RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 DBNLQ9UJU6 430 aaKnown RBP11.58□□□□□ -0.56
CSF1R-203ENST00000504875 SLC27A2O14975 620 aa11.57□□□□□ -0.56
CSF1R-203ENST00000504875 IFIT1P09914 478 aaKnown RBP11.57□□□□□ -0.56
CSF1R-203ENST00000504875 SEC62Q99442 399 aaKnown RBP11.57□□□□□ -0.56
CSF1R-203ENST00000504875 RBSNQ9H1K0 784 aa11.57□□□□□ -0.56
CSF1R-203ENST00000504875 MEGF6O75095 1541 aa11.57□□□□□ -0.56
CSF1R-203ENST00000504875 DNAJC5Q9H3Z4 198 aa11.57□□□□□ -0.56
CSF1R-203ENST00000504875 SH2B1Q9NRF2 756 aaPredicted RBP11.57□□□□□ -0.56
CSF1R-203ENST00000504875 PRDM4Q9UKN5 801 aa11.57□□□□□ -0.56
CSF1R-203ENST00000504875 PDIA4P13667 645 aaKnown RBP11.57□□□□□ -0.56
CSF1R-203ENST00000504875 MAPK8IP2Q13387 824 aaPredicted RBP11.57□□□□□ -0.56
CSF1R-203ENST00000504875 DNTTIP2Q5QJE6 756 aaKnown RBP11.57□□□□□ -0.56
CSF1R-203ENST00000504875 PTPN12Q05209 780 aaKnown RBP11.56□□□□□ -0.56
CSF1R-203ENST00000504875 TTC39AQ5SRH9 613 aa11.56□□□□□ -0.56
CSF1R-203ENST00000504875 VPS53Q5VIR6 699 aa11.56□□□□□ -0.56
CSF1R-203ENST00000504875 ZNF589Q86UQ0 364 aaPredicted RBP11.56□□□□□ -0.56
CSF1R-203ENST00000504875 KDM6AO15550 1401 aaPredicted RBP11.56□□□□□ -0.56
CSF1R-203ENST00000504875 CEBPZQ03701 1054 aaKnown RBP11.56□□□□□ -0.56
CSF1R-203ENST00000504875 DNM1Q05193 864 aaKnown RBP11.56□□□□□ -0.56
CSF1R-203ENST00000504875 ANKRD1Q15327 319 aa11.56□□□□□ -0.56
CSF1R-203ENST00000504875 TNS3Q68CZ2 1445 aa11.56□□□□□ -0.56
CSF1R-203ENST00000504875 F13A1P00488 732 aa11.56□□□□□ -0.56
CSF1R-203ENST00000504875 CHGBP05060 677 aa11.55□□□□□ -0.56
CSF1R-203ENST00000504875 ME3Q16798 604 aa11.55□□□□□ -0.56
CSF1R-203ENST00000504875 CCDC158Q5M9N0 1113 aa11.55□□□□□ -0.56
CSF1R-203ENST00000504875 LRSAM1Q6UWE0 723 aa11.55□□□□□ -0.56
CSF1R-203ENST00000504875 FAM89AQ96GI7 184 aa11.55□□□□□ -0.56
CSF1R-203ENST00000504875 ZNF335Q9H4Z2 1342 aaPredicted RBP11.55□□□□□ -0.56
CSF1R-203ENST00000504875 FAM173BQ6P4H8 233 aa11.55□□□□□ -0.56
CSF1R-203ENST00000504875 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.55□□□□□ -0.56
CSF1R-203ENST00000504875 CLEC17AQ6ZS10 378 aa11.55□□□□□ -0.56
CSF1R-203ENST00000504875 COPRSQ9NQ92 184 aa11.55□□□□□ -0.56
CSF1R-203ENST00000504875 WDR17Q8IZU2 1322 aa11.55□□□□□ -0.56
CSF1R-203ENST00000504875 EPB41L2O43491 1005 aaKnown RBP11.55□□□□□ -0.56
CSF1R-203ENST00000504875 APPP05067 770 aa11.55□□□□□ -0.56
CSF1R-203ENST00000504875 PDCP20941 246 aa11.55□□□□□ -0.56
CSF1R-203ENST00000504875 CNNM1Q9NRU3 951 aa11.55□□□□□ -0.56
CSF1R-203ENST00000504875 BTG4Q9NY30 223 aa11.55□□□□□ -0.56
CSF1R-203ENST00000504875 TFIP11Q9UBB9 837 aaKnown RBP11.55□□□□□ -0.56
CSF1R-203ENST00000504875 MST1RQ04912 1400 aa11.54□□□□□ -0.56
CSF1R-203ENST00000504875 UQCRHLA0A096LP55 91 aa11.54□□□□□ -0.56
CSF1R-203ENST00000504875 NBPF26B4DH59 902 aa11.54□□□□□ -0.56
CSF1R-203ENST00000504875 STARD3NLO95772 234 aa11.54□□□□□ -0.56
CSF1R-203ENST00000504875 UQCRHP07919 91 aa11.54□□□□□ -0.56
CSF1R-203ENST00000504875 ZNF445P59923 1031 aa11.54□□□□□ -0.56
CSF1R-203ENST00000504875 SLFNL1Q499Z3 407 aa11.54□□□□□ -0.56
CSF1R-203ENST00000504875 NBPF14Q5TI25 921 aa11.54□□□□□ -0.56
CSF1R-203ENST00000504875 NBPF10Q6P3W6 841 aaKnown RBP11.54□□□□□ -0.56
CSF1R-203ENST00000504875 DNAJC10Q8IXB1 793 aa11.54□□□□□ -0.56
CSF1R-203ENST00000504875 NBPF15Q8N660 670 aa11.54□□□□□ -0.56
CSF1R-203ENST00000504875 BICD2Q8TD16 824 aa11.54□□□□□ -0.56
CSF1R-203ENST00000504875 NEK1Q96PY6 1258 aa11.54□□□□□ -0.56
CSF1R-203ENST00000504875 CDK11BP21127 795 aaKnown RBP11.54□□□□□ -0.56
CSF1R-203ENST00000504875 KRT32Q14532 448 aa11.54□□□□□ -0.56
CSF1R-203ENST00000504875 MCMDC2Q4G0Z9 681 aa11.54□□□□□ -0.56
CSF1R-203ENST00000504875 LRRC24Q50LG9 513 aa11.54□□□□□ -0.56
CSF1R-203ENST00000504875 HSP90AB3PQ58FF7 597 aa11.54□□□□□ -0.56
CSF1R-203ENST00000504875 TPCN1Q9ULQ1 816 aa11.54□□□□□ -0.56
CSF1R-203ENST00000504875 KRT85P78386 507 aa11.54□□□□□ -0.56
CSF1R-203ENST00000504875 MAP4K1Q92918 833 aa11.54□□□□□ -0.56
CSF1R-203ENST00000504875 BRF1Q92994 677 aa11.54□□□□□ -0.56
CSF1R-203ENST00000504875 ZSWIM6Q9HCJ5 1215 aa11.54□□□□□ -0.56
CSF1R-203ENST00000504875 PAG1Q9NWQ8 432 aa11.54□□□□□ -0.56
CSF1R-203ENST00000504875 LRRC37A3O60309 1634 aa11.53□□□□□ -0.56
CSF1R-203ENST00000504875 ATP5JP18859 108 aa11.53□□□□□ -0.56
CSF1R-203ENST00000504875 MAP7D2Q96T17 732 aa11.53□□□□□ -0.56
CSF1R-203ENST00000504875 U3KPZ7 1027 aaPredicted RBP11.53□□□□□ -0.56
CSF1R-203ENST00000504875 HEG1Q9ULI3 1381 aa11.53□□□□□ -0.56
CSF1R-203ENST00000504875 IL15P40933 162 aaPredicted RBP11.53□□□□□ -0.56
CSF1R-203ENST00000504875 HAND2P61296 217 aa11.53□□□□□ -0.56
CSF1R-203ENST00000504875 CCT2P78371 535 aaKnown RBP11.53□□□□□ -0.56
CSF1R-203ENST00000504875 IFIT5Q13325 482 aaKnown RBP11.53□□□□□ -0.56
CSF1R-203ENST00000504875 NECTIN1Q15223 517 aa11.53□□□□□ -0.56
CSF1R-203ENST00000504875 METTL24Q5JXM2 366 aa11.53□□□□□ -0.56
CSF1R-203ENST00000504875 CHST3Q7LGC8 479 aa11.53□□□□□ -0.56
CSF1R-203ENST00000504875 TTC14Q96N46 770 aa11.53□□□□□ -0.56
CSF1R-203ENST00000504875 A0A1B0GUL7 405 aa11.53□□□□□ -0.56
CSF1R-203ENST00000504875 ADAMTS2O95450 1211 aa11.53□□□□□ -0.56
CSF1R-203ENST00000504875 Q6ZUG5 572 aa11.53□□□□□ -0.56
CSF1R-203ENST00000504875 PUS3Q9BZE2 481 aaKnown RBP11.53□□□□□ -0.56
CSF1R-203ENST00000504875 ASAP1Q9ULH1 1129 aa11.53□□□□□ -0.56
CSF1R-203ENST00000504875 USP42Q9H9J4 1324 aaKnown RBP11.52□□□□□ -0.56
CSF1R-203ENST00000504875 ERVV-2B6SEH9 535 aa11.52□□□□□ -0.56
CSF1R-203ENST00000504875 KDM4AO75164 1064 aa11.52□□□□□ -0.56
CSF1R-203ENST00000504875 HMG20BQ9P0W2 317 aa11.52□□□□□ -0.56
CSF1R-203ENST00000504875 RPS6KB1P23443 525 aa11.52□□□□□ -0.57
CSF1R-203ENST00000504875 CAMK4Q16566 473 aa11.52□□□□□ -0.57
CSF1R-203ENST00000504875 EYA2O00167 538 aa11.51□□□□□ -0.57
CSF1R-203ENST00000504875 CCDC183Q5T5S1 534 aa11.51□□□□□ -0.57
CSF1R-203ENST00000504875 GIMAP6Q6P9H5 292 aa11.51□□□□□ -0.57
CSF1R-203ENST00000504875 PLCD3Q8N3E9 789 aa11.51□□□□□ -0.57
CSF1R-203ENST00000504875 TM6SF1Q9BZW5 370 aa11.51□□□□□ -0.57
CSF1R-203ENST00000504875 TAF6LQ9Y6J9 622 aa11.51□□□□□ -0.57
CSF1R-203ENST00000504875 TAF5LO75529 589 aa11.51□□□□□ -0.57
CSF1R-203ENST00000504875 UBE2HP62256 183 aa11.51□□□□□ -0.57
CSF1R-203ENST00000504875 LRRFIP1Q32MZ4 808 aaKnown RBP11.51□□□□□ -0.57
CSF1R-203ENST00000504875 LDHAL6AQ6ZMR3 332 aa11.51□□□□□ -0.57
CSF1R-203ENST00000504875 CCDC191Q8NCU4 936 aa11.51□□□□□ -0.57
CSF1R-203ENST00000504875 TRMT112Q9UI30 125 aaKnown RBP11.51□□□□□ -0.57
CSF1R-203ENST00000504875 TBC1D2BQ9UPU7 963 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms