RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 TRIM37O94972 964 aa6.84□□□□□ -1.31
CDH9-203ENST00000505045 CSPP1Q1MSJ5 1256 aa6.84□□□□□ -1.31
CDH9-203ENST00000505045 RTL5Q5HYW3 569 aaPredicted RBP6.84□□□□□ -1.31
CDH9-203ENST00000505045 PTF1AQ7RTS3 328 aa6.84□□□□□ -1.31
CDH9-203ENST00000505045 RSPH6AQ9H0K4 717 aa6.84□□□□□ -1.31
CDH9-203ENST00000505045 ANKRD36BQ8N2N9 1353 aa6.83□□□□□ -1.32
CDH9-203ENST00000505045 FBLN1P23142 703 aa6.83□□□□□ -1.32
CDH9-203ENST00000505045 VEGFBP49765 207 aa6.83□□□□□ -1.32
CDH9-203ENST00000505045 TOM1L2Q6ZVM7 507 aa6.83□□□□□ -1.32
CDH9-203ENST00000505045 BAP1Q92560 729 aa6.83□□□□□ -1.32
CDH9-203ENST00000505045 OVOS2A0A0G2JMS6 1433 aa6.83□□□□□ -1.32
CDH9-203ENST00000505045 TNS2Q63HR2 1409 aa6.83□□□□□ -1.32
CDH9-203ENST00000505045 ANKRD26Q9UPS8 1709 aa6.83□□□□□ -1.32
CDH9-203ENST00000505045 NHSQ6T4R5 1651 aa6.83□□□□□ -1.32
CDH9-203ENST00000505045 NINLQ9Y2I6 1382 aa6.83□□□□□ -1.32
CDH9-203ENST00000505045 SF3B2Q13435 895 aaKnown RBP6.83□□□□□ -1.32
CDH9-203ENST00000505045 EZH2Q15910 746 aaKnown RBP6.83□□□□□ -1.32
CDH9-203ENST00000505045 KCNH5Q8NCM2 988 aa6.83□□□□□ -1.32
CDH9-203ENST00000505045 FAM117AQ9C073 453 aa6.83□□□□□ -1.32
CDH9-203ENST00000505045 MAP10Q9P2G4 905 aa6.83□□□□□ -1.32
CDH9-203ENST00000505045 H3BM21 787 aa6.82□□□□□ -1.32
CDH9-203ENST00000505045 RNF225M0QZC1 329 aaPredicted RBP6.82□□□□□ -1.32
CDH9-203ENST00000505045 BAG6P46379 1132 aa6.82□□□□□ -1.32
CDH9-203ENST00000505045 LINC01559Q495D7 138 aa6.82□□□□□ -1.32
CDH9-203ENST00000505045 SH3D19Q5HYK7 790 aa6.82□□□□□ -1.32
CDH9-203ENST00000505045 HDGFL2Q7Z4V5 671 aaPredicted RBP6.82□□□□□ -1.32
CDH9-203ENST00000505045 ZNF511Q8NB15 262 aa6.82□□□□□ -1.32
CDH9-203ENST00000505045 HPS1Q92902 700 aa6.82□□□□□ -1.32
CDH9-203ENST00000505045 THRAP3Q9Y2W1 955 aaKnown RBP6.82□□□□□ -1.32
CDH9-203ENST00000505045 BTAF1O14981 1849 aa6.82□□□□□ -1.32
CDH9-203ENST00000505045 DOT1LQ8TEK3 1739 aa6.82□□□□□ -1.32
CDH9-203ENST00000505045 SKIV2LQ15477 1246 aaKnown RBP6.81□□□□□ -1.32
CDH9-203ENST00000505045 FAM196AQ6ZSG2 479 aa6.81□□□□□ -1.32
CDH9-203ENST00000505045 MPNDQ8N594 471 aa6.81□□□□□ -1.32
CDH9-203ENST00000505045 MARCH10Q8NA82 808 aaPredicted RBP6.81□□□□□ -1.32
CDH9-203ENST00000505045 CAMKK2Q96RR4 588 aa6.81□□□□□ -1.32
CDH9-203ENST00000505045 POLR3EQ9NVU0 708 aa6.81□□□□□ -1.32
CDH9-203ENST00000505045 TERF2IPQ9NYB0 399 aa6.81□□□□□ -1.32
CDH9-203ENST00000505045 CASZ1Q86V15 1759 aa6.8□□□□□ -1.32
CDH9-203ENST00000505045 MEGF6O75095 1541 aa6.8□□□□□ -1.32
CDH9-203ENST00000505045 ADAM23O75077 832 aa6.8□□□□□ -1.32
CDH9-203ENST00000505045 CSB-PGBD3P0DP91 1061 aa6.8□□□□□ -1.32
CDH9-203ENST00000505045 PDE3BQ13370 1112 aa6.8□□□□□ -1.32
CDH9-203ENST00000505045 EHBP1Q8NDI1 1231 aa6.8□□□□□ -1.32
CDH9-203ENST00000505045 PUS7Q96PZ0 661 aaKnown RBP6.8□□□□□ -1.32
CDH9-203ENST00000505045 KRTAP4-12Q9BQ66 201 aa6.8□□□□□ -1.32
CDH9-203ENST00000505045 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.8□□□□□ -1.32
CDH9-203ENST00000505045 CARD10Q9BWT7 1032 aa6.8□□□□□ -1.32
CDH9-203ENST00000505045 MAP3K19Q56UN5 1328 aa6.8□□□□□ -1.32
CDH9-203ENST00000505045 CLSPNQ9HAW4 1339 aa6.8□□□□□ -1.32
CDH9-203ENST00000505045 NSD3Q9BZ95 1437 aa6.8□□□□□ -1.32
CDH9-203ENST00000505045 KAT6BQ8WYB5 2073 aa6.8□□□□□ -1.32
CDH9-203ENST00000505045 APBA3O96018 575 aa6.8□□□□□ -1.32
CDH9-203ENST00000505045 DDB1Q16531 1140 aa6.8□□□□□ -1.32
CDH9-203ENST00000505045 ANKRD24Q8TF21 1146 aa6.8□□□□□ -1.32
CDH9-203ENST00000505045 DDRGK1Q96HY6 314 aa6.8□□□□□ -1.32
CDH9-203ENST00000505045 CARD14Q9BXL6 1004 aa6.8□□□□□ -1.32
CDH9-203ENST00000505045 GGNBP2Q9H3C7 697 aa6.8□□□□□ -1.32
CDH9-203ENST00000505045 PAPPAQ13219 1627 aa6.8□□□□□ -1.32
CDH9-203ENST00000505045 CCDC7Q96M83 1385 aa6.8□□□□□ -1.32
CDH9-203ENST00000505045 VARSP26640 1264 aaKnown RBP6.79□□□□□ -1.32
CDH9-203ENST00000505045 CTHP32929 405 aa6.79□□□□□ -1.32
CDH9-203ENST00000505045 TMF1P82094 1093 aa6.79□□□□□ -1.32
CDH9-203ENST00000505045 R3HDM1Q15032 1099 aaKnown RBP6.79□□□□□ -1.32
CDH9-203ENST00000505045 RRS1Q15050 365 aaKnown RBP6.79□□□□□ -1.32
CDH9-203ENST00000505045 PPP2R2DQ66LE6 453 aa6.79□□□□□ -1.32
CDH9-203ENST00000505045 MAP2P11137 1827 aaKnown RBP6.79□□□□□ -1.32
CDH9-203ENST00000505045 BCL9O00512 1426 aa6.79□□□□□ -1.32
CDH9-203ENST00000505045 TOGARAM1Q9Y4F4 1720 aa6.79□□□□□ -1.32
CDH9-203ENST00000505045 TUBGCP6Q96RT7 1819 aa6.78□□□□□ -1.32
CDH9-203ENST00000505045 FYB1O15117 783 aa6.78□□□□□ -1.32
CDH9-203ENST00000505045 ALDH1A1P00352 501 aa6.78□□□□□ -1.32
CDH9-203ENST00000505045 PROCA1Q8NCQ7 364 aaPredicted RBP6.78□□□□□ -1.32
CDH9-203ENST00000505045 LTV1Q96GA3 475 aaPredicted RBP6.78□□□□□ -1.32
CDH9-203ENST00000505045 DNMT3AQ9Y6K1 912 aaPredicted RBP6.78□□□□□ -1.32
CDH9-203ENST00000505045 PARD3Q8TEW0 1356 aa6.78□□□□□ -1.32
CDH9-203ENST00000505045 HOXC9P31274 260 aa6.78□□□□□ -1.32
CDH9-203ENST00000505045 FOXJ1Q92949 421 aa6.78□□□□□ -1.32
CDH9-203ENST00000505045 NLRP2Q9NX02 1062 aa6.78□□□□□ -1.32
CDH9-203ENST00000505045 RTL1A6NKG5 1358 aa6.77□□□□□ -1.33
CDH9-203ENST00000505045 KCNQ2O43526 872 aa6.77□□□□□ -1.33
CDH9-203ENST00000505045 C4orf48Q5BLP8 95 aa6.77□□□□□ -1.33
CDH9-203ENST00000505045 PKD1L3Q7Z443 1732 aa6.77□□□□□ -1.33
CDH9-203ENST00000505045 CCER1Q8TC90 406 aaPredicted RBP6.77□□□□□ -1.33
CDH9-203ENST00000505045 IP6K1Q92551 441 aa6.77□□□□□ -1.33
CDH9-203ENST00000505045 COG3Q96JB2 828 aa6.77□□□□□ -1.33
CDH9-203ENST00000505045 USHBP1Q8N6Y0 703 aa6.76□□□□□ -1.33
CDH9-203ENST00000505045 HELBQ8NG08 1087 aaPredicted RBP6.76□□□□□ -1.33
CDH9-203ENST00000505045 PDGFDQ9GZP0 370 aaPredicted RBP6.76□□□□□ -1.33
CDH9-203ENST00000505045 TIMELESSQ9UNS1 1208 aa6.76□□□□□ -1.33
CDH9-203ENST00000505045 TLL2Q9Y6L7 1015 aa6.76□□□□□ -1.33
CDH9-203ENST00000505045 LY75O60449 1722 aa6.76□□□□□ -1.33
CDH9-203ENST00000505045 HSPA5P11021 654 aaKnown RBP6.76□□□□□ -1.33
CDH9-203ENST00000505045 IL2RBP14784 551 aa6.76□□□□□ -1.33
CDH9-203ENST00000505045 CTDSPL2Q05D32 466 aa6.76□□□□□ -1.33
CDH9-203ENST00000505045 SH3RF1Q7Z6J0 888 aa6.76□□□□□ -1.33
CDH9-203ENST00000505045 ACSBG1Q96GR2 724 aa6.76□□□□□ -1.33
CDH9-203ENST00000505045 CDK15Q96Q40 435 aa6.76□□□□□ -1.33
CDH9-203ENST00000505045 CDCA7Q9BWT1 371 aaPredicted RBP6.76□□□□□ -1.33
CDH9-203ENST00000505045 NSD2O96028 1365 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms