RNA–Protein interactions for RNA: ENST00000505484.5

PRDM5-207, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best)

Gene PRDM5, Length 2,396 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-207ENST00000505484 PGBD1Q96JS3 809 aa18.69■□□□□ 0.58
PRDM5-207ENST00000505484 MIS18AQ9NYP9 233 aa18.69■□□□□ 0.58
PRDM5-207ENST00000505484 NALCNQ8IZF0 1738 aa18.69■□□□□ 0.58
PRDM5-207ENST00000505484 ARID5BQ14865 1188 aa18.68■□□□□ 0.58
PRDM5-207ENST00000505484 TEX35Q5T0J7 233 aa18.68■□□□□ 0.58
PRDM5-207ENST00000505484 BCL11BQ9C0K0 894 aaPredicted RBP18.68■□□□□ 0.58
PRDM5-207ENST00000505484 KCNJ6P48051 423 aa18.68■□□□□ 0.58
PRDM5-207ENST00000505484 DHX8Q14562 1220 aaKnown RBP18.68■□□□□ 0.58
PRDM5-207ENST00000505484 CCDC93Q567U6 631 aa18.68■□□□□ 0.58
PRDM5-207ENST00000505484 TFIP11Q9UBB9 837 aaKnown RBP18.68■□□□□ 0.58
PRDM5-207ENST00000505484 LMTK3Q96Q04 1460 aa18.67■□□□□ 0.58
PRDM5-207ENST00000505484 PPP1R42Q7Z4L9 355 aa18.67■□□□□ 0.58
PRDM5-207ENST00000505484 ORAI2Q96SN7 254 aa18.67■□□□□ 0.58
PRDM5-207ENST00000505484 OSBPL5Q9H0X9 879 aaPredicted RBP18.67■□□□□ 0.58
PRDM5-207ENST00000505484 IMPACTQ9P2X3 320 aa18.67■□□□□ 0.58
PRDM5-207ENST00000505484 RGPD1P0DJD0 1748 aa18.67■□□□□ 0.58
PRDM5-207ENST00000505484 PNMA6AP0CW24 399 aaPredicted RBP18.67■□□□□ 0.58
PRDM5-207ENST00000505484 CLCN6P51797 869 aa18.67■□□□□ 0.58
PRDM5-207ENST00000505484 SNW1Q13573 536 aaKnown RBP18.67■□□□□ 0.58
PRDM5-207ENST00000505484 MUM1L1Q5H9M0 696 aa18.67■□□□□ 0.58
PRDM5-207ENST00000505484 FILIP1Q7Z7B0 1213 aa18.67■□□□□ 0.58
PRDM5-207ENST00000505484 TRMT1Q9NXH9 659 aaKnown RBP18.67■□□□□ 0.58
PRDM5-207ENST00000505484 PSDA5PKW4 1024 aaPredicted RBP18.66■□□□□ 0.58
PRDM5-207ENST00000505484 ESCO1Q5FWF5 840 aa18.66■□□□□ 0.58
PRDM5-207ENST00000505484 CACNA1FO60840 1977 aa18.66■□□□□ 0.58
PRDM5-207ENST00000505484 FAM208AQ9UK61 1670 aaKnown RBP18.66■□□□□ 0.58
PRDM5-207ENST00000505484 PLEKHG3A1L390 1219 aa18.66■□□□□ 0.58
PRDM5-207ENST00000505484 ATP8B1O43520 1251 aa18.66■□□□□ 0.58
PRDM5-207ENST00000505484 TPM4P67936 248 aa18.66■□□□□ 0.58
PRDM5-207ENST00000505484 ERCC6LQ2NKX8 1250 aa18.66■□□□□ 0.58
PRDM5-207ENST00000505484 ARGLU1Q9NWB6 273 aaPredicted RBP18.66■□□□□ 0.58
PRDM5-207ENST00000505484 USP16Q9Y5T5 823 aa18.66■□□□□ 0.58
PRDM5-207ENST00000505484 BECN2A8MW95 431 aa18.65■□□□□ 0.58
PRDM5-207ENST00000505484 PLA2G4AP47712 749 aa18.65■□□□□ 0.58
PRDM5-207ENST00000505484 CREB3L3Q68CJ9 461 aa18.65■□□□□ 0.58
PRDM5-207ENST00000505484 C11orf57Q6ZUT1 292 aaPredicted RBP18.65■□□□□ 0.58
PRDM5-207ENST00000505484 TXLNBQ8N3L3 684 aa18.65■□□□□ 0.58
PRDM5-207ENST00000505484 FEZ2Q9UHY8 353 aaPredicted RBP18.65■□□□□ 0.58
PRDM5-207ENST00000505484 ZRANB2O95218 330 aaKnown RBP eCLIP18.64■□□□□ 0.58
PRDM5-207ENST00000505484 LARP1Q6PKG0 1096 aaKnown RBP18.64■□□□□ 0.58
PRDM5-207ENST00000505484 CFAP45Q9UL16 551 aa18.64■□□□□ 0.58
PRDM5-207ENST00000505484 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.64■□□□□ 0.57
PRDM5-207ENST00000505484 TOPAZ1Q8N9V7 1692 aa18.63■□□□□ 0.57
PRDM5-207ENST00000505484 DTNBO60941 627 aa18.63■□□□□ 0.57
PRDM5-207ENST00000505484 DDX17Q92841 729 aaKnown RBP18.63■□□□□ 0.57
PRDM5-207ENST00000505484 GTF3C6Q969F1 213 aa18.63■□□□□ 0.57
PRDM5-207ENST00000505484 ANO10Q9NW15 660 aa18.63■□□□□ 0.57
PRDM5-207ENST00000505484 RBM8AQ9Y5S9 174 aaKnown RBP18.63■□□□□ 0.57
PRDM5-207ENST00000505484 RAD51AP2Q09MP3 1159 aa18.63■□□□□ 0.57
PRDM5-207ENST00000505484 CCDC150Q8NCX0 1101 aa18.63■□□□□ 0.57
PRDM5-207ENST00000505484 MAP4K1Q92918 833 aa18.63■□□□□ 0.57
PRDM5-207ENST00000505484 ZSCAN16Q9H4T2 348 aaPredicted RBP18.63■□□□□ 0.57
PRDM5-207ENST00000505484 SNRKQ9NRH2 765 aa18.63■□□□□ 0.57
PRDM5-207ENST00000505484 USP6P35125 1406 aa18.63■□□□□ 0.57
PRDM5-207ENST00000505484 DHX40Q8IX18 779 aaKnown RBP18.62■□□□□ 0.57
PRDM5-207ENST00000505484 STRCP1A6NGW2 1772 aa18.62■□□□□ 0.57
PRDM5-207ENST00000505484 HIP1O00291 1037 aa18.62■□□□□ 0.57
PRDM5-207ENST00000505484 SRGAP3O43295 1099 aa18.62■□□□□ 0.57
PRDM5-207ENST00000505484 ADCY9O60503 1353 aa18.62■□□□□ 0.57
PRDM5-207ENST00000505484 AKAP12Q02952 1782 aa18.62■□□□□ 0.57
PRDM5-207ENST00000505484 RESTQ13127 1097 aa18.62■□□□□ 0.57
PRDM5-207ENST00000505484 MTHFSDQ2M296 383 aaKnown RBP18.62■□□□□ 0.57
PRDM5-207ENST00000505484 E4F1Q66K89 784 aaPredicted RBP18.62■□□□□ 0.57
PRDM5-207ENST00000505484 BLOC1S2Q6QNY1 142 aa18.62■□□□□ 0.57
PRDM5-207ENST00000505484 TMCO3Q6UWJ1 677 aa18.62■□□□□ 0.57
PRDM5-207ENST00000505484 EVI5LQ96CN4 794 aa18.62■□□□□ 0.57
PRDM5-207ENST00000505484 ARHGAP29Q52LW3 1261 aa18.61■□□□□ 0.57
PRDM5-207ENST00000505484 PPP1R13BQ96KQ4 1090 aa18.61■□□□□ 0.57
PRDM5-207ENST00000505484 SRRTQ9BXP5 876 aaKnown RBP18.61■□□□□ 0.57
PRDM5-207ENST00000505484 TRIM34Q9BYJ4 488 aa18.61■□□□□ 0.57
PRDM5-207ENST00000505484 FOXO3O43524 673 aa18.61■□□□□ 0.57
PRDM5-207ENST00000505484 TPM1P09493 284 aa18.61■□□□□ 0.57
PRDM5-207ENST00000505484 GPATCH3Q96I76 525 aa18.61■□□□□ 0.57
PRDM5-207ENST00000505484 UBXN6Q9BZV1 441 aa18.61■□□□□ 0.57
PRDM5-207ENST00000505484 NAT10Q9H0A0 1025 aaKnown RBP18.61■□□□□ 0.57
PRDM5-207ENST00000505484 ECHDC1Q9NTX5 307 aa18.61■□□□□ 0.57
PRDM5-207ENST00000505484 ZNF335Q9H4Z2 1342 aaPredicted RBP18.6■□□□□ 0.57
PRDM5-207ENST00000505484 SLC27A2O14975 620 aa18.6■□□□□ 0.57
PRDM5-207ENST00000505484 NRDCO43847 1150 aa18.6■□□□□ 0.57
PRDM5-207ENST00000505484 RPS6KB1P23443 525 aa18.6■□□□□ 0.57
PRDM5-207ENST00000505484 CEP57L1Q8IYX8 460 aa18.6■□□□□ 0.57
PRDM5-207ENST00000505484 NPHP1O15259 732 aa18.6■□□□□ 0.57
PRDM5-207ENST00000505484 EFCC1Q9HA90 598 aa18.6■□□□□ 0.57
PRDM5-207ENST00000505484 TMEM94Q12767 1356 aa18.59■□□□□ 0.57
PRDM5-207ENST00000505484 CCP110O43303 1012 aa18.59■□□□□ 0.57
PRDM5-207ENST00000505484 GPS2Q13227 327 aa18.59■□□□□ 0.57
PRDM5-207ENST00000505484 SYT10Q6XYQ8 523 aa18.59■□□□□ 0.57
PRDM5-207ENST00000505484 CLASRPQ8N2M8 674 aaKnown RBP18.59■□□□□ 0.57
PRDM5-207ENST00000505484 UBXN4Q92575 508 aa18.59■□□□□ 0.57
PRDM5-207ENST00000505484 BABAM1Q9NWV8 329 aa18.59■□□□□ 0.57
PRDM5-207ENST00000505484 ORC3Q9UBD5 711 aaPredicted RBP18.59■□□□□ 0.57
PRDM5-207ENST00000505484 PHF8Q9UPP1 1060 aa18.59■□□□□ 0.57
PRDM5-207ENST00000505484 PHLPP2Q6ZVD8 1323 aa18.59■□□□□ 0.57
PRDM5-207ENST00000505484 FMN2Q9NZ56 1722 aa18.58■□□□□ 0.57
PRDM5-207ENST00000505484 TOB2Q14106 344 aaPredicted RBP18.58■□□□□ 0.56
PRDM5-207ENST00000505484 TSGA10IPQ3SY00 556 aa18.58■□□□□ 0.56
PRDM5-207ENST00000505484 NBPF11Q86T75 865 aa18.58■□□□□ 0.56
PRDM5-207ENST00000505484 RCOR1Q9UKL0 485 aa18.58■□□□□ 0.56
PRDM5-207ENST00000505484 MAP3K19Q56UN5 1328 aa18.58■□□□□ 0.56
PRDM5-207ENST00000505484 HSP90AB2PQ58FF8 381 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms