RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 DNAJC10Q8IXB1 793 aa9.75□□□□□ -0.85
VCAN-206ENST00000505615 CARD14Q9BXL6 1004 aa9.75□□□□□ -0.85
VCAN-206ENST00000505615 TAOK3Q9H2K8 898 aa9.75□□□□□ -0.85
VCAN-206ENST00000505615 UBR2Q8IWV8 1755 aa9.75□□□□□ -0.85
VCAN-206ENST00000505615 MRC1P22897 1456 aa9.74□□□□□ -0.85
VCAN-206ENST00000505615 ZNF530Q6P9A1 599 aaPredicted RBP9.74□□□□□ -0.85
VCAN-206ENST00000505615 MCOLN1Q9GZU1 580 aa9.74□□□□□ -0.85
VCAN-206ENST00000505615 POLKQ9UBT6 870 aa9.74□□□□□ -0.85
VCAN-206ENST00000505615 ZNF541Q9H0D2 1346 aa9.74□□□□□ -0.85
VCAN-206ENST00000505615 CYP19A1P11511 503 aaPredicted RBP9.73□□□□□ -0.85
VCAN-206ENST00000505615 EAPPQ56P03 285 aaPredicted RBP9.73□□□□□ -0.85
VCAN-206ENST00000505615 NFATC2IPQ8NCF5 419 aa9.73□□□□□ -0.85
VCAN-206ENST00000505615 ZNF622Q969S3 477 aaKnown RBP eCLIP9.73□□□□□ -0.85
VCAN-206ENST00000505615 TSKSQ9UJT2 592 aa9.73□□□□□ -0.85
VCAN-206ENST00000505615 ZBTB1Q9Y2K1 713 aa9.73□□□□□ -0.85
VCAN-206ENST00000505615 KCNC4Q03721 635 aa9.72□□□□□ -0.85
VCAN-206ENST00000505615 MAP1SQ66K74 1059 aaPredicted RBP9.72□□□□□ -0.85
VCAN-206ENST00000505615 CNTROBQ8N137 903 aa9.72□□□□□ -0.85
VCAN-206ENST00000505615 CAPNS2Q96L46 248 aa9.72□□□□□ -0.85
VCAN-206ENST00000505615 BCORQ6W2J9 1755 aa9.72□□□□□ -0.85
VCAN-206ENST00000505615 EPHX2P34913 555 aa9.71□□□□□ -0.86
VCAN-206ENST00000505615 MTHFSP49914 203 aa9.71□□□□□ -0.86
VCAN-206ENST00000505615 FMR1Q06787 632 aaKnown RBP eCLIP9.71□□□□□ -0.86
VCAN-206ENST00000505615 PLEKHO1Q53GL0 409 aaPredicted RBP9.71□□□□□ -0.86
VCAN-206ENST00000505615 PRR5LQ6MZQ0 368 aa9.71□□□□□ -0.86
VCAN-206ENST00000505615 PRPF40BQ6NWY9 871 aaKnown RBP9.71□□□□□ -0.86
VCAN-206ENST00000505615 BRIP1Q9BX63 1249 aa9.71□□□□□ -0.86
VCAN-206ENST00000505615 HACL1Q9UJ83 578 aa9.71□□□□□ -0.86
VCAN-206ENST00000505615 TSR3Q9UJK0 312 aaKnown RBP9.71□□□□□ -0.86
VCAN-206ENST00000505615 ABT1Q9ULW3 272 aaKnown RBP9.71□□□□□ -0.86
VCAN-206ENST00000505615 PDZRN3Q9UPQ7 1066 aa9.71□□□□□ -0.86
VCAN-206ENST00000505615 AMOTQ4VCS5 1084 aa9.7□□□□□ -0.86
VCAN-206ENST00000505615 TBC1D9BQ66K14 1250 aa9.7□□□□□ -0.86
VCAN-206ENST00000505615 CYP4F22Q6NT55 531 aa9.7□□□□□ -0.86
VCAN-206ENST00000505615 CCDC24Q8N4L8 307 aa9.7□□□□□ -0.86
VCAN-206ENST00000505615 C7orf43Q8WVR3 580 aa9.7□□□□□ -0.86
VCAN-206ENST00000505615 CFAP44Q96MT7 982 aa9.7□□□□□ -0.86
VCAN-206ENST00000505615 DDX21Q9NR30 783 aaKnown RBP eCLIP9.7□□□□□ -0.86
VCAN-206ENST00000505615 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.7□□□□□ -0.86
VCAN-206ENST00000505615 RNF123Q5XPI4 1314 aa9.7□□□□□ -0.86
VCAN-206ENST00000505615 COL4A5P29400 1685 aa9.69□□□□□ -0.86
VCAN-206ENST00000505615 PDE6BP35913 854 aa9.69□□□□□ -0.86
VCAN-206ENST00000505615 STYK1Q6J9G0 422 aa9.69□□□□□ -0.86
VCAN-206ENST00000505615 BICDL1Q6ZP65 573 aa9.69□□□□□ -0.86
VCAN-206ENST00000505615 AEBP1Q8IUX7 1158 aa9.69□□□□□ -0.86
VCAN-206ENST00000505615 GPR101Q96P66 508 aaPredicted RBP9.69□□□□□ -0.86
VCAN-206ENST00000505615 SNED1Q8TER0 1413 aa9.68□□□□□ -0.86
VCAN-206ENST00000505615 AOC2O75106 756 aa9.68□□□□□ -0.86
VCAN-206ENST00000505615 SRGNP10124 158 aa9.68□□□□□ -0.86
VCAN-206ENST00000505615 ECE1P42892 770 aa9.68□□□□□ -0.86
VCAN-206ENST00000505615 EIF5P55010 431 aaKnown RBP9.68□□□□□ -0.86
VCAN-206ENST00000505615 PDIA6Q15084 440 aa9.68□□□□□ -0.86
VCAN-206ENST00000505615 C1orf141Q5JVX7 400 aa9.68□□□□□ -0.86
VCAN-206ENST00000505615 SOGA3Q5TF21 947 aa9.68□□□□□ -0.86
VCAN-206ENST00000505615 PNMA8AQ86V59 439 aaPredicted RBP9.68□□□□□ -0.86
VCAN-206ENST00000505615 DDX12PQ92771 950 aa9.68□□□□□ -0.86
VCAN-206ENST00000505615 CNKSR1Q969H4 720 aa9.68□□□□□ -0.86
VCAN-206ENST00000505615 LRCH3Q96II8 777 aa9.68□□□□□ -0.86
VCAN-206ENST00000505615 BEGAINQ9BUH8 593 aa9.68□□□□□ -0.86
VCAN-206ENST00000505615 HPS5Q9UPZ3 1129 aa9.68□□□□□ -0.86
VCAN-206ENST00000505615 FKBP4Q02790 459 aaKnown RBP eCLIP9.67□□□□□ -0.86
VCAN-206ENST00000505615 SLC39A6Q13433 755 aa9.67□□□□□ -0.86
VCAN-206ENST00000505615 DGKZQ13574 1117 aa9.67□□□□□ -0.86
VCAN-206ENST00000505615 PRPF38BQ5VTL8 546 aaKnown RBP9.67□□□□□ -0.86
VCAN-206ENST00000505615 CST9Q5W186 159 aa9.67□□□□□ -0.86
VCAN-206ENST00000505615 SLC52A2Q9HAB3 445 aa9.67□□□□□ -0.86
VCAN-206ENST00000505615 ZNF277Q9NRM2 450 aaPredicted RBP9.67□□□□□ -0.86
VCAN-206ENST00000505615 TLL2Q9Y6L7 1015 aa9.67□□□□□ -0.86
VCAN-206ENST00000505615 FZD9O00144 591 aa9.66□□□□□ -0.86
VCAN-206ENST00000505615 MAP2K2P36507 400 aa9.66□□□□□ -0.86
VCAN-206ENST00000505615 GRM1Q13255 1194 aa9.66□□□□□ -0.86
VCAN-206ENST00000505615 TSR1Q2NL82 804 aaKnown RBP9.66□□□□□ -0.86
VCAN-206ENST00000505615 CCDC93Q567U6 631 aa9.66□□□□□ -0.86
VCAN-206ENST00000505615 OLFM4Q6UX06 510 aa9.66□□□□□ -0.86
VCAN-206ENST00000505615 PAXIP1Q6ZW49 1069 aaPredicted RBP9.66□□□□□ -0.86
VCAN-206ENST00000505615 MASTLQ96GX5 879 aa9.66□□□□□ -0.86
VCAN-206ENST00000505615 SIPA1L3O60292 1781 aaPredicted RBP9.65□□□□□ -0.86
VCAN-206ENST00000505615 TRAF5O00463 557 aa9.65□□□□□ -0.86
VCAN-206ENST00000505615 CA12O43570 354 aa9.65□□□□□ -0.86
VCAN-206ENST00000505615 CANXP27824 592 aaKnown RBP9.65□□□□□ -0.86
VCAN-206ENST00000505615 Q6ZNB5 142 aa9.65□□□□□ -0.86
VCAN-206ENST00000505615 VSIG10Q8N0Z9 540 aa9.65□□□□□ -0.86
VCAN-206ENST00000505615 LCE2BO14633 110 aa9.64□□□□□ -0.87
VCAN-206ENST00000505615 BRPF1P55201 1214 aaPredicted RBP9.64□□□□□ -0.87
VCAN-206ENST00000505615 SOX10P56693 466 aa9.64□□□□□ -0.87
VCAN-206ENST00000505615 NBR1Q14596 966 aa9.64□□□□□ -0.87
VCAN-206ENST00000505615 GPC2Q8N158 579 aa9.64□□□□□ -0.87
VCAN-206ENST00000505615 CNBD1Q8NA66 436 aa9.64□□□□□ -0.87
VCAN-206ENST00000505615 LGR6Q9HBX8 967 aa9.64□□□□□ -0.87
VCAN-206ENST00000505615 AKAP11Q9UKA4 1901 aa9.64□□□□□ -0.87
VCAN-206ENST00000505615 MKI67P46013 3256 aaKnown RBP9.63□□□□□ -0.87
VCAN-206ENST00000505615 A0A087WZG4 1122 aa9.63□□□□□ -0.87
VCAN-206ENST00000505615 RNMTO43148 476 aaKnown RBP9.63□□□□□ -0.87
VCAN-206ENST00000505615 CAMTA2O94983 1202 aa9.63□□□□□ -0.87
VCAN-206ENST00000505615 IARSP41252 1262 aaKnown RBP9.63□□□□□ -0.87
VCAN-206ENST00000505615 TNNT2P45379 298 aaPredicted RBP9.63□□□□□ -0.87
VCAN-206ENST00000505615 SCNN1DP51172 638 aa9.63□□□□□ -0.87
VCAN-206ENST00000505615 AKAP4Q5JQC9 854 aa9.63□□□□□ -0.87
VCAN-206ENST00000505615 KLRG2A4D1S0 409 aaPredicted RBP9.62□□□□□ -0.87
VCAN-206ENST00000505615 MAP3K7O43318 606 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms