□□□□ -0.2
CPNE4-206ENST00000505957 CDCA7LQ96GN5 454 aa13.82□□□□□ -0.2
CPNE4-206ENST00000505957 UTP14AQ9BVJ6 771 aaKnown RBP13.82□□□□□ -0.2
CPNE4-206ENST00000505957 SALL2Q9Y467 1007 aaPredicted RBP13.82□□□□□ -0.2
CPNE4-206ENST00000505957 MAPK8IP3Q9UPT6 1336 aa13.82□□□□□ -0.2
CPNE4-206ENST00000505957 FAM161AQ3B820 660 aa13.81□□□□□ -0.2
CPNE4-206ENST00000505957 SLC51AQ86UW1 340 aa13.81□□□□□ -0.2
CPNE4-206ENST00000505957 ABCC4O15439 1325 aa13.81□□□□□ -0.2
CPNE4-206ENST00000505957 IL16Q14005 1332 aa13.81□□□□□ -0.2
CPNE4-206ENST00000505957 CELF2O95319 508 aaKnown RBP13.8□□□□□ -0.2
CPNE4-206ENST00000505957 KIAA2012Q0VF49 1180 aa13.8□□□□□ -0.2
CPNE4-206ENST00000505957 GRM1Q13255 1194 aa13.8□□□□□ -0.2
CPNE4-206ENST00000505957 PDIA6Q15084 440 aa13.8□□□□□ -0.2
CPNE4-206ENST00000505957 CIAPIN1Q6FI81 312 aa13.8□□□□□ -0.2
CPNE4-206ENST00000505957 THUMPD2Q9BTF0 503 aaKnown RBP13.8□□□□□ -0.2
CPNE4-206ENST00000505957 BABAM1Q9NWV8 329 aa13.8□□□□□ -0.2
CPNE4-206ENST00000505957 RCAN3Q9UKA8 241 aa13.8□□□□□ -0.2
CPNE4-206ENST00000505957 AOC2O75106 756 aa13.79□□□□□ -0.2
CPNE4-206ENST00000505957 TMPOP42166 694 aaKnown RBP13.79□□□□□ -0.2
CPNE4-206ENST00000505957 GMPSP49915 693 aaPredicted RBP13.79□□□□□ -0.2
CPNE4-206ENST00000505957 BRPF1P55201 1214 aaPredicted RBP13.79□□□□□ -0.2
CPNE4-206ENST00000505957 MLLT1Q03111 559 aaPredicted RBP13.79□□□□□ -0.2
CPNE4-206ENST00000505957 TNIP1Q15025 636 aa13.79□□□□□ -0.2
CPNE4-206ENST00000505957 HSP90AB3PQ58FF7 597 aa13.79□□□□□ -0.2
CPNE4-206ENST00000505957 DPP8Q6V1X1 898 aaPredicted RBP13.79□□□□□ -0.2
CPNE4-206ENST00000505957 MPNDQ8N594 471 aa13.79□□□□□ -0.2
CPNE4-206ENST00000505957 DLG5Q8TDM6 1919 aa13.79□□□□□ -0.2
CPNE4-206ENST00000505957 TRPM7Q96QT4 1865 aa13.78□□□□□ -0.2
CPNE4-206ENST00000505957 CCDC85CA6NKD9 419 aa13.78□□□□□ -0.2
CPNE4-206ENST00000505957 CDC37L1Q7L3B6 337 aa13.78□□□□□ -0.2
CPNE4-206ENST00000505957 TMC4Q7Z404 712 aa13.78□□□□□ -0.2
CPNE4-206ENST00000505957 BCL2L13Q9BXK5 485 aa13.78□□□□□ -0.2
CPNE4-206ENST00000505957 GLIS2Q9BZE0 524 aaPredicted RBP13.78□□□□□ -0.2
CPNE4-206ENST00000505957 TSPYL4Q9UJ04 414 aa13.78□□□□□ -0.2
CPNE4-206ENST00000505957 HIRAP54198 1017 aaPredicted RBP13.77□□□□□ -0.21
CPNE4-206ENST00000505957 RRP1P56182 461 aaKnown RBP13.77□□□□□ -0.21
CPNE4-206ENST00000505957 DDX46Q7L014 1031 aaKnown RBP13.77□□□□□ -0.21
CPNE4-206ENST00000505957 NLRP10Q86W26 655 aa13.77□□□□□ -0.21
CPNE4-206ENST00000505957 EIF2S2P20042 333 aaKnown RBP13.76□□□□□ -0.21
CPNE4-206ENST00000505957 GRAPQ13588 217 aa13.76□□□□□ -0.21
CPNE4-206ENST00000505957 GRAPLQ8TC17 118 aaPredicted RBP13.76□□□□□ -0.21
CPNE4-206ENST00000505957 CNOT7Q9UIV1 285 aaKnown RBP13.76□□□□□ -0.21
CPNE4-206ENST00000505957 TSKSQ9UJT2 592 aa13.76□□□□□ -0.21
CPNE4-206ENST00000505957 SH3TC1Q8TE82 1336 aa13.75□□□□□ -0.21
CPNE4-206ENST00000505957 H7C1D1 291 aa13.75□□□□□ -0.21
CPNE4-206ENST00000505957 RAD17O75943 681 aa13.75□□□□□ -0.21
CPNE4-206ENST00000505957 CT47B1P0C2W7 299 aaPredicted RBP13.75□□□□□ -0.21
CPNE4-206ENST00000505957 HCLS1P14317 486 aaPredicted RBP13.75□□□□□ -0.21
CPNE4-206ENST00000505957 NOGQ13253 232 aa13.75□□□□□ -0.21
CPNE4-206ENST00000505957 TCIRG1Q13488 830 aa13.75□□□□□ -0.21
CPNE4-206ENST00000505957 PROSER3Q2NL68 480 aa13.75□□□□□ -0.21
CPNE4-206ENST00000505957 COPS6Q7L5N1 327 aa13.75□□□□□ -0.21
CPNE4-206ENST00000505957 TRPM4Q8TD43 1214 aa13.75□□□□□ -0.21
CPNE4-206ENST00000505957 DPF2Q92785 391 aa13.75□□□□□ -0.21
CPNE4-206ENST00000505957 MCOLN1Q9GZU1 580 aa13.75□□□□□ -0.21
CPNE4-206ENST00000505957 SPINK5Q9NQ38 1064 aaPredicted RBP13.75□□□□□ -0.21
CPNE4-206ENST00000505957 TRMT112Q9UI30 125 aaKnown RBP13.75□□□□□ -0.21
CPNE4-206ENST00000505957 TRIM35Q9UPQ4 493 aa13.75□□□□□ -0.21
CPNE4-206ENST00000505957 YDJCA8MPS7 323 aa13.74□□□□□ -0.21
CPNE4-206ENST00000505957 LMOD3Q0VAK6 560 aa13.74□□□□□ -0.21
CPNE4-206ENST00000505957 MYH16Q9H6N6 1097 aa13.74□□□□□ -0.21
CPNE4-206ENST00000505957 ANXA1P04083 346 aa13.73□□□□□ -0.21
CPNE4-206ENST00000505957 RIPK4P57078 832 aa13.73□□□□□ -0.21
CPNE4-206ENST00000505957 CALD1Q05682 793 aaKnown RBP13.73□□□□□ -0.21
CPNE4-206ENST00000505957 MICALL2Q8IY33 904 aa13.73□□□□□ -0.21
CPNE4-206ENST00000505957 XAGE3Q8WTP9 111 aa13.73□□□□□ -0.21
CPNE4-206ENST00000505957 ZNF408Q9H9D4 720 aa13.73□□□□□ -0.21
CPNE4-206ENST00000505957 HUNKP57058 714 aa13.72□□□□□ -0.21
CPNE4-206ENST00000505957 WASHC4Q2M389 1173 aa13.72□□□□□ -0.21
CPNE4-206ENST00000505957 USP48Q86UV5 1035 aa13.72□□□□□ -0.21
CPNE4-206ENST00000505957 ANKRD36CQ5JPF3 1778 aa13.71□□□□□ -0.21
CPNE4-206ENST00000505957 SHTN1A0MZ66 631 aa13.71□□□□□ -0.21
CPNE4-206ENST00000505957 RPS12P25398 132 aaKnown RBP13.71□□□□□ -0.21
CPNE4-206ENST00000505957 AIMP1Q12904 312 aaKnown RBP13.71□□□□□ -0.21
CPNE4-206ENST00000505957 SF3B3Q15393 1217 aaKnown RBP13.71□□□□□ -0.21
CPNE4-206ENST00000505957 NEUROD2Q15784 382 aa13.71□□□□□ -0.21
CPNE4-206ENST00000505957 SAGE1Q9NXZ1 904 aa13.71□□□□□ -0.21
CPNE4-206ENST00000505957 PPP4R2Q9NY27 417 aa13.71□□□□□ -0.21
CPNE4-206ENST00000505957 PSMD14O00487 310 aa13.7□□□□□ -0.22
CPNE4-206ENST00000505957 DGKZQ13574 1117 aa13.7□□□□□ -0.22
CPNE4-206ENST00000505957 RGMBQ6NW40 437 aa13.7□□□□□ -0.22
CPNE4-206ENST00000505957 KRT26Q7Z3Y9 468 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms