RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 EAPPQ56P03 285 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC13-206ENST00000504751 KRT25Q7Z3Z0 450 aa9.53□□□□□ -0.88
TRAPPC13-206ENST00000504751 RAB44Q7Z6P3 723 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC13-206ENST00000504751 GIPC2Q8TF65 315 aa9.53□□□□□ -0.88
TRAPPC13-206ENST00000504751 ZNF428Q96B54 188 aa9.53□□□□□ -0.88
TRAPPC13-206ENST00000504751 CHRDQ9H2X0 955 aa9.53□□□□□ -0.88
TRAPPC13-206ENST00000504751 ABI2Q9NYB9 513 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC13-206ENST00000504751 ERBB4Q15303 1308 aa9.53□□□□□ -0.88
TRAPPC13-206ENST00000504751 C2CD2LO14523 706 aa9.52□□□□□ -0.89
TRAPPC13-206ENST00000504751 TERTO14746 1132 aaKnown RBP9.52□□□□□ -0.89
TRAPPC13-206ENST00000504751 ZNF16P17020 682 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC13-206ENST00000504751 NFKB1P19838 968 aa9.52□□□□□ -0.89
TRAPPC13-206ENST00000504751 TARSP26639 723 aaKnown RBP9.52□□□□□ -0.89
TRAPPC13-206ENST00000504751 MAPK8P45983 427 aa9.52□□□□□ -0.89
TRAPPC13-206ENST00000504751 TAGLNQ01995 201 aaKnown RBP9.52□□□□□ -0.89
TRAPPC13-206ENST00000504751 EFCC1Q9HA90 598 aa9.52□□□□□ -0.89
TRAPPC13-206ENST00000504751 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC13-206ENST00000504751 PNMA6FA0A0J9YX94 578 aa9.51□□□□□ -0.89
TRAPPC13-206ENST00000504751 EIF1AYO14602 144 aaKnown RBP9.51□□□□□ -0.89
TRAPPC13-206ENST00000504751 MAP3K6O95382 1288 aa9.51□□□□□ -0.89
TRAPPC13-206ENST00000504751 RARAP10276 462 aa9.51□□□□□ -0.89
TRAPPC13-206ENST00000504751 CSRNP1Q96S65 589 aa9.51□□□□□ -0.89
TRAPPC13-206ENST00000504751 CNTN3Q9P232 1028 aa9.51□□□□□ -0.89
TRAPPC13-206ENST00000504751 MMP20O60882 483 aa9.5□□□□□ -0.89
TRAPPC13-206ENST00000504751 PHACTR2O75167 634 aa9.5□□□□□ -0.89
TRAPPC13-206ENST00000504751 NEFLP07196 543 aa9.5□□□□□ -0.89
TRAPPC13-206ENST00000504751 ZNF468Q5VIY5 522 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC13-206ENST00000504751 BHMTQ93088 406 aa9.5□□□□□ -0.89
TRAPPC13-206ENST00000504751 PNMA5Q96PV4 448 aa9.5□□□□□ -0.89
TRAPPC13-206ENST00000504751 SETDB2Q96T68 719 aa9.5□□□□□ -0.89
TRAPPC13-206ENST00000504751 DNAJC25Q9H1X3 360 aa9.5□□□□□ -0.89
TRAPPC13-206ENST00000504751 CPNE3O75131 537 aaKnown RBP9.49□□□□□ -0.89
TRAPPC13-206ENST00000504751 LDHBP07195 334 aaKnown RBP9.49□□□□□ -0.89
TRAPPC13-206ENST00000504751 BMP4P12644 408 aa9.49□□□□□ -0.89
TRAPPC13-206ENST00000504751 MX2P20592 715 aa9.49□□□□□ -0.89
TRAPPC13-206ENST00000504751 NFX1Q12986 1120 aaKnown RBP9.49□□□□□ -0.89
TRAPPC13-206ENST00000504751 RNFT1Q5M7Z0 435 aa9.49□□□□□ -0.89
TRAPPC13-206ENST00000504751 USPL1Q5W0Q7 1092 aa9.49□□□□□ -0.89
TRAPPC13-206ENST00000504751 C1orf127Q8N9H9 656 aa9.49□□□□□ -0.89
TRAPPC13-206ENST00000504751 OR13H1Q8NG92 308 aa9.49□□□□□ -0.89
TRAPPC13-206ENST00000504751 ZFYVE28Q9HCC9 887 aa9.49□□□□□ -0.89
TRAPPC13-206ENST00000504751 WWC3Q9ULE0 1092 aa9.49□□□□□ -0.89
TRAPPC13-206ENST00000504751 PRPF40AO75400 957 aaKnown RBP9.48□□□□□ -0.89
TRAPPC13-206ENST00000504751 HOXD8P13378 290 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC13-206ENST00000504751 TTC39BQ5VTQ0 682 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC13-206ENST00000504751 UNCXA6NJT0 531 aa9.47□□□□□ -0.89
TRAPPC13-206ENST00000504751 CYP2E1P05181 493 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC13-206ENST00000504751 SOX18P35713 384 aa9.47□□□□□ -0.89
TRAPPC13-206ENST00000504751 COL25A1Q9BXS0 654 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC13-206ENST00000504751 MBIPQ9NS73 344 aa9.47□□□□□ -0.89
TRAPPC13-206ENST00000504751 TLR7Q9NYK1 1049 aaKnown RBP9.47□□□□□ -0.89
TRAPPC13-206ENST00000504751 PRR12Q9ULL5 1215 aa9.47□□□□□ -0.89
TRAPPC13-206ENST00000504751 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC13-206ENST00000504751 EREGO14944 169 aa9.46□□□□□ -0.9
TRAPPC13-206ENST00000504751 RBM25P49756 843 aaKnown RBP9.46□□□□□ -0.9
TRAPPC13-206ENST00000504751 KRT76Q01546 638 aa9.46□□□□□ -0.9
TRAPPC13-206ENST00000504751 ATP2B2Q01814 1243 aa9.46□□□□□ -0.9
TRAPPC13-206ENST00000504751 NEUROD1Q13562 356 aa9.46□□□□□ -0.9
TRAPPC13-206ENST00000504751 LCE2CQ5TA81 110 aa9.46□□□□□ -0.9
TRAPPC13-206ENST00000504751 DHX32Q7L7V1 743 aaKnown RBP9.46□□□□□ -0.9
TRAPPC13-206ENST00000504751 SYT9Q86SS6 491 aa9.46□□□□□ -0.9
TRAPPC13-206ENST00000504751 FBF1Q8TES7 1133 aa9.46□□□□□ -0.9
TRAPPC13-206ENST00000504751 AVENQ9NQS1 362 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC13-206ENST00000504751 CES1P23141 567 aa9.45□□□□□ -0.9
TRAPPC13-206ENST00000504751 ZNF326Q5BKZ1 582 aaKnown RBP9.45□□□□□ -0.9
TRAPPC13-206ENST00000504751 ALG1LQ6GMV1 187 aa9.45□□□□□ -0.9
TRAPPC13-206ENST00000504751 SLC16A10Q8TF71 515 aa9.45□□□□□ -0.9
TRAPPC13-206ENST00000504751 KANSL3Q9P2N6 904 aa9.45□□□□□ -0.9
TRAPPC13-206ENST00000504751 KLF15Q9UIH9 416 aa9.45□□□□□ -0.9
TRAPPC13-206ENST00000504751 SIN3BO75182 1162 aa9.44□□□□□ -0.9
TRAPPC13-206ENST00000504751 POLR3DP05423 398 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC13-206ENST00000504751 ARAFP10398 606 aa9.44□□□□□ -0.9
TRAPPC13-206ENST00000504751 PCBP4P57723 403 aaKnown RBP9.44□□□□□ -0.9
TRAPPC13-206ENST00000504751 COL13A1Q5TAT6 717 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC13-206ENST00000504751 IRF7Q92985 503 aa9.44□□□□□ -0.9
TRAPPC13-206ENST00000504751 CCDC74AQ96AQ1 378 aa9.44□□□□□ -0.9
TRAPPC13-206ENST00000504751 MDFIQ99750 246 aa9.44□□□□□ -0.9
TRAPPC13-206ENST00000504751 DUSP9Q99956 384 aaKnown RBP9.44□□□□□ -0.9
TRAPPC13-206ENST00000504751 RNF19AQ9NV58 838 aa9.44□□□□□ -0.9
TRAPPC13-206ENST00000504751 IGF1RP08069 1367 aa9.43□□□□□ -0.9
TRAPPC13-206ENST00000504751 PSAPP07602 524 aa9.43□□□□□ -0.9
TRAPPC13-206ENST00000504751 IRS1P35568 1242 aa9.43□□□□□ -0.9
TRAPPC13-206ENST00000504751 MAP2K3P46734 347 aa9.43□□□□□ -0.9
TRAPPC13-206ENST00000504751 NRLP54845 237 aa9.43□□□□□ -0.9
TRAPPC13-206ENST00000504751 FGD1P98174 961 aa9.43□□□□□ -0.9
TRAPPC13-206ENST00000504751 PLAURQ03405 335 aa9.43□□□□□ -0.9
TRAPPC13-206ENST00000504751 GALNT12Q8IXK2 581 aa9.43□□□□□ -0.9
TRAPPC13-206ENST00000504751 TRPM4Q8TD43 1214 aa9.43□□□□□ -0.9
TRAPPC13-206ENST00000504751 PMEPA1Q969W9 287 aa9.43□□□□□ -0.9
TRAPPC13-206ENST00000504751 NSFL1CQ9UNZ2 370 aaKnown RBP9.43□□□□□ -0.9
TRAPPC13-206ENST00000504751 PHF20L1A8MW92 1017 aa9.42□□□□□ -0.9
TRAPPC13-206ENST00000504751 KIF4AO95239 1232 aa9.42□□□□□ -0.9
TRAPPC13-206ENST00000504751 ADH6P28332 368 aa9.42□□□□□ -0.9
TRAPPC13-206ENST00000504751 GPLD1P80108 840 aa9.42□□□□□ -0.9
TRAPPC13-206ENST00000504751 PI16Q6UXB8 463 aa9.42□□□□□ -0.9
TRAPPC13-206ENST00000504751 NPM2Q86SE8 214 aaKnown RBP9.42□□□□□ -0.9
TRAPPC13-206ENST00000504751 EPS8L3Q8TE67 593 aaKnown RBP9.42□□□□□ -0.9
TRAPPC13-206ENST00000504751 TNFRSF25Q93038 417 aa9.42□□□□□ -0.9
TRAPPC13-206ENST00000504751 NSUN5Q96P11 429 aaKnown RBP9.42□□□□□ -0.9
TRAPPC13-206ENST00000504751 NPHS2Q9NP85 383 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms