RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 CEP126Q9P2H0 1117 aa20.79■□□□□ 0.92
TRAPPC11-204ENST00000505676 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.79■□□□□ 0.92
TRAPPC11-204ENST00000505676 PALLDQ8WX93 1383 aa20.79■□□□□ 0.92
TRAPPC11-204ENST00000505676 PSMA5P28066 241 aa20.78■□□□□ 0.92
TRAPPC11-204ENST00000505676 ZNF330Q9Y3S2 320 aaPredicted RBP20.78■□□□□ 0.92
TRAPPC11-204ENST00000505676 NECTIN1Q15223 517 aa20.78■□□□□ 0.92
TRAPPC11-204ENST00000505676 IFIT5Q13325 482 aaKnown RBP20.77■□□□□ 0.92
TRAPPC11-204ENST00000505676 DBNDD2Q9BQY9 259 aa20.77■□□□□ 0.92
TRAPPC11-204ENST00000505676 FOXD4L1Q9NU39 408 aa20.77■□□□□ 0.92
TRAPPC11-204ENST00000505676 ZBTB1Q9Y2K1 713 aa20.77■□□□□ 0.92
TRAPPC11-204ENST00000505676 TRAK2O60296 914 aa20.77■□□□□ 0.91
TRAPPC11-204ENST00000505676 TTC14Q96N46 770 aa20.77■□□□□ 0.91
TRAPPC11-204ENST00000505676 RGL2O15211 777 aa20.76■□□□□ 0.91
TRAPPC11-204ENST00000505676 VPS53Q5VIR6 699 aa20.76■□□□□ 0.91
TRAPPC11-204ENST00000505676 DZIP3Q86Y13 1208 aaKnown RBP20.76■□□□□ 0.91
TRAPPC11-204ENST00000505676 KBTBD3Q8NAB2 608 aa20.76■□□□□ 0.91
TRAPPC11-204ENST00000505676 CCDC87Q9NVE4 849 aa20.76■□□□□ 0.91
TRAPPC11-204ENST00000505676 ISY1Q9ULR0 285 aaKnown RBP20.76■□□□□ 0.91
TRAPPC11-204ENST00000505676 TSGA10IPQ3SY00 556 aa20.76■□□□□ 0.91
TRAPPC11-204ENST00000505676 TAF7LQ5H9L4 462 aa20.76■□□□□ 0.91
TRAPPC11-204ENST00000505676 ZSCAN31Q96LW9 406 aaPredicted RBP20.76■□□□□ 0.91
TRAPPC11-204ENST00000505676 EIF5P55010 431 aaKnown RBP20.75■□□□□ 0.91
TRAPPC11-204ENST00000505676 KRT32Q14532 448 aa20.75■□□□□ 0.91
TRAPPC11-204ENST00000505676 VPS72Q15906 364 aa20.75■□□□□ 0.91
TRAPPC11-204ENST00000505676 MARCH10Q8NA82 808 aaPredicted RBP20.75■□□□□ 0.91
TRAPPC11-204ENST00000505676 SH3TC1Q8TE82 1336 aa20.75■□□□□ 0.91
TRAPPC11-204ENST00000505676 ZSWIM6Q9HCJ5 1215 aa20.75■□□□□ 0.91
TRAPPC11-204ENST00000505676 RBM8AQ9Y5S9 174 aaKnown RBP20.75■□□□□ 0.91
TRAPPC11-204ENST00000505676 PDIA4P13667 645 aaKnown RBP20.74■□□□□ 0.91
TRAPPC11-204ENST00000505676 KCNJ4P48050 445 aa20.74■□□□□ 0.91
TRAPPC11-204ENST00000505676 LIMCH1Q9UPQ0 1083 aa20.74■□□□□ 0.91
TRAPPC11-204ENST00000505676 CYP46A1Q9Y6A2 500 aa20.74■□□□□ 0.91
TRAPPC11-204ENST00000505676 PTH1RQ03431 593 aa20.74■□□□□ 0.91
TRAPPC11-204ENST00000505676 ZNF34Q8IZ26 560 aa20.74■□□□□ 0.91
TRAPPC11-204ENST00000505676 FAM227BQ96M60 508 aa20.74■□□□□ 0.91
TRAPPC11-204ENST00000505676 SH2B1Q9NRF2 756 aaPredicted RBP20.74■□□□□ 0.91
TRAPPC11-204ENST00000505676 NUTM2BA6NNL0 878 aaPredicted RBP20.73■□□□□ 0.91
TRAPPC11-204ENST00000505676 NUTM2EB1AL46 878 aaPredicted RBP20.73■□□□□ 0.91
TRAPPC11-204ENST00000505676 PDE8AO60658 829 aa20.73■□□□□ 0.91
TRAPPC11-204ENST00000505676 SSFA2P28290 1259 aa20.73■□□□□ 0.91
TRAPPC11-204ENST00000505676 CTSWP56202 376 aa20.73■□□□□ 0.91
TRAPPC11-204ENST00000505676 PARP10Q53GL7 1025 aa20.73■□□□□ 0.91
TRAPPC11-204ENST00000505676 NUTM2AQ8IVF1 878 aaPredicted RBP20.73■□□□□ 0.91
TRAPPC11-204ENST00000505676 UPF3BQ9BZI7 483 aaKnown RBP20.73■□□□□ 0.91
TRAPPC11-204ENST00000505676 ALDH8A1Q9H2A2 487 aaPredicted RBP20.73■□□□□ 0.91
TRAPPC11-204ENST00000505676 HELLSQ9NRZ9 838 aa20.73■□□□□ 0.91
TRAPPC11-204ENST00000505676 LOC102724428A0A0B4J2F2 783 aa20.73■□□□□ 0.91
TRAPPC11-204ENST00000505676 A0A0D9SFI3 127 aa20.73■□□□□ 0.91
TRAPPC11-204ENST00000505676 SIK1P57059 783 aa20.73■□□□□ 0.91
TRAPPC11-204ENST00000505676 ANKRD1Q15327 319 aa20.73■□□□□ 0.91
TRAPPC11-204ENST00000505676 CCDC158Q5M9N0 1113 aa20.73■□□□□ 0.91
TRAPPC11-204ENST00000505676 USPL1Q5W0Q7 1092 aa20.73■□□□□ 0.91
TRAPPC11-204ENST00000505676 CREB3L3Q68CJ9 461 aa20.73■□□□□ 0.91
TRAPPC11-204ENST00000505676 FAM89AQ96GI7 184 aa20.73■□□□□ 0.91
TRAPPC11-204ENST00000505676 NEUROD6Q96NK8 337 aa20.73■□□□□ 0.91
TRAPPC11-204ENST00000505676 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.73■□□□□ 0.91
TRAPPC11-204ENST00000505676 NUP98P52948 1817 aa20.72■□□□□ 0.91
TRAPPC11-204ENST00000505676 A0A1B0GUL7 405 aa20.72■□□□□ 0.91
TRAPPC11-204ENST00000505676 ANKRD18BA2A2Z9 1011 aa20.72■□□□□ 0.91
TRAPPC11-204ENST00000505676 BAG4O95429 457 aaKnown RBP20.72■□□□□ 0.91
TRAPPC11-204ENST00000505676 HLFQ16534 295 aa20.72■□□□□ 0.91
TRAPPC11-204ENST00000505676 MCMDC2Q4G0Z9 681 aa20.72■□□□□ 0.91
TRAPPC11-204ENST00000505676 L1TD1Q5T7N2 865 aaKnown RBP20.72■□□□□ 0.91
TRAPPC11-204ENST00000505676 PRPF40BQ6NWY9 871 aaKnown RBP20.72■□□□□ 0.91
TRAPPC11-204ENST00000505676 RASEFQ8IZ41 740 aa20.72■□□□□ 0.91
TRAPPC11-204ENST00000505676 CCDC9Q9Y3X0 531 aaKnown RBP20.72■□□□□ 0.91
TRAPPC11-204ENST00000505676 U3KPZ7 1027 aaPredicted RBP20.72■□□□□ 0.91
TRAPPC11-204ENST00000505676 RPAP1Q9BWH6 1393 aaPredicted RBP20.72■□□□□ 0.91
TRAPPC11-204ENST00000505676 PIP4K2BP78356 416 aa20.72■□□□□ 0.91
TRAPPC11-204ENST00000505676 LRRC24Q50LG9 513 aa20.72■□□□□ 0.91
TRAPPC11-204ENST00000505676 ARXQ96QS3 562 aa20.72■□□□□ 0.91
TRAPPC11-204ENST00000505676 PAG1Q9NWQ8 432 aa20.72■□□□□ 0.91
TRAPPC11-204ENST00000505676 MYH3P11055 1940 aa20.71■□□□□ 0.91
TRAPPC11-204ENST00000505676 SPATA31A6Q5VVP1 1343 aa20.71■□□□□ 0.91
TRAPPC11-204ENST00000505676 CASTP20810 708 aaKnown RBP20.71■□□□□ 0.91
TRAPPC11-204ENST00000505676 ATP6V1AP38606 617 aa20.71■□□□□ 0.91
TRAPPC11-204ENST00000505676 ZGPATQ8N5A5 531 aaKnown RBP20.71■□□□□ 0.91
TRAPPC11-204ENST00000505676 TRMT112Q9UI30 125 aaKnown RBP20.71■□□□□ 0.91
TRAPPC11-204ENST00000505676 IRS4O14654 1257 aaPredicted RBP20.7■□□□□ 0.9
TRAPPC11-204ENST00000505676 INTS5Q6P9B9 1019 aaKnown RBP20.7■□□□□ 0.9
TRAPPC11-204ENST00000505676 RUFY3Q7L099 469 aa20.7■□□□□ 0.9
TRAPPC11-204ENST00000505676 TTLL11Q8NHH1 800 aa20.7■□□□□ 0.9
TRAPPC11-204ENST00000505676 DNAJC2Q99543 621 aaKnown RBP20.7■□□□□ 0.9
TRAPPC11-204ENST00000505676 SLC27A2O14975 620 aa20.7■□□□□ 0.9
TRAPPC11-204ENST00000505676 TAF5LO75529 589 aa20.7■□□□□ 0.9
TRAPPC11-204ENST00000505676 IFIT1P09914 478 aaKnown RBP20.7■□□□□ 0.9
TRAPPC11-204ENST00000505676 JAKMIP1Q96N16 626 aaKnown RBP20.7■□□□□ 0.9
TRAPPC11-204ENST00000505676 PDRG1Q9NUG6 133 aa20.7■□□□□ 0.9
TRAPPC11-204ENST00000505676 ZFYP08048 801 aaPredicted RBP20.69■□□□□ 0.9
TRAPPC11-204ENST00000505676 CRKLP46109 303 aaKnown RBP20.69■□□□□ 0.9
TRAPPC11-204ENST00000505676 ZNF512BQ96KM6 892 aaPredicted RBP20.69■□□□□ 0.9
TRAPPC11-204ENST00000505676 LRP5O75197 1615 aa20.69■□□□□ 0.9
TRAPPC11-204ENST00000505676 UBAP1LF5GYI3 381 aa20.69■□□□□ 0.9
TRAPPC11-204ENST00000505676 AK2P54819 239 aa20.69■□□□□ 0.9
TRAPPC11-204ENST00000505676 FNBP4Q8N3X1 1017 aaPredicted RBP20.69■□□□□ 0.9
TRAPPC11-204ENST00000505676 ZNF594Q96JF6 807 aaPredicted RBP20.69■□□□□ 0.9
TRAPPC11-204ENST00000505676 ZNF652Q9Y2D9 606 aa20.69■□□□□ 0.9
TRAPPC11-204ENST00000505676 BRD1O95696 1058 aa20.68■□□□□ 0.9
TRAPPC11-204ENST00000505676 ITGA6P23229 1130 aa20.68■□□□□ 0.9
TRAPPC11-204ENST00000505676 GPTP24298 496 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms