RNA–Protein interactions for RNA: ENST00000503580.1

LINC01060-202, Transcript of long intergenic non-protein coding RNA 1060, humanhuman

TSL 3

Gene LINC01060, Length 418 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01060-202ENST00000503580 C3orf67Q6ZVT6 689 aa16.88■□□□□ 0.29
LINC01060-202ENST00000503580 CCDC24Q8N4L8 307 aa16.88■□□□□ 0.29
LINC01060-202ENST00000503580 HOXA10P31260 410 aaPredicted RBP16.87■□□□□ 0.29
LINC01060-202ENST00000503580 TGFB2P61812 414 aa16.87■□□□□ 0.29
LINC01060-202ENST00000503580 ATP8B2P98198 1209 aa16.87■□□□□ 0.29
LINC01060-202ENST00000503580 TNRC6CQ9HCJ0 1690 aaKnown RBP16.87■□□□□ 0.29
LINC01060-202ENST00000503580 DDX60Q8IY21 1712 aaKnown RBP16.87■□□□□ 0.29
LINC01060-202ENST00000503580 HMMRO75330 724 aa16.86■□□□□ 0.29
LINC01060-202ENST00000503580 SRGNP10124 158 aa16.86■□□□□ 0.29
LINC01060-202ENST00000503580 POLA2Q14181 598 aa16.86■□□□□ 0.29
LINC01060-202ENST00000503580 FAM161AQ3B820 660 aa16.86■□□□□ 0.29
LINC01060-202ENST00000503580 SSH3Q8TE77 659 aa16.86■□□□□ 0.29
LINC01060-202ENST00000503580 GREM2Q9H772 168 aa16.86■□□□□ 0.29
LINC01060-202ENST00000503580 PCDHB15Q9Y5E8 787 aa16.86■□□□□ 0.29
LINC01060-202ENST00000503580 SRGAP3O43295 1099 aa16.85■□□□□ 0.29
LINC01060-202ENST00000503580 NPR1P16066 1061 aa16.85■□□□□ 0.29
LINC01060-202ENST00000503580 IFIT5Q13325 482 aaKnown RBP16.85■□□□□ 0.29
LINC01060-202ENST00000503580 STYK1Q6J9G0 422 aa16.85■□□□□ 0.29
LINC01060-202ENST00000503580 RPGRQ92834 1020 aaKnown RBP16.85■□□□□ 0.29
LINC01060-202ENST00000503580 PNMA6EA0A0J9YXQ4 647 aa16.84■□□□□ 0.29
LINC01060-202ENST00000503580 ANKRD18BA2A2Z9 1011 aa16.84■□□□□ 0.29
LINC01060-202ENST00000503580 H0YIN7 160 aa16.84■□□□□ 0.29
LINC01060-202ENST00000503580 ITGA6P23229 1130 aa16.84■□□□□ 0.29
LINC01060-202ENST00000503580 RFX5P48382 616 aaPredicted RBP16.84■□□□□ 0.29
LINC01060-202ENST00000503580 HDAC1Q13547 482 aaPredicted RBP16.84■□□□□ 0.29
LINC01060-202ENST00000503580 CCDC57Q2TAC2 916 aa16.84■□□□□ 0.29
LINC01060-202ENST00000503580 DDX46Q7L014 1031 aaKnown RBP16.84■□□□□ 0.29
LINC01060-202ENST00000503580 SIRT2Q8IXJ6 389 aa16.84■□□□□ 0.29
LINC01060-202ENST00000503580 MASTLQ96GX5 879 aa16.84■□□□□ 0.29
LINC01060-202ENST00000503580 RBM17Q96I25 401 aaKnown RBP16.84■□□□□ 0.29
LINC01060-202ENST00000503580 CRAMP1Q96RY5 1269 aa16.84■□□□□ 0.29
LINC01060-202ENST00000503580 CDC5LQ99459 802 aaKnown RBP16.84■□□□□ 0.29
LINC01060-202ENST00000503580 FBXO3Q9UK99 471 aa16.84■□□□□ 0.29
LINC01060-202ENST00000503580 LRP5O75197 1615 aa16.84■□□□□ 0.29
LINC01060-202ENST00000503580 GRAPQ13588 217 aa16.83■□□□□ 0.28
LINC01060-202ENST00000503580 C2CD5Q86YS7 1000 aa16.83■□□□□ 0.28
LINC01060-202ENST00000503580 GRAPLQ8TC17 118 aaPredicted RBP16.83■□□□□ 0.28
LINC01060-202ENST00000503580 COPRSQ9NQ92 184 aa16.83■□□□□ 0.28
LINC01060-202ENST00000503580 CHMP3Q9Y3E7 222 aa16.83■□□□□ 0.28
LINC01060-202ENST00000503580 KIF13BQ9NQT8 1826 aa16.82■□□□□ 0.28
LINC01060-202ENST00000503580 PTPN12Q05209 780 aaKnown RBP16.82■□□□□ 0.28
LINC01060-202ENST00000503580 ALDH1B1P30837 517 aa16.81■□□□□ 0.28
LINC01060-202ENST00000503580 TMC4Q7Z404 712 aa16.81■□□□□ 0.28
LINC01060-202ENST00000503580 CCDC85AQ96PX6 553 aaPredicted RBP16.81■□□□□ 0.28
LINC01060-202ENST00000503580 SEC31BQ9NQW1 1179 aa16.81■□□□□ 0.28
LINC01060-202ENST00000503580 NOP58Q9Y2X3 529 aaKnown RBP16.81■□□□□ 0.28
LINC01060-202ENST00000503580 ANKRD31Q8N7Z5 1873 aa16.81■□□□□ 0.28
LINC01060-202ENST00000503580 BBOX1O75936 387 aa16.8■□□□□ 0.28
LINC01060-202ENST00000503580 CIAO1O76071 339 aa16.8■□□□□ 0.28
LINC01060-202ENST00000503580 IGHMBP2P38935 993 aaKnown RBP16.8■□□□□ 0.28
LINC01060-202ENST00000503580 ANKRD18AQ8IVF6 992 aa16.8■□□□□ 0.28
LINC01060-202ENST00000503580 CNKSR1Q969H4 720 aa16.8■□□□□ 0.28
LINC01060-202ENST00000503580 DPEP1P16444 411 aa16.79■□□□□ 0.28
LINC01060-202ENST00000503580 KCNA3P22001 575 aa16.79■□□□□ 0.28
LINC01060-202ENST00000503580 CHRNA5P30532 468 aa16.79■□□□□ 0.28
LINC01060-202ENST00000503580 RPS8P62241 208 aaKnown RBP16.79■□□□□ 0.28
LINC01060-202ENST00000503580 TAF7LQ5H9L4 462 aa16.79■□□□□ 0.28
LINC01060-202ENST00000503580 CELF1Q92879 486 aaKnown RBP16.79■□□□□ 0.28
LINC01060-202ENST00000503580 RWDD1Q9H446 243 aaPredicted RBP16.79■□□□□ 0.28
LINC01060-202ENST00000503580 BSDC1Q9NW68 430 aaPredicted RBP16.79■□□□□ 0.28
LINC01060-202ENST00000503580 PPP1R1BQ9UD71 204 aaPredicted RBP16.79■□□□□ 0.28
LINC01060-202ENST00000503580 HSP90AB4PQ58FF6 505 aa16.78■□□□□ 0.28
LINC01060-202ENST00000503580 FHDC1Q9C0D6 1143 aaPredicted RBP16.78■□□□□ 0.28
LINC01060-202ENST00000503580 PPP4R2Q9NY27 417 aa16.78■□□□□ 0.28
LINC01060-202ENST00000503580 COL11A2P13942 1736 aaPredicted RBP16.78■□□□□ 0.28
LINC01060-202ENST00000503580 KIAA1551Q9HCM1 1747 aa16.77■□□□□ 0.28
LINC01060-202ENST00000503580 EYA2O00167 538 aa16.77■□□□□ 0.28
LINC01060-202ENST00000503580 ZNF622Q969S3 477 aaKnown RBP eCLIP16.77■□□□□ 0.28
LINC01060-202ENST00000503580 MPHOSPH8Q99549 860 aa16.77■□□□□ 0.28
LINC01060-202ENST00000503580 DCTPP1Q9H773 170 aa16.77■□□□□ 0.28
LINC01060-202ENST00000503580 A0A0G2JLW4 131 aa16.76■□□□□ 0.27
LINC01060-202ENST00000503580 PPEF1O14829 653 aaPredicted RBP16.76■□□□□ 0.27
LINC01060-202ENST00000503580 IL15P40933 162 aaPredicted RBP16.76■□□□□ 0.27
LINC01060-202ENST00000503580 LDHAL6AQ6ZMR3 332 aa16.76■□□□□ 0.27
LINC01060-202ENST00000503580 TTLL6Q8N841 843 aa16.76■□□□□ 0.27
LINC01060-202ENST00000503580 KLHDC4Q8TBB5 520 aa16.76■□□□□ 0.27
LINC01060-202ENST00000503580 GCC1Q96CN9 775 aa16.76■□□□□ 0.27
LINC01060-202ENST00000503580 ZNF594Q96JF6 807 aaPredicted RBP16.76■□□□□ 0.27
LINC01060-202ENST00000503580 PIM2Q9P1W9 311 aa16.76■□□□□ 0.27
LINC01060-202ENST00000503580 PA2G4Q9UQ80 394 aaKnown RBP16.76■□□□□ 0.27
LINC01060-202ENST00000503580 RIPOR2Q9Y4F9 1068 aa16.76■□□□□ 0.27
LINC01060-202ENST00000503580 MROH5Q6ZUA9 1318 aa16.75■□□□□ 0.27
LINC01060-202ENST00000503580 RAB11FIP3O75154 756 aa16.75■□□□□ 0.27
LINC01060-202ENST00000503580 SURF6O75683 361 aaKnown RBP16.75■□□□□ 0.27
LINC01060-202ENST00000503580 PRPF40BQ6NWY9 871 aaKnown RBP16.75■□□□□ 0.27
LINC01060-202ENST00000503580 ERC1Q8IUD2 1116 aa16.75■□□□□ 0.27
LINC01060-202ENST00000503580 SYT17Q9BSW7 474 aa16.75■□□□□ 0.27
LINC01060-202ENST00000503580 ATP6V0A2Q9Y487 856 aa16.75■□□□□ 0.27
LINC01060-202ENST00000503580 MYH3P11055 1940 aa16.74■□□□□ 0.27
LINC01060-202ENST00000503580 DLEC1Q9Y238 1755 aa16.74■□□□□ 0.27
LINC01060-202ENST00000503580 G3BP1Q13283 466 aaKnown RBP eCLIP16.74■□□□□ 0.27
LINC01060-202ENST00000503580 CC2D2BQ6DHV5 1058 aa16.74■□□□□ 0.27
LINC01060-202ENST00000503580 ATG9AQ7Z3C6 839 aa16.74■□□□□ 0.27
LINC01060-202ENST00000503580 SP8Q8IXZ3 490 aa16.74■□□□□ 0.27
LINC01060-202ENST00000503580 SMC5Q8IY18 1101 aa16.74■□□□□ 0.27
LINC01060-202ENST00000503580 KLHL34Q8N239 644 aa16.74■□□□□ 0.27
LINC01060-202ENST00000503580 NLGN2Q8NFZ4 835 aa16.74■□□□□ 0.27
LINC01060-202ENST00000503580 CNNM1Q9NRU3 951 aa16.74■□□□□ 0.27
LINC01060-202ENST00000503580 COL4A1P02462 1669 aa16.74■□□□□ 0.27
LINC01060-202ENST00000503580 KDM2BQ8NHM5 1336 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms