RNA–Protein interactions for RNA: ENST00000505306.5

ITGA3-204, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 5,479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-204ENST00000505306 PLCG2P16885 1265 aa19.22■□□□□ 0.67
ITGA3-204ENST00000505306 PBRM1Q86U86 1689 aa19.22■□□□□ 0.67
ITGA3-204ENST00000505306 XRCC6P12956 609 aaKnown RBP eCLIP19.21■□□□□ 0.67
ITGA3-204ENST00000505306 PA2G4Q9UQ80 394 aaKnown RBP19.21■□□□□ 0.67
ITGA3-204ENST00000505306 CARD14Q9BXL6 1004 aa19.21■□□□□ 0.67
ITGA3-204ENST00000505306 CCDC87Q9NVE4 849 aa19.21■□□□□ 0.67
ITGA3-204ENST00000505306 UFL1O94874 794 aa19.21■□□□□ 0.67
ITGA3-204ENST00000505306 TNNI2P48788 182 aa19.21■□□□□ 0.67
ITGA3-204ENST00000505306 KRT24Q2M2I5 525 aa19.21■□□□□ 0.67
ITGA3-204ENST00000505306 RAB11FIP4Q86YS3 637 aa19.21■□□□□ 0.67
ITGA3-204ENST00000505306 YEATS2Q9ULM3 1422 aa19.21■□□□□ 0.67
ITGA3-204ENST00000505306 LDHBP07195 334 aaKnown RBP19.21■□□□□ 0.67
ITGA3-204ENST00000505306 ESR2Q92731 530 aa19.21■□□□□ 0.67
ITGA3-204ENST00000505306 TESK2Q96S53 571 aa19.21■□□□□ 0.67
ITGA3-204ENST00000505306 DDX21Q9NR30 783 aaKnown RBP eCLIP19.21■□□□□ 0.67
ITGA3-204ENST00000505306 SH3TC1Q8TE82 1336 aa19.21■□□□□ 0.67
ITGA3-204ENST00000505306 TMEM94Q12767 1356 aa19.21■□□□□ 0.67
ITGA3-204ENST00000505306 FAM89AQ96GI7 184 aa19.21■□□□□ 0.67
ITGA3-204ENST00000505306 QTRT2Q9H974 415 aaKnown RBP19.21■□□□□ 0.67
ITGA3-204ENST00000505306 TRAF1Q13077 416 aa19.2■□□□□ 0.66
ITGA3-204ENST00000505306 PLS1Q14651 629 aa19.2■□□□□ 0.66
ITGA3-204ENST00000505306 CCDC178Q5BJE1 867 aa19.2■□□□□ 0.66
ITGA3-204ENST00000505306 METAP2P50579 478 aaKnown RBP eCLIP19.2■□□□□ 0.66
ITGA3-204ENST00000505306 CBX1P83916 185 aa19.2■□□□□ 0.66
ITGA3-204ENST00000505306 NUP62CLQ9H1M0 184 aa19.2■□□□□ 0.66
ITGA3-204ENST00000505306 MYO6Q9UM54 1294 aa19.2■□□□□ 0.66
ITGA3-204ENST00000505306 MAGEB6P1A0A0J9YX57 407 aa19.2■□□□□ 0.66
ITGA3-204ENST00000505306 WTAPQ15007 396 aa19.2■□□□□ 0.66
ITGA3-204ENST00000505306 ZNF408Q9H9D4 720 aa19.2■□□□□ 0.66
ITGA3-204ENST00000505306 NEBLO76041 1014 aa19.2■□□□□ 0.66
ITGA3-204ENST00000505306 KRT23Q9C075 422 aa19.2■□□□□ 0.66
ITGA3-204ENST00000505306 HCLS1P14317 486 aaPredicted RBP19.19■□□□□ 0.66
ITGA3-204ENST00000505306 MRPL50Q8N5N7 158 aaKnown RBP19.19■□□□□ 0.66
ITGA3-204ENST00000505306 NEK1Q96PY6 1258 aa19.19■□□□□ 0.66
ITGA3-204ENST00000505306 EIF2AK4Q9P2K8 1649 aaKnown RBP19.19■□□□□ 0.66
ITGA3-204ENST00000505306 MAPKBP1O60336 1514 aa19.19■□□□□ 0.66
ITGA3-204ENST00000505306 SSFA2P28290 1259 aa19.19■□□□□ 0.66
ITGA3-204ENST00000505306 EIF6P56537 245 aaKnown RBP19.19■□□□□ 0.66
ITGA3-204ENST00000505306 TRPC5Q9UL62 973 aaPredicted RBP19.19■□□□□ 0.66
ITGA3-204ENST00000505306 LIMCH1Q9UPQ0 1083 aa19.19■□□□□ 0.66
ITGA3-204ENST00000505306 EIF5P55010 431 aaKnown RBP19.18■□□□□ 0.66
ITGA3-204ENST00000505306 LARGE2Q8N3Y3 721 aa19.18■□□□□ 0.66
ITGA3-204ENST00000505306 POLR3AO14802 1390 aaPredicted RBP19.18■□□□□ 0.66
ITGA3-204ENST00000505306 ATP8B2P98198 1209 aa19.18■□□□□ 0.66
ITGA3-204ENST00000505306 EDC4Q6P2E9 1401 aaKnown RBP19.18■□□□□ 0.66
ITGA3-204ENST00000505306 LARP6Q9BRS8 491 aaKnown RBP19.18■□□□□ 0.66
ITGA3-204ENST00000505306 POTEJP0CG39 1038 aa19.18■□□□□ 0.66
ITGA3-204ENST00000505306 PANK2Q9BZ23 570 aa19.18■□□□□ 0.66
ITGA3-204ENST00000505306 PLEKHH1Q9ULM0 1364 aa19.18■□□□□ 0.66
ITGA3-204ENST00000505306 MCM5P33992 734 aa19.18■□□□□ 0.66
ITGA3-204ENST00000505306 GPR162Q16538 588 aa19.18■□□□□ 0.66
ITGA3-204ENST00000505306 IFIT1BQ5T764 474 aaKnown RBP19.18■□□□□ 0.66
ITGA3-204ENST00000505306 SLC26A6Q9BXS9 759 aa19.18■□□□□ 0.66
ITGA3-204ENST00000505306 MCM9Q9NXL9 1143 aa19.18■□□□□ 0.66
ITGA3-204ENST00000505306 TBC1D32Q96NH3 1257 aa19.17■□□□□ 0.66
ITGA3-204ENST00000505306 TSG101Q99816 390 aa19.17■□□□□ 0.66
ITGA3-204ENST00000505306 CBFA2T2O43439 604 aa19.17■□□□□ 0.66
ITGA3-204ENST00000505306 DNAJC10Q8IXB1 793 aa19.17■□□□□ 0.66
ITGA3-204ENST00000505306 TXLNBQ8N3L3 684 aa19.17■□□□□ 0.66
ITGA3-204ENST00000505306 HMG20BQ9P0W2 317 aa19.17■□□□□ 0.66
ITGA3-204ENST00000505306 SLC52A2Q9HAB3 445 aa19.17■□□□□ 0.66
ITGA3-204ENST00000505306 TCP11L1Q9NUJ3 509 aa19.17■□□□□ 0.66
ITGA3-204ENST00000505306 MIGA1Q8NAN2 632 aa19.16■□□□□ 0.66
ITGA3-204ENST00000505306 COL17A1Q9UMD9 1497 aaPredicted RBP19.16■□□□□ 0.66
ITGA3-204ENST00000505306 A1BGP04217 495 aa19.16■□□□□ 0.66
ITGA3-204ENST00000505306 CCDC24Q8N4L8 307 aa19.16■□□□□ 0.66
ITGA3-204ENST00000505306 ORC3Q9UBD5 711 aaPredicted RBP19.16■□□□□ 0.66
ITGA3-204ENST00000505306 CKAP2LQ8IYA6 745 aa19.16■□□□□ 0.66
ITGA3-204ENST00000505306 TSPYL6Q8N831 410 aa19.16■□□□□ 0.66
ITGA3-204ENST00000505306 PLBD2Q8NHP8 589 aa19.16■□□□□ 0.66
ITGA3-204ENST00000505306 CNNM2Q9H8M5 875 aa19.16■□□□□ 0.66
ITGA3-204ENST00000505306 GGA1Q9UJY5 639 aa19.16■□□□□ 0.66
ITGA3-204ENST00000505306 IGHDP01880 384 aa19.15■□□□□ 0.66
ITGA3-204ENST00000505306 DPP8Q6V1X1 898 aaPredicted RBP19.15■□□□□ 0.66
ITGA3-204ENST00000505306 PAG1Q9NWQ8 432 aa19.15■□□□□ 0.66
ITGA3-204ENST00000505306 SSR1P43307 286 aaKnown RBP19.15■□□□□ 0.66
ITGA3-204ENST00000505306 ZNF772Q68DY9 489 aaPredicted RBP19.15■□□□□ 0.66
ITGA3-204ENST00000505306 CALML4Q96GE6 196 aa19.15■□□□□ 0.66
ITGA3-204ENST00000505306 BIN2Q9UBW5 565 aaPredicted RBP19.15■□□□□ 0.66
ITGA3-204ENST00000505306 PIK3C2GO75747 1445 aa19.15■□□□□ 0.66
ITGA3-204ENST00000505306 MAST1Q9Y2H9 1570 aa19.15■□□□□ 0.66
ITGA3-204ENST00000505306 CCP110O43303 1012 aa19.15■□□□□ 0.66
ITGA3-204ENST00000505306 PPFIA3O75145 1194 aa19.15■□□□□ 0.66
ITGA3-204ENST00000505306 KLHL10Q6JEL2 608 aa19.14■□□□□ 0.66
ITGA3-204ENST00000505306 KIF20AO95235 890 aa19.14■□□□□ 0.65
ITGA3-204ENST00000505306 RXRBP28702 533 aa19.14■□□□□ 0.65
ITGA3-204ENST00000505306 MSL1Q68DK7 614 aa19.14■□□□□ 0.65
ITGA3-204ENST00000505306 MAGEB6Q8N7X4 407 aa19.14■□□□□ 0.65
ITGA3-204ENST00000505306 LGR6Q9HBX8 967 aa19.14■□□□□ 0.65
ITGA3-204ENST00000505306 ABCA5Q8WWZ7 1642 aa19.14■□□□□ 0.65
ITGA3-204ENST00000505306 C8orf34Q49A92 452 aa19.14■□□□□ 0.65
ITGA3-204ENST00000505306 TTC22Q5TAA0 569 aa19.14■□□□□ 0.65
ITGA3-204ENST00000505306 ANKRD44Q8N8A2 993 aa19.14■□□□□ 0.65
ITGA3-204ENST00000505306 MCMDC2Q4G0Z9 681 aa19.13■□□□□ 0.65
ITGA3-204ENST00000505306 TMTC2Q8N394 836 aa19.13■□□□□ 0.65
ITGA3-204ENST00000505306 B4DLN1 442 aa19.13■□□□□ 0.65
ITGA3-204ENST00000505306 IDEP14735 1019 aa19.13■□□□□ 0.65
ITGA3-204ENST00000505306 MRPL12P52815 198 aaKnown RBP19.13■□□□□ 0.65
ITGA3-204ENST00000505306 CCDC181Q5TID7 509 aa19.13■□□□□ 0.65
ITGA3-204ENST00000505306 TFCP2Q12800 502 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms