RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 SLC10A5Q5PT55 438 aa20.86■□□□□ 0.93
DDR1-250ENST00000503628 DPP8Q6V1X1 898 aaPredicted RBP20.86■□□□□ 0.93
DDR1-250ENST00000503628 CDC37L1Q7L3B6 337 aa20.86■□□□□ 0.93
DDR1-250ENST00000503628 TRPM4Q8TD43 1214 aa20.86■□□□□ 0.93
DDR1-250ENST00000503628 TNIP1Q15025 636 aa20.85■□□□□ 0.93
DDR1-250ENST00000503628 MPNDQ8N594 471 aa20.85■□□□□ 0.93
DDR1-250ENST00000503628 UTP14AQ9BVJ6 771 aaKnown RBP20.85■□□□□ 0.93
DDR1-250ENST00000503628 CDHR2Q9BYE9 1310 aa20.84■□□□□ 0.93
DDR1-250ENST00000503628 SHTN1A0MZ66 631 aa20.84■□□□□ 0.93
DDR1-250ENST00000503628 BBOX1O75936 387 aa20.84■□□□□ 0.93
DDR1-250ENST00000503628 KIAA2012Q0VF49 1180 aa20.84■□□□□ 0.93
DDR1-250ENST00000503628 SP8Q8IXZ3 490 aa20.84■□□□□ 0.93
DDR1-250ENST00000503628 THUMPD2Q9BTF0 503 aaKnown RBP20.84■□□□□ 0.93
DDR1-250ENST00000503628 CNOT7Q9UIV1 285 aaKnown RBP20.84■□□□□ 0.93
DDR1-250ENST00000503628 NOGQ13253 232 aa20.83■□□□□ 0.93
DDR1-250ENST00000503628 DLK2Q6UY11 383 aa20.83■□□□□ 0.93
DDR1-250ENST00000503628 USP48Q86UV5 1035 aa20.83■□□□□ 0.93
DDR1-250ENST00000503628 ZNF316A6NFI3 1004 aaPredicted RBP20.82■□□□□ 0.92
DDR1-250ENST00000503628 HUNKP57058 714 aa20.82■□□□□ 0.92
DDR1-250ENST00000503628 DDX10Q13206 875 aaKnown RBP20.82■□□□□ 0.92
DDR1-250ENST00000503628 LAMB2P55268 1798 aa20.82■□□□□ 0.92
DDR1-250ENST00000503628 YDJCA8MPS7 323 aa20.81■□□□□ 0.92
DDR1-250ENST00000503628 H7C1D1 291 aa20.81■□□□□ 0.92
DDR1-250ENST00000503628 NEFMP07197 916 aa20.81■□□□□ 0.92
DDR1-250ENST00000503628 HCLS1P14317 486 aaPredicted RBP20.81■□□□□ 0.92
DDR1-250ENST00000503628 LRP10Q7Z4F1 713 aa20.81■□□□□ 0.92
DDR1-250ENST00000503628 POLR2AP24928 1970 aaKnown RBP20.81■□□□□ 0.92
DDR1-250ENST00000503628 ERBB4Q15303 1308 aa20.8■□□□□ 0.92
DDR1-250ENST00000503628 TAF1P21675 1872 aa20.8■□□□□ 0.92
DDR1-250ENST00000503628 PDIA6Q15084 440 aa20.8■□□□□ 0.92
DDR1-250ENST00000503628 ANKRD36CQ5JPF3 1778 aa20.8■□□□□ 0.92
DDR1-250ENST00000503628 PDE4DIPQ5VU43 2346 aa20.79■□□□□ 0.92
DDR1-250ENST00000503628 MICALL2Q8IY33 904 aa20.79■□□□□ 0.92
DDR1-250ENST00000503628 ZBTB12Q9Y330 459 aaPredicted RBP20.79■□□□□ 0.92
DDR1-250ENST00000503628 ANXA1P04083 346 aa20.78■□□□□ 0.92
DDR1-250ENST00000503628 EIF2S2P20042 333 aaKnown RBP20.78■□□□□ 0.92
DDR1-250ENST00000503628 NFE2L2Q16236 605 aa20.78■□□□□ 0.92
DDR1-250ENST00000503628 DDX46Q7L014 1031 aaKnown RBP20.78■□□□□ 0.92
DDR1-250ENST00000503628 SAMD7Q7Z3H4 446 aa20.78■□□□□ 0.92
DDR1-250ENST00000503628 PLEKHF1Q96S99 279 aa20.78■□□□□ 0.92
DDR1-250ENST00000503628 FAM155AB1AL88 458 aaPredicted RBP20.77■□□□□ 0.92
DDR1-250ENST00000503628 GRAPQ13588 217 aa20.77■□□□□ 0.92
DDR1-250ENST00000503628 PROSER3Q2NL68 480 aa20.77■□□□□ 0.92
DDR1-250ENST00000503628 RGMBQ6NW40 437 aa20.77■□□□□ 0.92
DDR1-250ENST00000503628 GRAPLQ8TC17 118 aaPredicted RBP20.77■□□□□ 0.92
DDR1-250ENST00000503628 NLRP10Q86W26 655 aa20.76■□□□□ 0.91
DDR1-250ENST00000503628 TBC1D10BQ4KMP7 808 aaPredicted RBP20.75■□□□□ 0.91
DDR1-250ENST00000503628 KRT26Q7Z3Y9 468 aa20.75■□□□□ 0.91
DDR1-250ENST00000503628 DPF2Q92785 391 aa20.75■□□□□ 0.91
DDR1-250ENST00000503628 GBA2Q9HCG7 927 aaPredicted RBP20.75■□□□□ 0.91
DDR1-250ENST00000503628 TRMT112Q9UI30 125 aaKnown RBP20.75■□□□□ 0.91
DDR1-250ENST00000503628 PSMD14O00487 310 aa20.74■□□□□ 0.91
DDR1-250ENST00000503628 EGFRP00533 1210 aa20.74■□□□□ 0.91
DDR1-250ENST00000503628 SOX10P56693 466 aa20.74■□□□□ 0.91
DDR1-250ENST00000503628 KIF23Q02241 960 aaPredicted RBP20.74■□□□□ 0.91
DDR1-250ENST00000503628 C2orf69Q8N8R5 385 aa20.74■□□□□ 0.91
DDR1-250ENST00000503628 DUOX1Q9NRD9 1551 aa20.74■□□□□ 0.91
DDR1-250ENST00000503628 SAGE1Q9NXZ1 904 aa20.74■□□□□ 0.91
DDR1-250ENST00000503628 TSPYL4Q9UJ04 414 aa20.74■□□□□ 0.91
DDR1-250ENST00000503628 TRPA1O75762 1119 aa20.73■□□□□ 0.91
DDR1-250ENST00000503628 AIMP1Q12904 312 aaKnown RBP20.73■□□□□ 0.91
DDR1-250ENST00000503628 WASHC4Q2M389 1173 aa20.73■□□□□ 0.91
DDR1-250ENST00000503628 HSP90AB3PQ58FF7 597 aa20.73■□□□□ 0.91
DDR1-250ENST00000503628 RBM26Q5T8P6 1007 aaKnown RBP20.73■□□□□ 0.91
DDR1-250ENST00000503628 COPS6Q7L5N1 327 aa20.73■□□□□ 0.91
DDR1-250ENST00000503628 CCDC102AQ96A19 550 aa20.73■□□□□ 0.91
DDR1-250ENST00000503628 DBNDD1Q9H9R9 158 aa20.73■□□□□ 0.91
DDR1-250ENST00000503628 RNF186Q9NXI6 227 aa20.73■□□□□ 0.91
DDR1-250ENST00000503628 AKAP11Q9UKA4 1901 aa20.72■□□□□ 0.91
DDR1-250ENST00000503628 ADM5C9JUS6 153 aa20.72■□□□□ 0.91
DDR1-250ENST00000503628 ZNF157P51786 506 aaPredicted RBP20.72■□□□□ 0.91
DDR1-250ENST00000503628 TCIRG1Q13488 830 aa20.72■□□□□ 0.91
DDR1-250ENST00000503628 XAGE3Q8WTP9 111 aa20.72■□□□□ 0.91
DDR1-250ENST00000503628 NECTIN2Q92692 538 aa20.72■□□□□ 0.91
DDR1-250ENST00000503628 ZNF428Q96B54 188 aa20.72■□□□□ 0.91
DDR1-250ENST00000503628 SH3TC1Q8TE82 1336 aa20.72■□□□□ 0.91
DDR1-250ENST00000503628 RIMBP2O15034 1052 aa20.71■□□□□ 0.91
DDR1-250ENST00000503628 TMC4Q7Z404 712 aa20.71■□□□□ 0.91
DDR1-250ENST00000503628 DCPSQ96C86 337 aaKnown RBP20.71■□□□□ 0.91
DDR1-250ENST00000503628 KCNQ5Q9NR82 932 aa20.71■□□□□ 0.91
DDR1-250ENST00000503628 NSFL1CQ9UNZ2 370 aaKnown RBP20.71■□□□□ 0.91
DDR1-250ENST00000503628 LRRC37AA6NMS7 1700 aa20.7■□□□□ 0.9
DDR1-250ENST00000503628 C6orf229H3BNL8 230 aa20.69■□□□□ 0.9
DDR1-250ENST00000503628 CSRNP1Q96S65 589 aa20.69■□□□□ 0.9
DDR1-250ENST00000503628 POLLQ9UGP5 575 aa20.69■□□□□ 0.9
DDR1-250ENST00000503628 RPS12P25398 132 aaKnown RBP20.68■□□□□ 0.9
DDR1-250ENST00000503628 DOK7Q18PE1 504 aa20.68■□□□□ 0.9
DDR1-250ENST00000503628 MAPK8IP3Q9UPT6 1336 aa20.68■□□□□ 0.9
DDR1-250ENST00000503628 ECE2O60344 883 aa20.67■□□□□ 0.9
DDR1-250ENST00000503628 CELF1Q92879 486 aaKnown RBP20.67■□□□□ 0.9
DDR1-250ENST00000503628 PNNQ9H307 717 aaKnown RBP20.67■□□□□ 0.9
DDR1-250ENST00000503628 RTL9Q8NET4 1388 aa20.67■□□□□ 0.9
DDR1-250ENST00000503628 SLC10A3P09131 477 aa20.66■□□□□ 0.9
DDR1-250ENST00000503628 GPSM2P81274 684 aa20.66■□□□□ 0.9
DDR1-250ENST00000503628 DDX60Q8IY21 1712 aaKnown RBP20.66■□□□□ 0.9
DDR1-250ENST00000503628 ASTN2O75129 1339 aaPredicted RBP20.65■□□□□ 0.9
DDR1-250ENST00000503628 KIF4BQ2VIQ3 1234 aa20.65■□□□□ 0.9
DDR1-250ENST00000503628 CTU1Q7Z7A3 348 aaKnown RBP20.65■□□□□ 0.9
DDR1-250ENST00000503628 SULF1Q8IWU6 871 aa20.65■□□□□ 0.9
DDR1-250ENST00000503628 RIPK4P57078 832 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms